RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 AHDC1Q5TGY3 1603 aaPredicted RBP26.5■■□□□ 1.83
FAM3A-202ENST00000359889 HDGFL1Q5TGJ6 251 aa26.5■■□□□ 1.83
FAM3A-202ENST00000359889 ROBO1Q9Y6N7 1651 aa26.49■■□□□ 1.83
FAM3A-202ENST00000359889 DCAF5Q96JK2 942 aa26.48■■□□□ 1.83
FAM3A-202ENST00000359889 TOM1O60784 492 aa26.48■■□□□ 1.83
FAM3A-202ENST00000359889 STRN4Q9NRL3 753 aa26.48■■□□□ 1.83
FAM3A-202ENST00000359889 ABCA3Q99758 1704 aa26.47■■□□□ 1.83
FAM3A-202ENST00000359889 CCT4P50991 539 aaKnown RBP26.45■■□□□ 1.83
FAM3A-202ENST00000359889 SLC52A2Q9HAB3 445 aa26.45■■□□□ 1.83
FAM3A-202ENST00000359889 IL2RBP14784 551 aa26.45■■□□□ 1.82
FAM3A-202ENST00000359889 FLIIQ13045 1269 aa26.45■■□□□ 1.82
FAM3A-202ENST00000359889 ZCRB1Q8TBF4 217 aaKnown RBP26.44■■□□□ 1.82
FAM3A-202ENST00000359889 NECTIN2Q92692 538 aa26.44■■□□□ 1.82
FAM3A-202ENST00000359889 PCDH11XQ9BZA7 1347 aa26.44■■□□□ 1.82
FAM3A-202ENST00000359889 PCDH11YQ9BZA8 1340 aa26.44■■□□□ 1.82
FAM3A-202ENST00000359889 RGS12O14924 1447 aa26.43■■□□□ 1.82
FAM3A-202ENST00000359889 RGS3P49796 1198 aa26.43■■□□□ 1.82
FAM3A-202ENST00000359889 CYP27B1O15528 508 aa26.42■■□□□ 1.82
FAM3A-202ENST00000359889 FKBP5Q13451 457 aaPredicted RBP26.42■■□□□ 1.82
FAM3A-202ENST00000359889 G2E3Q7L622 706 aa26.42■■□□□ 1.82
FAM3A-202ENST00000359889 KCNQ3O43525 872 aa26.42■■□□□ 1.82
FAM3A-202ENST00000359889 EIF2S2P20042 333 aaKnown RBP26.42■■□□□ 1.82
FAM3A-202ENST00000359889 LARP1Q6PKG0 1096 aaKnown RBP26.42■■□□□ 1.82
FAM3A-202ENST00000359889 ADAMTS7Q9UKP4 1686 aa26.42■■□□□ 1.82
FAM3A-202ENST00000359889 KDM3BQ7LBC6 1761 aa26.41■■□□□ 1.82
FAM3A-202ENST00000359889 KDM6AO15550 1401 aaPredicted RBP26.41■■□□□ 1.82
FAM3A-202ENST00000359889 SKAP1Q86WV1 359 aa26.4■■□□□ 1.82
FAM3A-202ENST00000359889 BTG4Q9NY30 223 aa26.4■■□□□ 1.82
FAM3A-202ENST00000359889 PDE4AP27815 886 aa26.39■■□□□ 1.82
FAM3A-202ENST00000359889 SLC4A10Q6U841 1118 aa26.39■■□□□ 1.82
FAM3A-202ENST00000359889 PKD1L3Q7Z443 1732 aa26.39■■□□□ 1.81
FAM3A-202ENST00000359889 PDZRN3Q9UPQ7 1066 aa26.39■■□□□ 1.81
FAM3A-202ENST00000359889 GIGYF1O75420 1035 aaPredicted RBP26.38■■□□□ 1.81
FAM3A-202ENST00000359889 CABP4P57796 275 aa26.38■■□□□ 1.81
FAM3A-202ENST00000359889 ZNF790Q6PG37 636 aa26.38■■□□□ 1.81
FAM3A-202ENST00000359889 NFATC2IPQ8NCF5 419 aa26.38■■□□□ 1.81
FAM3A-202ENST00000359889 SMC5Q8IY18 1101 aa26.37■■□□□ 1.81
FAM3A-202ENST00000359889 DBF4Q9UBU7 674 aaPredicted RBP26.37■■□□□ 1.81
FAM3A-202ENST00000359889 PARP4Q9UKK3 1724 aaKnown RBP26.37■■□□□ 1.81
FAM3A-202ENST00000359889 TTC5Q8N0Z6 440 aa26.36■■□□□ 1.81
FAM3A-202ENST00000359889 COL22A1Q8NFW1 1626 aaPredicted RBP26.36■■□□□ 1.81
FAM3A-202ENST00000359889 HEG1Q9ULI3 1381 aa26.36■■□□□ 1.81
FAM3A-202ENST00000359889 F6X3S4 739 aa26.35■■□□□ 1.81
FAM3A-202ENST00000359889 GCC1Q96CN9 775 aa26.35■■□□□ 1.81
FAM3A-202ENST00000359889 BACH2Q9BYV9 841 aa26.35■■□□□ 1.81
FAM3A-202ENST00000359889 C1orf115Q9H7X2 142 aa26.35■■□□□ 1.81
FAM3A-202ENST00000359889 PIP4K2BP78356 416 aa26.34■■□□□ 1.81
FAM3A-202ENST00000359889 CHPF2Q9P2E5 772 aa26.34■■□□□ 1.81
FAM3A-202ENST00000359889 COL14A1Q05707 1796 aaKnown RBP26.34■■□□□ 1.81
FAM3A-202ENST00000359889 MRC1P22897 1456 aa26.34■■□□□ 1.81
FAM3A-202ENST00000359889 RPAP2Q8IXW5 612 aaPredicted RBP26.33■■□□□ 1.81
FAM3A-202ENST00000359889 ERVV-2B6SEH9 535 aa26.32■■□□□ 1.8
FAM3A-202ENST00000359889 FAM161AQ3B820 660 aa26.32■■□□□ 1.8
FAM3A-202ENST00000359889 NKX1-1Q15270 411 aaPredicted RBP26.31■■□□□ 1.8
FAM3A-202ENST00000359889 SCN11AQ9UI33 1791 aa26.31■■□□□ 1.8
FAM3A-202ENST00000359889 SIPA1L3O60292 1781 aaPredicted RBP26.31■■□□□ 1.8
FAM3A-202ENST00000359889 PXDNLA1KZ92 1463 aa26.3■■□□□ 1.8
FAM3A-202ENST00000359889 GNAI3P08754 354 aa26.3■■□□□ 1.8
FAM3A-202ENST00000359889 SLC39A6Q13433 755 aa26.3■■□□□ 1.8
FAM3A-202ENST00000359889 DDX54Q8TDD1 881 aaKnown RBP26.3■■□□□ 1.8
FAM3A-202ENST00000359889 PHAXQ9H814 394 aaKnown RBP26.3■■□□□ 1.8
FAM3A-202ENST00000359889 HYPKQ9NX55 129 aa26.3■■□□□ 1.8
FAM3A-202ENST00000359889 USP35Q9P2H5 1018 aa26.3■■□□□ 1.8
FAM3A-202ENST00000359889 PHLPP1O60346 1717 aa26.29■■□□□ 1.8
FAM3A-202ENST00000359889 UBAP1LF5GYI3 381 aa26.29■■□□□ 1.8
FAM3A-202ENST00000359889 FMNL2Q96PY5 1086 aa26.29■■□□□ 1.8
FAM3A-202ENST00000359889 MEIS3Q99687 375 aa26.29■■□□□ 1.8
FAM3A-202ENST00000359889 CACNA1FO60840 1977 aa26.28■■□□□ 1.8
FAM3A-202ENST00000359889 SNRPA1P09661 255 aaKnown RBP26.28■■□□□ 1.8
FAM3A-202ENST00000359889 ANKRD44Q8N8A2 993 aa26.28■■□□□ 1.8
FAM3A-202ENST00000359889 NUCB1Q02818 461 aa26.27■■□□□ 1.8
FAM3A-202ENST00000359889 COL16A1Q07092 1604 aaPredicted RBP26.27■■□□□ 1.8
FAM3A-202ENST00000359889 HMMRO75330 724 aa26.26■■□□□ 1.79
FAM3A-202ENST00000359889 GNAI2P04899 355 aa26.26■■□□□ 1.79
FAM3A-202ENST00000359889 DDX21Q9NR30 783 aaKnown RBP eCLIP26.26■■□□□ 1.79
FAM3A-202ENST00000359889 VIRMAQ69YN4 1812 aaKnown RBP26.26■■□□□ 1.79
FAM3A-202ENST00000359889 ZNF496Q96IT1 587 aaPredicted RBP26.25■■□□□ 1.79
FAM3A-202ENST00000359889 ADAMTS2O95450 1211 aa26.25■■□□□ 1.79
FAM3A-202ENST00000359889 DDX58O95786 925 aaKnown RBP26.25■■□□□ 1.79
FAM3A-202ENST00000359889 SIRT2Q8IXJ6 389 aa26.25■■□□□ 1.79
FAM3A-202ENST00000359889 DNAAF4Q8WXU2 420 aa26.25■■□□□ 1.79
FAM3A-202ENST00000359889 SRCIN1Q9C0H9 1055 aa26.25■■□□□ 1.79
FAM3A-202ENST00000359889 ZBTB47Q9UFB7 747 aaPredicted RBP26.24■■□□□ 1.79
FAM3A-202ENST00000359889 CEP85Q6P2H3 762 aa26.23■■□□□ 1.79
FAM3A-202ENST00000359889 CHD1LQ86WJ1 897 aa26.23■■□□□ 1.79
FAM3A-202ENST00000359889 CDCA7Q9BWT1 371 aaPredicted RBP26.22■■□□□ 1.79
FAM3A-202ENST00000359889 PI4KAP2A4QPH2 592 aa26.22■■□□□ 1.79
FAM3A-202ENST00000359889 ANP32AP39687 249 aaKnown RBP26.22■■□□□ 1.79
FAM3A-202ENST00000359889 ANKRD45Q5TZF3 282 aa26.22■■□□□ 1.79
FAM3A-202ENST00000359889 PI4KAP1Q8N8J0 262 aa26.22■■□□□ 1.79
FAM3A-202ENST00000359889 PRAMEF22A3QJZ6 481 aa26.21■■□□□ 1.79
FAM3A-202ENST00000359889 DCTPP1Q9H773 170 aa26.21■■□□□ 1.79
FAM3A-202ENST00000359889 ATP10DQ9P241 1426 aa26.21■■□□□ 1.79
FAM3A-202ENST00000359889 NUTM2BA6NNL0 878 aaPredicted RBP26.2■■□□□ 1.79
FAM3A-202ENST00000359889 NUTM2EB1AL46 878 aaPredicted RBP26.2■■□□□ 1.79
FAM3A-202ENST00000359889 ANXA1P04083 346 aa26.2■■□□□ 1.79
FAM3A-202ENST00000359889 KSR2Q6VAB6 950 aa26.2■■□□□ 1.79
FAM3A-202ENST00000359889 NUTM2AQ8IVF1 878 aaPredicted RBP26.2■■□□□ 1.79
FAM3A-202ENST00000359889 UBTFL1P0CB47 393 aaPredicted RBP26.19■■□□□ 1.78
FAM3A-202ENST00000359889 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms