RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 RIMS1Q86UR5 1692 aaKnown RBP11.46□□□□□ -0.58
GTF3C2-202ENST00000359541 FMN2Q9NZ56 1722 aa11.46□□□□□ -0.58
GTF3C2-202ENST00000359541 PLEKHO1Q53GL0 409 aaPredicted RBP11.45□□□□□ -0.58
GTF3C2-202ENST00000359541 F6X3S4 739 aa11.45□□□□□ -0.58
GTF3C2-202ENST00000359541 UBTFL1P0CB47 393 aaPredicted RBP11.45□□□□□ -0.58
GTF3C2-202ENST00000359541 C1orf141Q5JVX7 400 aa11.45□□□□□ -0.58
GTF3C2-202ENST00000359541 ATP10DQ9P241 1426 aa11.45□□□□□ -0.58
GTF3C2-202ENST00000359541 LRRCC1Q9C099 1032 aa11.44□□□□□ -0.58
GTF3C2-202ENST00000359541 RGS12O14924 1447 aa11.44□□□□□ -0.58
GTF3C2-202ENST00000359541 AMOTQ4VCS5 1084 aa11.44□□□□□ -0.58
GTF3C2-202ENST00000359541 SRCIN1Q9C0H9 1055 aa11.44□□□□□ -0.58
GTF3C2-202ENST00000359541 HOXB7P09629 217 aa11.43□□□□□ -0.58
GTF3C2-202ENST00000359541 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
GTF3C2-202ENST00000359541 G2E3Q7L622 706 aa11.43□□□□□ -0.58
GTF3C2-202ENST00000359541 NECTIN2Q92692 538 aa11.43□□□□□ -0.58
GTF3C2-202ENST00000359541 PIK3C2AO00443 1686 aa11.43□□□□□ -0.58
GTF3C2-202ENST00000359541 ERC2O15083 957 aa11.43□□□□□ -0.58
GTF3C2-202ENST00000359541 GSPT1P15170 499 aaKnown RBP11.43□□□□□ -0.58
GTF3C2-202ENST00000359541 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
GTF3C2-202ENST00000359541 ADGRL3Q9HAR2 1447 aa11.42□□□□□ -0.58
GTF3C2-202ENST00000359541 GOLGA6L3A6NEY3 463 aa11.42□□□□□ -0.58
GTF3C2-202ENST00000359541 SMARCA5O60264 1052 aaPredicted RBP11.42□□□□□ -0.58
GTF3C2-202ENST00000359541 SDSP20132 328 aa11.42□□□□□ -0.58
GTF3C2-202ENST00000359541 ZNF530Q6P9A1 599 aaPredicted RBP11.42□□□□□ -0.58
GTF3C2-202ENST00000359541 TRAK2O60296 914 aa11.41□□□□□ -0.58
GTF3C2-202ENST00000359541 HSP90AB4PQ58FF6 505 aa11.41□□□□□ -0.58
GTF3C2-202ENST00000359541 USHBP1Q8N6Y0 703 aa11.41□□□□□ -0.58
GTF3C2-202ENST00000359541 IL17REQ8NFR9 667 aa11.41□□□□□ -0.58
GTF3C2-202ENST00000359541 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
GTF3C2-202ENST00000359541 ATP8B2P98198 1209 aa11.41□□□□□ -0.58
GTF3C2-202ENST00000359541 AKAP4Q5JQC9 854 aa11.41□□□□□ -0.58
GTF3C2-202ENST00000359541 C16orf71Q8IYS4 520 aaPredicted RBP11.41□□□□□ -0.58
GTF3C2-202ENST00000359541 TRIM6-TRIM34B2RNG4 842 aa11.4□□□□□ -0.58
GTF3C2-202ENST00000359541 PDE1AP54750 535 aa11.4□□□□□ -0.58
GTF3C2-202ENST00000359541 NUCB2P80303 420 aa11.4□□□□□ -0.58
GTF3C2-202ENST00000359541 OSBPL3Q9H4L5 887 aa11.4□□□□□ -0.58
GTF3C2-202ENST00000359541 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.58
GTF3C2-202ENST00000359541 RAB11FIP3O75154 756 aa11.4□□□□□ -0.58
GTF3C2-202ENST00000359541 EXOC6BQ9Y2D4 811 aa11.4□□□□□ -0.58
GTF3C2-202ENST00000359541 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
GTF3C2-202ENST00000359541 MX1P20591 662 aa11.4□□□□□ -0.59
GTF3C2-202ENST00000359541 NCOA3Q9Y6Q9 1424 aa11.39□□□□□ -0.59
GTF3C2-202ENST00000359541 BTBD11A6QL63 1104 aa11.39□□□□□ -0.59
GTF3C2-202ENST00000359541 ZBTB22O15209 634 aa11.39□□□□□ -0.59
GTF3C2-202ENST00000359541 MCM2P49736 904 aa11.39□□□□□ -0.59
GTF3C2-202ENST00000359541 USP26Q9BXU7 913 aa11.39□□□□□ -0.59
GTF3C2-202ENST00000359541 CWC22Q9HCG8 908 aaKnown RBP11.39□□□□□ -0.59
GTF3C2-202ENST00000359541 LRRFIP2Q9Y608 721 aaKnown RBP11.39□□□□□ -0.59
GTF3C2-202ENST00000359541 RGPD8O14715 1765 aaPredicted RBP11.39□□□□□ -0.59
GTF3C2-202ENST00000359541 OS9Q13438 667 aaPredicted RBP11.38□□□□□ -0.59
GTF3C2-202ENST00000359541 GLIPR1L2Q4G1C9 344 aa11.38□□□□□ -0.59
GTF3C2-202ENST00000359541 NPHP4O75161 1426 aaPredicted RBP11.38□□□□□ -0.59
GTF3C2-202ENST00000359541 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
GTF3C2-202ENST00000359541 RAB3GAP1Q15042 981 aa11.38□□□□□ -0.59
GTF3C2-202ENST00000359541 PROSER2Q86WR7 435 aaPredicted RBP11.38□□□□□ -0.59
GTF3C2-202ENST00000359541 OTUD7AQ8TE49 926 aaPredicted RBP11.38□□□□□ -0.59
GTF3C2-202ENST00000359541 RILPL2Q969X0 211 aa11.38□□□□□ -0.59
GTF3C2-202ENST00000359541 GZF1Q9H116 711 aaPredicted RBP11.38□□□□□ -0.59
GTF3C2-202ENST00000359541 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 DNAAF4Q8WXU2 420 aa11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 TNPO1Q92973 898 aaKnown RBP11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 AOX1Q06278 1338 aa11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 NCAPD2Q15021 1401 aa11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 DDX58O95786 925 aaKnown RBP11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 GCP02774 474 aa11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 DBF4Q9UBU7 674 aaPredicted RBP11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 USP54Q70EL1 1684 aa11.37□□□□□ -0.59
GTF3C2-202ENST00000359541 SURF6O75683 361 aaKnown RBP11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 GPATCH3Q96I76 525 aa11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 KIF2CQ99661 725 aa11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 IBTKQ9P2D0 1353 aaPredicted RBP11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 EIF4A1P60842 406 aaKnown RBP11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 BRPF3Q9ULD4 1205 aa11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 CEMIPQ8WUJ3 1361 aa11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 PDE4CQ08493 712 aa11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 KIF1BPQ96EK5 621 aa11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 LRRC37A3O60309 1634 aa11.36□□□□□ -0.59
GTF3C2-202ENST00000359541 ANKRD24Q8TF21 1146 aa11.35□□□□□ -0.59
GTF3C2-202ENST00000359541 RAPGEF4Q8WZA2 1011 aa11.35□□□□□ -0.59
GTF3C2-202ENST00000359541 ANP32BQ92688 251 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-202ENST00000359541 ANO2Q9NQ90 1003 aa11.35□□□□□ -0.59
GTF3C2-202ENST00000359541 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
GTF3C2-202ENST00000359541 MRE11P49959 708 aa11.35□□□□□ -0.59
GTF3C2-202ENST00000359541 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-202ENST00000359541 SRGAP3O43295 1099 aa11.35□□□□□ -0.59
GTF3C2-202ENST00000359541 KRT28Q7Z3Y7 464 aa11.35□□□□□ -0.59
GTF3C2-202ENST00000359541 ATF3P18847 181 aa11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 KIAA1211Q6ZU35 1233 aa11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 ARHGEF25Q86VW2 580 aa11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 USP44Q9H0E7 712 aa11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 CHPF2Q9P2E5 772 aa11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 PNMA6EA0A0J9YXQ4 647 aa11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 ANAPC15P60006 121 aa11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 RNMTO43148 476 aaKnown RBP11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 EPB41L2O43491 1005 aaKnown RBP11.34□□□□□ -0.59
GTF3C2-202ENST00000359541 DDIT3P35638 169 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms