RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 CDK11BP21127 795 aaKnown RBP2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 BDNFP23560 247 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 C16orf54Q6UWD8 224 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 CABLES1Q8TDN4 633 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 NLRP7Q8WX94 980 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 KDM6BO15054 1643 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 EXOC8Q8IYI6 725 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 DIP2BQ9P265 1576 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 VAC14Q08AM6 782 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 SPDYE1Q8NFV5 336 aaPredicted RBP2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 MROH2AA6NES4 1674 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 ECE1P42892 770 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 VEGFBP49765 207 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 LRP10Q7Z4F1 713 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 THNSL2Q86YJ6 484 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 BCCIPQ9P287 314 aaKnown RBP eCLIP2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 NOVA2Q9UNW9 492 aaKnown RBP2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 MRC2Q9UBG0 1479 aa2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 MARF1Q9Y4F3 1742 aaKnown RBP2.89□□□□□ -1.95
SMARCAD1-202ENST00000359052 MDM2Q00987 491 aaPredicted RBP2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 ENOX2Q16206 610 aaKnown RBP2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 LYPD8Q6UX82 237 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 LRRN4Q8WUT4 740 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 VWDEQ8N2E2 1590 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 ALKQ9UM73 1620 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 ZNF592Q92610 1267 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 CCDC85AQ96PX6 553 aaPredicted RBP2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 POLA1P09884 1462 aaPredicted RBP2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 ADAMTSL3P82987 1691 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 SCAMP3O14828 347 aaKnown RBP2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 ATMINO43313 823 aaPredicted RBP2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 EIF3JO75822 258 aaKnown RBP2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 FBXO45P0C2W1 286 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 IL17REQ8NFR9 667 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 ARAP3Q8WWN8 1544 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 HMGB1P09429 215 aaKnown RBP2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 IER5LQ5T953 404 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 ANKRD13AQ8IZ07 590 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 SYMPKQ92797 1274 aaKnown RBP2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 CD2APQ9Y5K6 639 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 ZMYM4Q5VZL5 1548 aa2.88□□□□□ -1.95
SMARCAD1-202ENST00000359052 USP17L3A6NCW0 530 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 USP17L4A6NCW7 530 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 GREM1O60565 184 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 USP17L2Q6R6M4 530 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 USP17L1Q7RTZ2 530 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 IQSEC3Q9UPP2 1182 aaPredicted RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 A0A087X0B3 334 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 PAPLNO95428 1278 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 CDKN1CP49918 316 aaPredicted RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 ZNF513Q8N8E2 541 aaPredicted RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 SLC4A5Q9BY07 1137 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 DDX56Q9NY93 547 aaKnown RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 PRXQ9BXM0 1461 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 DISP1Q96F81 1524 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 PRMT3O60678 531 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 PDGFRBP09619 1106 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 ARID4AP29374 1257 aaPredicted RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 SQSTM1Q13501 440 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 RNF180Q86T96 592 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 LILRB2Q8N423 598 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 KDF1Q8NAX2 398 aaPredicted RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 OR10H5Q8NGA6 315 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 SLC4A9Q96Q91 983 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 CAMKK2Q96RR4 588 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 C1QTNF2Q9BXJ5 285 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 METTL14Q9HCE5 456 aaKnown RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 DMGDHQ9UI17 866 aaKnown RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 HTR3AP46098 478 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 SCNN1DP51172 638 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 NBPF8Q3BBV2 869 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 UHRF1BP1LA0JNW5 1464 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 RIMS1Q86UR5 1692 aaKnown RBP2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 KDM5CP41229 1560 aa2.87□□□□□ -1.95
SMARCAD1-202ENST00000359052 PIK3C2BO00750 1634 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 PRKAR2AP13861 404 aaKnown RBP2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 TYRP1P17643 537 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 BMS1Q14692 1282 aaKnown RBP2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 HCN2Q9UL51 889 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 SALL2Q9Y467 1007 aaPredicted RBP2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 YBX3P16989 372 aaKnown RBP eCLIP2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 UBE4AQ14139 1066 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 MTFR1Q15390 333 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 C4orf48Q5BLP8 95 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 IL17RAQ96F46 866 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 CEP126Q9P2H0 1117 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 NEURL4Q96JN8 1562 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 UPK3BL1B0FP48 263 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 UPK3BL2E5RIL1 263 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 FGD1P98174 961 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 TAF7LQ5H9L4 462 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 KANK3Q6NY19 840 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 USP48Q86UV5 1035 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 VTI1AQ96AJ9 217 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 RHOVQ96L33 236 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 LGR6Q9HBX8 967 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 TCF7L1Q9HCS4 588 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 OSGEPQ9NPF4 335 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 POLR3EQ9NVU0 708 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms