RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 SMARCC1Q92922 1105 aaPredicted RBP32.03■■■□□ 2.72
ALKAL1-201ENST00000358543 DLG5Q8TDM6 1919 aa32.02■■■□□ 2.72
ALKAL1-201ENST00000358543 APAF1O14727 1248 aa32■■■□□ 2.71
ALKAL1-201ENST00000358543 LMOD3Q0VAK6 560 aa32■■■□□ 2.71
ALKAL1-201ENST00000358543 TEFQ10587 303 aa32■■■□□ 2.71
ALKAL1-201ENST00000358543 MCM10Q7L590 875 aa32■■■□□ 2.71
ALKAL1-201ENST00000358543 PROM2Q8N271 834 aa31.99■■■□□ 2.71
ALKAL1-201ENST00000358543 DCTN1Q14203 1278 aa31.98■■■□□ 2.71
ALKAL1-201ENST00000358543 TXNRD1Q16881 649 aa31.98■■■□□ 2.71
ALKAL1-201ENST00000358543 ATG3Q9NT62 314 aa31.98■■■□□ 2.71
ALKAL1-201ENST00000358543 ASAP1Q9ULH1 1129 aa31.98■■■□□ 2.71
ALKAL1-201ENST00000358543 RRP7AQ9Y3A4 280 aaKnown RBP31.98■■■□□ 2.71
ALKAL1-201ENST00000358543 PALLDQ8WX93 1383 aa31.96■■■□□ 2.71
ALKAL1-201ENST00000358543 NEUROD2Q15784 382 aa31.96■■■□□ 2.71
ALKAL1-201ENST00000358543 SLC27A3Q5K4L6 730 aa31.96■■■□□ 2.71
ALKAL1-201ENST00000358543 NCBP3Q53F19 620 aaKnown RBP31.94■■■□□ 2.7
ALKAL1-201ENST00000358543 TRIM35Q9UPQ4 493 aa31.94■■■□□ 2.7
ALKAL1-201ENST00000358543 LY75O60449 1722 aa31.94■■■□□ 2.7
ALKAL1-201ENST00000358543 SIPA1L3O60292 1781 aaPredicted RBP31.92■■■□□ 2.7
ALKAL1-201ENST00000358543 RREB1Q92766 1687 aa31.92■■■□□ 2.7
ALKAL1-201ENST00000358543 TAF7Q15545 349 aaPredicted RBP31.91■■■□□ 2.7
ALKAL1-201ENST00000358543 HMGB2P26583 209 aaKnown RBP31.9■■■□□ 2.7
ALKAL1-201ENST00000358543 BTBD11A6QL63 1104 aa31.89■■■□□ 2.7
ALKAL1-201ENST00000358543 LRRC4BQ9NT99 713 aa31.89■■■□□ 2.7
ALKAL1-201ENST00000358543 CCNL1Q9UK58 526 aaPredicted RBP31.89■■■□□ 2.7
ALKAL1-201ENST00000358543 LOC102724428A0A0B4J2F2 783 aa31.88■■■□□ 2.69
ALKAL1-201ENST00000358543 SIK1P57059 783 aa31.88■■■□□ 2.69
ALKAL1-201ENST00000358543 THUMPD2Q9BTF0 503 aaKnown RBP31.88■■■□□ 2.69
ALKAL1-201ENST00000358543 CCDC27Q2M243 656 aa31.87■■■□□ 2.69
ALKAL1-201ENST00000358543 PAPPAQ13219 1627 aa31.86■■■□□ 2.69
ALKAL1-201ENST00000358543 SLC39A6Q13433 755 aa31.86■■■□□ 2.69
ALKAL1-201ENST00000358543 ZNF790Q6PG37 636 aa31.86■■■□□ 2.69
ALKAL1-201ENST00000358543 NGEFQ8N5V2 710 aa31.85■■■□□ 2.69
ALKAL1-201ENST00000358543 NUP188Q5SRE5 1749 aa31.84■■■□□ 2.69
ALKAL1-201ENST00000358543 TTC5Q8N0Z6 440 aa31.84■■■□□ 2.69
ALKAL1-201ENST00000358543 BABAM1Q9NWV8 329 aa31.84■■■□□ 2.69
ALKAL1-201ENST00000358543 RBM42Q9BTD8 480 aaKnown RBP31.83■■■□□ 2.69
ALKAL1-201ENST00000358543 PTCD1O75127 700 aaKnown RBP31.82■■■□□ 2.68
ALKAL1-201ENST00000358543 ATP6V1AP38606 617 aa31.82■■■□□ 2.68
ALKAL1-201ENST00000358543 NBPF14Q5TI25 921 aa31.82■■■□□ 2.68
ALKAL1-201ENST00000358543 ZNF831Q5JPB2 1677 aa31.81■■■□□ 2.68
ALKAL1-201ENST00000358543 SLC4A9Q96Q91 983 aa31.81■■■□□ 2.68
ALKAL1-201ENST00000358543 KCNQ4P56696 695 aa31.8■■■□□ 2.68
ALKAL1-201ENST00000358543 CALD1Q05682 793 aaKnown RBP31.8■■■□□ 2.68
ALKAL1-201ENST00000358543 VSIG10Q8N0Z9 540 aa31.8■■■□□ 2.68
ALKAL1-201ENST00000358543 KCPQ6ZWJ8 1503 aa31.79■■■□□ 2.68
ALKAL1-201ENST00000358543 UBR2Q8IWV8 1755 aa31.79■■■□□ 2.68
ALKAL1-201ENST00000358543 WWC1Q8IX03 1113 aa31.78■■■□□ 2.68
ALKAL1-201ENST00000358543 MIS18AQ9NYP9 233 aa31.78■■■□□ 2.68
ALKAL1-201ENST00000358543 KCNQ3O43525 872 aa31.77■■■□□ 2.68
ALKAL1-201ENST00000358543 ITPK1Q13572 414 aa31.77■■■□□ 2.68
ALKAL1-201ENST00000358543 FMNL2Q96PY5 1086 aa31.77■■■□□ 2.68
ALKAL1-201ENST00000358543 ZNF496Q96IT1 587 aaPredicted RBP31.76■■■□□ 2.67
ALKAL1-201ENST00000358543 CHL1O00533 1208 aa31.75■■■□□ 2.67
ALKAL1-201ENST00000358543 AKT1S1Q96B36 256 aa31.74■■■□□ 2.67
ALKAL1-201ENST00000358543 CFAP44Q96MT7 982 aa31.74■■■□□ 2.67
ALKAL1-201ENST00000358543 STK32BQ9NY57 414 aa31.74■■■□□ 2.67
ALKAL1-201ENST00000358543 TSPYL4Q9UJ04 414 aa31.74■■■□□ 2.67
ALKAL1-201ENST00000358543 TAF1LQ8IZX4 1826 aa31.74■■■□□ 2.67
ALKAL1-201ENST00000358543 HEG1Q9ULI3 1381 aa31.73■■■□□ 2.67
ALKAL1-201ENST00000358543 SENP3-EIF4A1A0A087X0R7 540 aa31.73■■■□□ 2.67
ALKAL1-201ENST00000358543 SLC15A2Q16348 729 aa31.73■■■□□ 2.67
ALKAL1-201ENST00000358543 ANO8Q9HCE9 1232 aaPredicted RBP31.73■■■□□ 2.67
ALKAL1-201ENST00000358543 CICQ96RK0 1608 aaPredicted RBP31.73■■■□□ 2.67
ALKAL1-201ENST00000358543 C5P01031 1676 aa31.73■■■□□ 2.67
ALKAL1-201ENST00000358543 KDM3BQ7LBC6 1761 aa31.72■■■□□ 2.67
ALKAL1-201ENST00000358543 ZNF853P0CG23 659 aa31.72■■■□□ 2.67
ALKAL1-201ENST00000358543 LINC00116Q8NCU8 138 aa31.72■■■□□ 2.67
ALKAL1-201ENST00000358543 WDR63Q8IWG1 891 aa31.71■■■□□ 2.67
ALKAL1-201ENST00000358543 TEX13AQ9BXU3 409 aaPredicted RBP31.71■■■□□ 2.67
ALKAL1-201ENST00000358543 IFT57Q9NWB7 429 aa31.71■■■□□ 2.67
ALKAL1-201ENST00000358543 GNAI1P63096 354 aa31.7■■■□□ 2.67
ALKAL1-201ENST00000358543 SALL2Q9Y467 1007 aaPredicted RBP31.7■■■□□ 2.67
ALKAL1-201ENST00000358543 EIF4A1P60842 406 aaKnown RBP31.69■■■□□ 2.66
ALKAL1-201ENST00000358543 ZNF827Q17R98 1081 aa31.69■■■□□ 2.66
ALKAL1-201ENST00000358543 IL16Q14005 1332 aa31.69■■■□□ 2.66
ALKAL1-201ENST00000358543 RC3H1Q5TC82 1133 aaKnown RBP31.68■■■□□ 2.66
ALKAL1-201ENST00000358543 DNAJC10Q8IXB1 793 aa31.68■■■□□ 2.66
ALKAL1-201ENST00000358543 LAS1LQ9Y4W2 734 aaKnown RBP31.68■■■□□ 2.66
ALKAL1-201ENST00000358543 SNRPA1P09661 255 aaKnown RBP31.67■■■□□ 2.66
ALKAL1-201ENST00000358543 CNTNAP4Q9C0A0 1308 aa31.67■■■□□ 2.66
ALKAL1-201ENST00000358543 C4BP0C0L5 1744 aa31.66■■■□□ 2.66
ALKAL1-201ENST00000358543 TJP1Q07157 1748 aa31.66■■■□□ 2.66
ALKAL1-201ENST00000358543 COL5A3P25940 1745 aaPredicted RBP31.66■■■□□ 2.66
ALKAL1-201ENST00000358543 CYP19A1P11511 503 aaPredicted RBP31.64■■■□□ 2.66
ALKAL1-201ENST00000358543 R3HDM1Q15032 1099 aaKnown RBP31.64■■■□□ 2.66
ALKAL1-201ENST00000358543 AK7Q96M32 723 aa31.64■■■□□ 2.66
ALKAL1-201ENST00000358543 TFCP2L1Q9NZI6 479 aa31.64■■■□□ 2.66
ALKAL1-201ENST00000358543 STARD3NLO95772 234 aa31.63■■■□□ 2.65
ALKAL1-201ENST00000358543 MBIPQ9NS73 344 aa31.63■■■□□ 2.65
ALKAL1-201ENST00000358543 ZNF521Q96K83 1311 aa31.63■■■□□ 2.65
ALKAL1-201ENST00000358543 GIGYF1O75420 1035 aaPredicted RBP31.62■■■□□ 2.65
ALKAL1-201ENST00000358543 CRKLP46109 303 aaKnown RBP31.61■■■□□ 2.65
ALKAL1-201ENST00000358543 INTS5Q6P9B9 1019 aaKnown RBP31.6■■■□□ 2.65
ALKAL1-201ENST00000358543 PSDA5PKW4 1024 aaPredicted RBP31.59■■■□□ 2.65
ALKAL1-201ENST00000358543 FLAD1Q8NFF5 587 aa31.59■■■□□ 2.65
ALKAL1-201ENST00000358543 USP16Q9Y5T5 823 aa31.59■■■□□ 2.65
ALKAL1-201ENST00000358543 MYH14Q7Z406 1995 aaKnown RBP31.59■■■□□ 2.65
ALKAL1-201ENST00000358543 PRAMEF22A3QJZ6 481 aa31.58■■■□□ 2.65
ALKAL1-201ENST00000358543 RPS6KA4O75676 772 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms