RNA–Protein interactions for RNA: ENST00000358394.7

CEACAM1-204, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-204ENST00000358394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.34□□□□□ -0.43
CEACAM1-204ENST00000358394 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
CEACAM1-204ENST00000358394 SSFA2P28290 1259 aa12.33□□□□□ -0.44
CEACAM1-204ENST00000358394 IFNL2Q8IZJ0 200 aa12.33□□□□□ -0.44
CEACAM1-204ENST00000358394 ASAP1Q9ULH1 1129 aa12.33□□□□□ -0.44
CEACAM1-204ENST00000358394 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
CEACAM1-204ENST00000358394 PHKG2P15735 406 aa12.32□□□□□ -0.44
CEACAM1-204ENST00000358394 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
CEACAM1-204ENST00000358394 TNNT2P45379 298 aaPredicted RBP12.32□□□□□ -0.44
CEACAM1-204ENST00000358394 TIMELESSQ9UNS1 1208 aa12.32□□□□□ -0.44
CEACAM1-204ENST00000358394 IGSF1Q8N6C5 1336 aa12.31□□□□□ -0.44
CEACAM1-204ENST00000358394 GNPATO15228 680 aa12.31□□□□□ -0.44
CEACAM1-204ENST00000358394 ITPK1Q13572 414 aa12.31□□□□□ -0.44
CEACAM1-204ENST00000358394 EIF4A2Q14240 407 aaKnown RBP12.31□□□□□ -0.44
CEACAM1-204ENST00000358394 WWC3Q9ULE0 1092 aa12.31□□□□□ -0.44
CEACAM1-204ENST00000358394 ATG3Q9NT62 314 aa12.3□□□□□ -0.44
CEACAM1-204ENST00000358394 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
CEACAM1-204ENST00000358394 ZNF526Q8TF50 670 aaPredicted RBP12.27□□□□□ -0.44
CEACAM1-204ENST00000358394 ADCY9O60503 1353 aa12.27□□□□□ -0.44
CEACAM1-204ENST00000358394 MMP10P09238 476 aa12.27□□□□□ -0.45
CEACAM1-204ENST00000358394 DSG3P32926 999 aa12.27□□□□□ -0.45
CEACAM1-204ENST00000358394 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
CEACAM1-204ENST00000358394 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 KIF13BQ9NQT8 1826 aa12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 ERVV-2B6SEH9 535 aa12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 HSP90AB1P08238 724 aaKnown RBP12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 PLEKHO1Q53GL0 409 aaPredicted RBP12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 TRAPPC3LQ5T215 181 aa12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 DCAF5Q96JK2 942 aa12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 PCGF6Q9BYE7 350 aa12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 RTCBQ9Y3I0 505 aaKnown RBP12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 KDRP35968 1356 aa12.26□□□□□ -0.45
CEACAM1-204ENST00000358394 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
CEACAM1-204ENST00000358394 ZNF831Q5JPB2 1677 aa12.25□□□□□ -0.45
CEACAM1-204ENST00000358394 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
CEACAM1-204ENST00000358394 PANK3Q9H999 370 aa12.25□□□□□ -0.45
CEACAM1-204ENST00000358394 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
CEACAM1-204ENST00000358394 CICQ96RK0 1608 aaPredicted RBP12.24□□□□□ -0.45
CEACAM1-204ENST00000358394 CABP4P57796 275 aa12.24□□□□□ -0.45
CEACAM1-204ENST00000358394 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
CEACAM1-204ENST00000358394 ZNF530Q6P9A1 599 aaPredicted RBP12.24□□□□□ -0.45
CEACAM1-204ENST00000358394 NLGN1Q8N2Q7 840 aa12.24□□□□□ -0.45
CEACAM1-204ENST00000358394 MYH14Q7Z406 1995 aaKnown RBP12.24□□□□□ -0.45
CEACAM1-204ENST00000358394 KIAA1551Q9HCM1 1747 aa12.24□□□□□ -0.45
CEACAM1-204ENST00000358394 HSPA5P11021 654 aaKnown RBP12.23□□□□□ -0.45
CEACAM1-204ENST00000358394 AMOTQ4VCS5 1084 aa12.23□□□□□ -0.45
CEACAM1-204ENST00000358394 RC3H1Q5TC82 1133 aaKnown RBP12.23□□□□□ -0.45
CEACAM1-204ENST00000358394 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
CEACAM1-204ENST00000358394 KDM6AO15550 1401 aaPredicted RBP12.23□□□□□ -0.45
CEACAM1-204ENST00000358394 PXDNLA1KZ92 1463 aa12.22□□□□□ -0.45
CEACAM1-204ENST00000358394 RFC4P35249 363 aa12.22□□□□□ -0.45
CEACAM1-204ENST00000358394 TGFB2P61812 414 aa12.22□□□□□ -0.45
CEACAM1-204ENST00000358394 NCBP3Q53F19 620 aaKnown RBP12.22□□□□□ -0.45
CEACAM1-204ENST00000358394 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
CEACAM1-204ENST00000358394 C4AP0C0L4 1744 aa12.22□□□□□ -0.45
CEACAM1-204ENST00000358394 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
CEACAM1-204ENST00000358394 RPS6KA4O75676 772 aa12.21□□□□□ -0.45
CEACAM1-204ENST00000358394 GYS1P13807 737 aa12.21□□□□□ -0.45
CEACAM1-204ENST00000358394 MTHFSP49914 203 aa12.21□□□□□ -0.45
CEACAM1-204ENST00000358394 C1orf141Q5JVX7 400 aa12.21□□□□□ -0.45
CEACAM1-204ENST00000358394 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
CEACAM1-204ENST00000358394 AEBP1Q8IUX7 1158 aa12.21□□□□□ -0.45
CEACAM1-204ENST00000358394 BCS1LQ9Y276 419 aa12.21□□□□□ -0.45
CEACAM1-204ENST00000358394 PTCD1O75127 700 aaKnown RBP12.21□□□□□ -0.46
CEACAM1-204ENST00000358394 HSPA6P17066 643 aa12.21□□□□□ -0.46
CEACAM1-204ENST00000358394 CCDC87Q9NVE4 849 aa12.21□□□□□ -0.46
CEACAM1-204ENST00000358394 C10orf71Q711Q0 1435 aa12.2□□□□□ -0.46
CEACAM1-204ENST00000358394 BRCA1P38398 1863 aaKnown RBP12.2□□□□□ -0.46
CEACAM1-204ENST00000358394 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
CEACAM1-204ENST00000358394 PARP3Q9Y6F1 533 aa12.2□□□□□ -0.46
CEACAM1-204ENST00000358394 SCN11AQ9UI33 1791 aa12.19□□□□□ -0.46
CEACAM1-204ENST00000358394 KIF3CO14782 793 aa12.19□□□□□ -0.46
CEACAM1-204ENST00000358394 DPEP1P16444 411 aa12.19□□□□□ -0.46
CEACAM1-204ENST00000358394 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
CEACAM1-204ENST00000358394 ARHGAP27Q6ZUM4 889 aa12.19□□□□□ -0.46
CEACAM1-204ENST00000358394 CRKLP46109 303 aaKnown RBP12.18□□□□□ -0.46
CEACAM1-204ENST00000358394 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
CEACAM1-204ENST00000358394 TJP1Q07157 1748 aa12.18□□□□□ -0.46
CEACAM1-204ENST00000358394 CAPN15O75808 1086 aa12.17□□□□□ -0.46
CEACAM1-204ENST00000358394 FCHSD2O94868 740 aa12.17□□□□□ -0.46
CEACAM1-204ENST00000358394 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
CEACAM1-204ENST00000358394 VIRMAQ69YN4 1812 aaKnown RBP12.17□□□□□ -0.46
CEACAM1-204ENST00000358394 ARFGEF1Q9Y6D6 1849 aa12.17□□□□□ -0.46
CEACAM1-204ENST00000358394 IL13P35225 146 aa12.16□□□□□ -0.46
CEACAM1-204ENST00000358394 KCNA3P22001 575 aa12.15□□□□□ -0.46
CEACAM1-204ENST00000358394 FKBP8Q14318 412 aa12.15□□□□□ -0.46
CEACAM1-204ENST00000358394 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
CEACAM1-204ENST00000358394 USP42Q9H9J4 1324 aaKnown RBP12.15□□□□□ -0.46
CEACAM1-204ENST00000358394 DDR1Q08345 913 aa12.14□□□□□ -0.47
CEACAM1-204ENST00000358394 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
CEACAM1-204ENST00000358394 INTS5Q6P9B9 1019 aaKnown RBP12.14□□□□□ -0.47
CEACAM1-204ENST00000358394 PIM2Q9P1W9 311 aa12.14□□□□□ -0.47
CEACAM1-204ENST00000358394 DNAJC10Q8IXB1 793 aa12.14□□□□□ -0.47
CEACAM1-204ENST00000358394 SLC52A2Q9HAB3 445 aa12.14□□□□□ -0.47
CEACAM1-204ENST00000358394 LGR6Q9HBX8 967 aa12.14□□□□□ -0.47
CEACAM1-204ENST00000358394 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
CEACAM1-204ENST00000358394 ZPR1O75312 459 aa12.13□□□□□ -0.47
CEACAM1-204ENST00000358394 TOMM70O94826 608 aa12.13□□□□□ -0.47
CEACAM1-204ENST00000358394 DALRD3Q5D0E6 543 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms