RNA–Protein interactions for RNA: ENST00000356876.7

TNFRSF25-204, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-204ENST00000356876 SCN11AQ9UI33 1791 aa33.18■■■□□ 2.9
TNFRSF25-204ENST00000356876 VPS72Q15906 364 aa33.17■■■□□ 2.9
TNFRSF25-204ENST00000356876 MEX3CQ5U5Q3 659 aaKnown RBP33.17■■■□□ 2.9
TNFRSF25-204ENST00000356876 CCDC9Q9Y3X0 531 aaKnown RBP33.17■■■□□ 2.9
TNFRSF25-204ENST00000356876 SOS1Q07889 1333 aaPredicted RBP33.17■■■□□ 2.9
TNFRSF25-204ENST00000356876 VIRMAQ69YN4 1812 aaKnown RBP33.16■■■□□ 2.9
TNFRSF25-204ENST00000356876 EXOC5O00471 708 aa33.16■■■□□ 2.9
TNFRSF25-204ENST00000356876 C20orf194Q5TEA3 1177 aa33.16■■■□□ 2.9
TNFRSF25-204ENST00000356876 BARGINQ6ZT62 677 aa33.16■■■□□ 2.9
TNFRSF25-204ENST00000356876 PDE3AQ14432 1141 aa33.15■■■□□ 2.9
TNFRSF25-204ENST00000356876 MRC1P22897 1456 aa33.14■■■□□ 2.9
TNFRSF25-204ENST00000356876 SHANK3Q9BYB0 1731 aa33.14■■■□□ 2.9
TNFRSF25-204ENST00000356876 EIF4A1P60842 406 aaKnown RBP33.14■■■□□ 2.9
TNFRSF25-204ENST00000356876 NFATC2IPQ8NCF5 419 aa33.14■■■□□ 2.9
TNFRSF25-204ENST00000356876 USP21Q9UK80 565 aa33.13■■■□□ 2.89
TNFRSF25-204ENST00000356876 KIF16BQ96L93 1317 aa33.13■■■□□ 2.89
TNFRSF25-204ENST00000356876 SIPA1L3O60292 1781 aaPredicted RBP33.13■■■□□ 2.89
TNFRSF25-204ENST00000356876 ERVV-2B6SEH9 535 aa33.13■■■□□ 2.89
TNFRSF25-204ENST00000356876 MRPL50Q8N5N7 158 aaKnown RBP33.13■■■□□ 2.89
TNFRSF25-204ENST00000356876 KDM3BQ7LBC6 1761 aa33.12■■■□□ 2.89
TNFRSF25-204ENST00000356876 CABP4P57796 275 aa33.12■■■□□ 2.89
TNFRSF25-204ENST00000356876 ZKSCAN2Q63HK3 967 aa33.12■■■□□ 2.89
TNFRSF25-204ENST00000356876 WNK3Q9BYP7 1800 aa33.1■■■□□ 2.89
TNFRSF25-204ENST00000356876 KCNQ3O43525 872 aa33.1■■■□□ 2.89
TNFRSF25-204ENST00000356876 IPO8O15397 1037 aaKnown RBP33.1■■■□□ 2.89
TNFRSF25-204ENST00000356876 EXOC6Q8TAG9 804 aa33.1■■■□□ 2.89
TNFRSF25-204ENST00000356876 PPP4R2Q9NY27 417 aa33.1■■■□□ 2.89
TNFRSF25-204ENST00000356876 NOB1Q9ULX3 412 aaKnown RBP33.1■■■□□ 2.89
TNFRSF25-204ENST00000356876 CRBNQ96SW2 442 aa33.09■■■□□ 2.89
TNFRSF25-204ENST00000356876 TNS2Q63HR2 1409 aa33.09■■■□□ 2.89
TNFRSF25-204ENST00000356876 HOXB7P09629 217 aa33.07■■■□□ 2.88
TNFRSF25-204ENST00000356876 MS4A1P11836 297 aa33.07■■■□□ 2.88
TNFRSF25-204ENST00000356876 TCERG1O14776 1098 aaKnown RBP33.06■■■□□ 2.88
TNFRSF25-204ENST00000356876 DDB1Q16531 1140 aa33.06■■■□□ 2.88
TNFRSF25-204ENST00000356876 ZNF790Q6PG37 636 aa33.06■■■□□ 2.88
TNFRSF25-204ENST00000356876 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.06■■■□□ 2.88
TNFRSF25-204ENST00000356876 ATF7IPQ6VMQ6 1270 aa33.06■■■□□ 2.88
TNFRSF25-204ENST00000356876 ARHGAP45Q92619 1136 aa33.05■■■□□ 2.88
TNFRSF25-204ENST00000356876 CHMP4AQ9BY43 222 aa33.04■■■□□ 2.88
TNFRSF25-204ENST00000356876 AFF2P51816 1311 aa33.04■■■□□ 2.88
TNFRSF25-204ENST00000356876 HEG1Q9ULI3 1381 aa33.04■■■□□ 2.88
TNFRSF25-204ENST00000356876 CCDC30Q5VVM6 783 aa33.03■■■□□ 2.88
TNFRSF25-204ENST00000356876 SLC39A6Q13433 755 aa33.02■■■□□ 2.88
TNFRSF25-204ENST00000356876 PANK1Q8TE04 598 aa33.02■■■□□ 2.88
TNFRSF25-204ENST00000356876 TRIM27P14373 513 aa33.02■■■□□ 2.88
TNFRSF25-204ENST00000356876 DZIP1LQ8IYY4 767 aaKnown RBP33.01■■■□□ 2.87
TNFRSF25-204ENST00000356876 FAM98CQ17RN3 349 aaKnown RBP33■■■□□ 2.87
TNFRSF25-204ENST00000356876 TNNQ9UQP3 1299 aa33■■■□□ 2.87
TNFRSF25-204ENST00000356876 GIGYF1O75420 1035 aaPredicted RBP32.99■■■□□ 2.87
TNFRSF25-204ENST00000356876 TTC5Q8N0Z6 440 aa32.99■■■□□ 2.87
TNFRSF25-204ENST00000356876 STK31Q9BXU1 1019 aa32.99■■■□□ 2.87
TNFRSF25-204ENST00000356876 SLC4A2P04920 1241 aa32.99■■■□□ 2.87
TNFRSF25-204ENST00000356876 RLBP1P12271 317 aa32.99■■■□□ 2.87
TNFRSF25-204ENST00000356876 FTSJ3Q8IY81 847 aaKnown RBP32.99■■■□□ 2.87
TNFRSF25-204ENST00000356876 CLUAP1Q96AJ1 413 aa32.99■■■□□ 2.87
TNFRSF25-204ENST00000356876 HDGFL1Q5TGJ6 251 aa32.98■■■□□ 2.87
TNFRSF25-204ENST00000356876 TMOD3Q9NYL9 352 aa32.96■■■□□ 2.87
TNFRSF25-204ENST00000356876 COG6Q9Y2V7 657 aa32.95■■■□□ 2.87
TNFRSF25-204ENST00000356876 GJD4Q96KN9 370 aaPredicted RBP32.95■■■□□ 2.86
TNFRSF25-204ENST00000356876 API5Q9BZZ5 524 aaKnown RBP32.95■■■□□ 2.86
TNFRSF25-204ENST00000356876 TRPC5Q9UL62 973 aaPredicted RBP32.95■■■□□ 2.86
TNFRSF25-204ENST00000356876 ZNF496Q96IT1 587 aaPredicted RBP32.94■■■□□ 2.86
TNFRSF25-204ENST00000356876 FMNL2Q96PY5 1086 aa32.94■■■□□ 2.86
TNFRSF25-204ENST00000356876 TOGARAM1Q9Y4F4 1720 aa32.93■■■□□ 2.86
TNFRSF25-204ENST00000356876 ATRNO75882 1429 aa32.93■■■□□ 2.86
TNFRSF25-204ENST00000356876 EIF2S2P20042 333 aaKnown RBP32.93■■■□□ 2.86
TNFRSF25-204ENST00000356876 MARCH10Q8NA82 808 aaPredicted RBP32.93■■■□□ 2.86
TNFRSF25-204ENST00000356876 NECTIN2Q92692 538 aa32.93■■■□□ 2.86
TNFRSF25-204ENST00000356876 PTPRCP08575 1304 aa32.93■■■□□ 2.86
TNFRSF25-204ENST00000356876 MVPQ14764 893 aaKnown RBP32.9■■■□□ 2.86
TNFRSF25-204ENST00000356876 SNRPA1P09661 255 aaKnown RBP32.89■■■□□ 2.86
TNFRSF25-204ENST00000356876 PIGBQ92521 554 aa32.89■■■□□ 2.86
TNFRSF25-204ENST00000356876 B4GALNT3Q6L9W6 998 aa32.88■■■□□ 2.85
TNFRSF25-204ENST00000356876 CCDC136Q96JN2 1154 aa32.88■■■□□ 2.85
TNFRSF25-204ENST00000356876 PRAMEF22A3QJZ6 481 aa32.87■■■□□ 2.85
TNFRSF25-204ENST00000356876 AAMPQ13685 434 aa32.87■■■□□ 2.85
TNFRSF25-204ENST00000356876 G2E3Q7L622 706 aa32.87■■■□□ 2.85
TNFRSF25-204ENST00000356876 TMEM57Q8N5G2 664 aa32.87■■■□□ 2.85
TNFRSF25-204ENST00000356876 ABCC4O15439 1325 aa32.87■■■□□ 2.85
TNFRSF25-204ENST00000356876 GLI3P10071 1580 aa32.86■■■□□ 2.85
TNFRSF25-204ENST00000356876 BCL9O00512 1426 aa32.86■■■□□ 2.85
TNFRSF25-204ENST00000356876 FBXO41Q8TF61 875 aa32.86■■■□□ 2.85
TNFRSF25-204ENST00000356876 QTRT2Q9H974 415 aaKnown RBP32.86■■■□□ 2.85
TNFRSF25-204ENST00000356876 ONECUT3O60422 494 aaPredicted RBP32.85■■■□□ 2.85
TNFRSF25-204ENST00000356876 DBF4Q9UBU7 674 aaPredicted RBP32.85■■■□□ 2.85
TNFRSF25-204ENST00000356876 PAPPAQ13219 1627 aa32.85■■■□□ 2.85
TNFRSF25-204ENST00000356876 A0A0G2JS52 829 aa32.84■■■□□ 2.85
TNFRSF25-204ENST00000356876 MYT1Q01538 1121 aa32.84■■■□□ 2.85
TNFRSF25-204ENST00000356876 FLIIQ13045 1269 aa32.84■■■□□ 2.85
TNFRSF25-204ENST00000356876 CHPF2Q9P2E5 772 aa32.84■■■□□ 2.85
TNFRSF25-204ENST00000356876 THSD7AQ9UPZ6 1657 aa32.84■■■□□ 2.85
TNFRSF25-204ENST00000356876 PRIM1P49642 420 aaKnown RBP32.84■■■□□ 2.85
TNFRSF25-204ENST00000356876 ITPRIPQ8IWB1 547 aa32.84■■■□□ 2.85
TNFRSF25-204ENST00000356876 DDX19BQ9UMR2 479 aa32.84■■■□□ 2.85
TNFRSF25-204ENST00000356876 RGS12O14924 1447 aa32.82■■■□□ 2.84
TNFRSF25-204ENST00000356876 CACNA1FO60840 1977 aa32.81■■■□□ 2.84
TNFRSF25-204ENST00000356876 KCPQ6ZWJ8 1503 aa32.81■■■□□ 2.84
TNFRSF25-204ENST00000356876 SYTL4Q96C24 671 aaPredicted RBP32.81■■■□□ 2.84
TNFRSF25-204ENST00000356876 ATG3Q9NT62 314 aa32.81■■■□□ 2.84
TNFRSF25-204ENST00000356876 ASAP1Q9ULH1 1129 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms