RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 DPYSL4O14531 572 aa9.69□□□□□ -0.86
C11orf54-202ENST00000354421 TMF1P82094 1093 aa9.69□□□□□ -0.86
C11orf54-202ENST00000354421 TRMT2AQ8IZ69 625 aaKnown RBP9.69□□□□□ -0.86
C11orf54-202ENST00000354421 CAMKK2Q96RR4 588 aa9.69□□□□□ -0.86
C11orf54-202ENST00000354421 SLC4A3P48751 1232 aa9.68□□□□□ -0.86
C11orf54-202ENST00000354421 RSPH4AQ5TD94 716 aa9.68□□□□□ -0.86
C11orf54-202ENST00000354421 FAM43AQ8N2R8 423 aa9.68□□□□□ -0.86
C11orf54-202ENST00000354421 GPBP1L1Q9HC44 474 aaPredicted RBP9.68□□□□□ -0.86
C11orf54-202ENST00000354421 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
C11orf54-202ENST00000354421 VIRMAQ69YN4 1812 aaKnown RBP9.68□□□□□ -0.86
C11orf54-202ENST00000354421 MROH1Q8NDA8 1641 aa9.67□□□□□ -0.86
C11orf54-202ENST00000354421 MYO5CQ9NQX4 1742 aa9.67□□□□□ -0.86
C11orf54-202ENST00000354421 PIK3C2GO75747 1445 aa9.67□□□□□ -0.86
C11orf54-202ENST00000354421 ATF3P18847 181 aa9.67□□□□□ -0.86
C11orf54-202ENST00000354421 PPP4CP60510 307 aa9.67□□□□□ -0.86
C11orf54-202ENST00000354421 SLFN5Q08AF3 891 aa9.67□□□□□ -0.86
C11orf54-202ENST00000354421 UBE2Q2Q8WVN8 375 aa9.67□□□□□ -0.86
C11orf54-202ENST00000354421 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.67□□□□□ -0.86
C11orf54-202ENST00000354421 IQGAP3Q86VI3 1631 aa9.67□□□□□ -0.86
C11orf54-202ENST00000354421 NPC1L1Q9UHC9 1359 aa9.66□□□□□ -0.86
C11orf54-202ENST00000354421 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
C11orf54-202ENST00000354421 FRAT2O75474 233 aaPredicted RBP9.66□□□□□ -0.86
C11orf54-202ENST00000354421 PPP2R1AP30153 589 aa9.66□□□□□ -0.86
C11orf54-202ENST00000354421 FHDC1Q9C0D6 1143 aaPredicted RBP9.66□□□□□ -0.86
C11orf54-202ENST00000354421 EID1Q9Y6B2 187 aa9.66□□□□□ -0.86
C11orf54-202ENST00000354421 SAMD9LQ8IVG5 1584 aa9.66□□□□□ -0.86
C11orf54-202ENST00000354421 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
C11orf54-202ENST00000354421 ARHGAP5Q13017 1502 aa9.65□□□□□ -0.86
C11orf54-202ENST00000354421 GLI3P10071 1580 aa9.65□□□□□ -0.86
C11orf54-202ENST00000354421 PREX2Q70Z35 1606 aa9.65□□□□□ -0.86
C11orf54-202ENST00000354421 ATP10DQ9P241 1426 aa9.65□□□□□ -0.86
C11orf54-202ENST00000354421 HNRNPMP52272 730 aaKnown RBP eCLIP9.65□□□□□ -0.87
C11orf54-202ENST00000354421 WDR43Q15061 677 aaKnown RBP eCLIP9.65□□□□□ -0.87
C11orf54-202ENST00000354421 GPR162Q16538 588 aa9.65□□□□□ -0.87
C11orf54-202ENST00000354421 PLXNC1O60486 1568 aa9.65□□□□□ -0.87
C11orf54-202ENST00000354421 NRKQ7Z2Y5 1582 aa9.65□□□□□ -0.87
C11orf54-202ENST00000354421 RGPD1P0DJD0 1748 aa9.64□□□□□ -0.87
C11orf54-202ENST00000354421 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
C11orf54-202ENST00000354421 NGEFQ8N5V2 710 aa9.64□□□□□ -0.87
C11orf54-202ENST00000354421 DDX12PQ92771 950 aa9.64□□□□□ -0.87
C11orf54-202ENST00000354421 USP19O94966 1318 aa9.64□□□□□ -0.87
C11orf54-202ENST00000354421 ASXL1Q8IXJ9 1541 aa9.63□□□□□ -0.87
C11orf54-202ENST00000354421 C19orf44Q9H6X5 657 aa9.63□□□□□ -0.87
C11orf54-202ENST00000354421 SLIT1O75093 1534 aa9.63□□□□□ -0.87
C11orf54-202ENST00000354421 CDC42BPBQ9Y5S2 1711 aa9.63□□□□□ -0.87
C11orf54-202ENST00000354421 MAP3K7O43318 606 aa9.62□□□□□ -0.87
C11orf54-202ENST00000354421 RGS19P49795 217 aa9.62□□□□□ -0.87
C11orf54-202ENST00000354421 RGL3Q3MIN7 710 aa9.62□□□□□ -0.87
C11orf54-202ENST00000354421 TSKSQ9UJT2 592 aa9.62□□□□□ -0.87
C11orf54-202ENST00000354421 MAPK8IP3Q9UPT6 1336 aa9.62□□□□□ -0.87
C11orf54-202ENST00000354421 DLC1Q96QB1 1528 aa9.62□□□□□ -0.87
C11orf54-202ENST00000354421 SPDYE16A6NNV3 312 aaPredicted RBP9.62□□□□□ -0.87
C11orf54-202ENST00000354421 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
C11orf54-202ENST00000354421 KNSTRNQ9Y448 316 aa9.62□□□□□ -0.87
C11orf54-202ENST00000354421 CGNL1Q0VF96 1302 aa9.61□□□□□ -0.87
C11orf54-202ENST00000354421 RGS3P49796 1198 aa9.61□□□□□ -0.87
C11orf54-202ENST00000354421 PDE3AQ14432 1141 aa9.61□□□□□ -0.87
C11orf54-202ENST00000354421 BECN1Q14457 450 aa9.61□□□□□ -0.87
C11orf54-202ENST00000354421 CDCA8Q53HL2 280 aa9.61□□□□□ -0.87
C11orf54-202ENST00000354421 SLC26A8Q96RN1 970 aa9.61□□□□□ -0.87
C11orf54-202ENST00000354421 KIAA1210Q9ULL0 1709 aa9.6□□□□□ -0.87
C11orf54-202ENST00000354421 E9PSI1 815 aa9.6□□□□□ -0.87
C11orf54-202ENST00000354421 HSPA1AP0DMV8 641 aaKnown RBP9.6□□□□□ -0.87
C11orf54-202ENST00000354421 HSPA1BP0DMV9 641 aaKnown RBP9.6□□□□□ -0.87
C11orf54-202ENST00000354421 PDIA6Q15084 440 aa9.6□□□□□ -0.87
C11orf54-202ENST00000354421 TJAP1Q5JTD0 557 aa9.6□□□□□ -0.87
C11orf54-202ENST00000354421 L1TD1Q5T7N2 865 aaKnown RBP9.6□□□□□ -0.87
C11orf54-202ENST00000354421 UNC5CLQ8IV45 518 aa9.6□□□□□ -0.87
C11orf54-202ENST00000354421 IL21Q9HBE4 155 aa9.6□□□□□ -0.87
C11orf54-202ENST00000354421 AAMPQ13685 434 aa9.59□□□□□ -0.87
C11orf54-202ENST00000354421 V9GY48 417 aaPredicted RBP9.59□□□□□ -0.87
C11orf54-202ENST00000354421 DUOX2Q9NRD8 1548 aa9.59□□□□□ -0.87
C11orf54-202ENST00000354421 SPAG9O60271 1321 aaKnown RBP9.59□□□□□ -0.87
C11orf54-202ENST00000354421 MYOM1P52179 1685 aa9.59□□□□□ -0.87
C11orf54-202ENST00000354421 IGHDP01880 384 aa9.59□□□□□ -0.87
C11orf54-202ENST00000354421 PRKD2Q9BZL6 878 aa9.59□□□□□ -0.87
C11orf54-202ENST00000354421 PRSS12P56730 875 aa9.58□□□□□ -0.88
C11orf54-202ENST00000354421 SYCP2Q9BX26 1530 aa9.58□□□□□ -0.88
C11orf54-202ENST00000354421 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
C11orf54-202ENST00000354421 TSR1Q2NL82 804 aaKnown RBP9.57□□□□□ -0.88
C11orf54-202ENST00000354421 SAMD7Q7Z3H4 446 aa9.57□□□□□ -0.88
C11orf54-202ENST00000354421 NECTIN2Q92692 538 aa9.57□□□□□ -0.88
C11orf54-202ENST00000354421 ANTXR1Q9H6X2 564 aa9.57□□□□□ -0.88
C11orf54-202ENST00000354421 BCAR3O75815 825 aa9.56□□□□□ -0.88
C11orf54-202ENST00000354421 POGKQ9P215 609 aa9.56□□□□□ -0.88
C11orf54-202ENST00000354421 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
C11orf54-202ENST00000354421 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.56□□□□□ -0.88
C11orf54-202ENST00000354421 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.56□□□□□ -0.88
C11orf54-202ENST00000354421 APAF1O14727 1248 aa9.56□□□□□ -0.88
C11orf54-202ENST00000354421 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
C11orf54-202ENST00000354421 DDX17Q92841 729 aaKnown RBP9.56□□□□□ -0.88
C11orf54-202ENST00000354421 CLUAP1Q96AJ1 413 aa9.56□□□□□ -0.88
C11orf54-202ENST00000354421 MTRQ99707 1265 aa9.56□□□□□ -0.88
C11orf54-202ENST00000354421 STK17AQ9UEE5 414 aa9.56□□□□□ -0.88
C11orf54-202ENST00000354421 TET3O43151 1660 aa9.55□□□□□ -0.88
C11orf54-202ENST00000354421 TNS1Q9HBL0 1735 aaKnown RBP9.55□□□□□ -0.88
C11orf54-202ENST00000354421 PITPNM2Q9BZ72 1349 aa9.54□□□□□ -0.88
C11orf54-202ENST00000354421 WDR90Q96KV7 1748 aa9.54□□□□□ -0.88
C11orf54-202ENST00000354421 EIF5BO60841 1220 aaKnown RBP9.54□□□□□ -0.88
C11orf54-202ENST00000354421 PMFBP1Q8TBY8 1022 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms