RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TRIM27P14373 513 aa26.27■■□□□ 1.8
TRIM4-202ENST00000354241 DZIP1LQ8IYY4 767 aaKnown RBP26.27■■□□□ 1.8
TRIM4-202ENST00000354241 ZCRB1Q8TBF4 217 aaKnown RBP26.27■■□□□ 1.8
TRIM4-202ENST00000354241 JCADQ9P266 1359 aa26.26■■□□□ 1.79
TRIM4-202ENST00000354241 PCDH11XQ9BZA7 1347 aa26.25■■□□□ 1.79
TRIM4-202ENST00000354241 PCDH11YQ9BZA8 1340 aa26.25■■□□□ 1.79
TRIM4-202ENST00000354241 NRAPQ86VF7 1730 aa26.25■■□□□ 1.79
TRIM4-202ENST00000354241 HSP90AB1P08238 724 aaKnown RBP26.24■■□□□ 1.79
TRIM4-202ENST00000354241 SHANK3Q9BYB0 1731 aa26.24■■□□□ 1.79
TRIM4-202ENST00000354241 DCAF5Q96JK2 942 aa26.23■■□□□ 1.79
TRIM4-202ENST00000354241 KCNQ3O43525 872 aa26.22■■□□□ 1.79
TRIM4-202ENST00000354241 SLC52A2Q9HAB3 445 aa26.22■■□□□ 1.79
TRIM4-202ENST00000354241 EIF4A1P60842 406 aaKnown RBP26.21■■□□□ 1.79
TRIM4-202ENST00000354241 NWD2Q9ULI1 1742 aa26.21■■□□□ 1.79
TRIM4-202ENST00000354241 MVPQ14764 893 aaKnown RBP26.2■■□□□ 1.79
TRIM4-202ENST00000354241 ARHGAP45Q92619 1136 aa26.2■■□□□ 1.79
TRIM4-202ENST00000354241 SOS1Q07889 1333 aaPredicted RBP26.2■■□□□ 1.78
TRIM4-202ENST00000354241 WNK3Q9BYP7 1800 aa26.19■■□□□ 1.78
TRIM4-202ENST00000354241 DDX54Q8TDD1 881 aaKnown RBP26.19■■□□□ 1.78
TRIM4-202ENST00000354241 MRC1P22897 1456 aa26.18■■□□□ 1.78
TRIM4-202ENST00000354241 NFATC2IPQ8NCF5 419 aa26.18■■□□□ 1.78
TRIM4-202ENST00000354241 SLC4A2P04920 1241 aa26.17■■□□□ 1.78
TRIM4-202ENST00000354241 CCDC30Q5VVM6 783 aa26.17■■□□□ 1.78
TRIM4-202ENST00000354241 ITPRIPQ8IWB1 547 aa26.17■■□□□ 1.78
TRIM4-202ENST00000354241 TMEM57Q8N5G2 664 aa26.17■■□□□ 1.78
TRIM4-202ENST00000354241 NECTIN2Q92692 538 aa26.17■■□□□ 1.78
TRIM4-202ENST00000354241 DISP2A7MBM2 1401 aa26.16■■□□□ 1.78
TRIM4-202ENST00000354241 STK31Q9BXU1 1019 aa26.16■■□□□ 1.78
TRIM4-202ENST00000354241 API5Q9BZZ5 524 aaKnown RBP26.16■■□□□ 1.78
TRIM4-202ENST00000354241 SLIT2O94813 1529 aa26.15■■□□□ 1.78
TRIM4-202ENST00000354241 CABP4P57796 275 aa26.15■■□□□ 1.78
TRIM4-202ENST00000354241 CACNA1FO60840 1977 aa26.14■■□□□ 1.78
TRIM4-202ENST00000354241 HDGFL1Q5TGJ6 251 aa26.14■■□□□ 1.77
TRIM4-202ENST00000354241 SLC39A6Q13433 755 aa26.13■■□□□ 1.77
TRIM4-202ENST00000354241 DDX19BQ9UMR2 479 aa26.13■■□□□ 1.77
TRIM4-202ENST00000354241 HOXB7P09629 217 aa26.12■■□□□ 1.77
TRIM4-202ENST00000354241 HSPA1LP34931 641 aa26.12■■□□□ 1.77
TRIM4-202ENST00000354241 NKX1-1Q15270 411 aaPredicted RBP26.12■■□□□ 1.77
TRIM4-202ENST00000354241 C8orf37Q96NL8 207 aa26.12■■□□□ 1.77
TRIM4-202ENST00000354241 SPATA31A1Q5TZJ5 1347 aa26.12■■□□□ 1.77
TRIM4-202ENST00000354241 SPATA31A6Q5VVP1 1343 aa26.12■■□□□ 1.77
TRIM4-202ENST00000354241 AAMPQ13685 434 aa26.12■■□□□ 1.77
TRIM4-202ENST00000354241 ZNF790Q6PG37 636 aa26.12■■□□□ 1.77
TRIM4-202ENST00000354241 ABCC4O15439 1325 aa26.11■■□□□ 1.77
TRIM4-202ENST00000354241 PTPRCP08575 1304 aa26.11■■□□□ 1.77
TRIM4-202ENST00000354241 EIF2S2P20042 333 aaKnown RBP26.11■■□□□ 1.77
TRIM4-202ENST00000354241 CCDC9Q9Y3X0 531 aaKnown RBP26.11■■□□□ 1.77
TRIM4-202ENST00000354241 NGLY1Q96IV0 654 aa26.1■■□□□ 1.77
TRIM4-202ENST00000354241 G2E3Q7L622 706 aa26.1■■□□□ 1.77
TRIM4-202ENST00000354241 THRAP3Q9Y2W1 955 aaKnown RBP26.09■■□□□ 1.77
TRIM4-202ENST00000354241 LRP6O75581 1613 aa26.09■■□□□ 1.77
TRIM4-202ENST00000354241 HEG1Q9ULI3 1381 aa26.08■■□□□ 1.77
TRIM4-202ENST00000354241 ERVV-2B6SEH9 535 aa26.08■■□□□ 1.77
TRIM4-202ENST00000354241 SPATA31A5Q5VU36 1347 aa26.08■■□□□ 1.77
TRIM4-202ENST00000354241 SPATA31A7Q8IWB4 1347 aa26.08■■□□□ 1.77
TRIM4-202ENST00000354241 TOGARAM1Q9Y4F4 1720 aa26.08■■□□□ 1.77
TRIM4-202ENST00000354241 TTC5Q8N0Z6 440 aa26.08■■□□□ 1.76
TRIM4-202ENST00000354241 CHMP4AQ9BY43 222 aa26.08■■□□□ 1.76
TRIM4-202ENST00000354241 RGS12O14924 1447 aa26.08■■□□□ 1.76
TRIM4-202ENST00000354241 EXOC5O00471 708 aa26.07■■□□□ 1.76
TRIM4-202ENST00000354241 GIGYF1O75420 1035 aaPredicted RBP26.07■■□□□ 1.76
TRIM4-202ENST00000354241 UNC5CLQ8IV45 518 aa26.07■■□□□ 1.76
TRIM4-202ENST00000354241 CDCA7Q9BWT1 371 aaPredicted RBP26.06■■□□□ 1.76
TRIM4-202ENST00000354241 C5P01031 1676 aa26.05■■□□□ 1.76
TRIM4-202ENST00000354241 TNS2Q63HR2 1409 aa26.05■■□□□ 1.76
TRIM4-202ENST00000354241 PRAMEF22A3QJZ6 481 aa26.04■■□□□ 1.76
TRIM4-202ENST00000354241 FLIIQ13045 1269 aa26.04■■□□□ 1.76
TRIM4-202ENST00000354241 CENPQQ7L2Z9 268 aaPredicted RBP26.04■■□□□ 1.76
TRIM4-202ENST00000354241 CHPF2Q9P2E5 772 aa26.04■■□□□ 1.76
TRIM4-202ENST00000354241 KDM2BQ8NHM5 1336 aa26.04■■□□□ 1.76
TRIM4-202ENST00000354241 ZNF496Q96IT1 587 aaPredicted RBP26.02■■□□□ 1.76
TRIM4-202ENST00000354241 PCDHB15Q9Y5E8 787 aa26.02■■□□□ 1.76
TRIM4-202ENST00000354241 BCL9LQ86UU0 1499 aa26.02■■□□□ 1.76
TRIM4-202ENST00000354241 FKBP5Q13451 457 aaPredicted RBP26.02■■□□□ 1.76
TRIM4-202ENST00000354241 MEX3CQ5U5Q3 659 aaKnown RBP26.02■■□□□ 1.76
TRIM4-202ENST00000354241 PAPPAQ13219 1627 aa26.01■■□□□ 1.75
TRIM4-202ENST00000354241 FMNL2Q96PY5 1086 aa26.01■■□□□ 1.75
TRIM4-202ENST00000354241 FNBP4Q8N3X1 1017 aaPredicted RBP26■■□□□ 1.75
TRIM4-202ENST00000354241 CHMP4BQ9H444 224 aaKnown RBP26■■□□□ 1.75
TRIM4-202ENST00000354241 ZBTB40Q9NUA8 1239 aa26■■□□□ 1.75
TRIM4-202ENST00000354241 ITGB4P16144 1822 aa26■■□□□ 1.75
TRIM4-202ENST00000354241 DDB1Q16531 1140 aa26■■□□□ 1.75
TRIM4-202ENST00000354241 INTS3Q68E01 1043 aaKnown RBP26■■□□□ 1.75
TRIM4-202ENST00000354241 PHAXQ9H814 394 aaKnown RBP26■■□□□ 1.75
TRIM4-202ENST00000354241 TMOD3Q9NYL9 352 aa26■■□□□ 1.75
TRIM4-202ENST00000354241 F6X3S4 739 aa25.99■■□□□ 1.75
TRIM4-202ENST00000354241 IGHDP01880 384 aa25.99■■□□□ 1.75
TRIM4-202ENST00000354241 VPS72Q15906 364 aa25.99■■□□□ 1.75
TRIM4-202ENST00000354241 BARGINQ6ZT62 677 aa25.99■■□□□ 1.75
TRIM4-202ENST00000354241 UBR2Q8IWV8 1755 aa25.99■■□□□ 1.75
TRIM4-202ENST00000354241 ZBTB7BO15156 539 aaPredicted RBP25.98■■□□□ 1.75
TRIM4-202ENST00000354241 DBF4Q9UBU7 674 aaPredicted RBP25.98■■□□□ 1.75
TRIM4-202ENST00000354241 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.98■■□□□ 1.75
TRIM4-202ENST00000354241 SLC4A10Q6U841 1118 aa25.98■■□□□ 1.75
TRIM4-202ENST00000354241 USP21Q9UK80 565 aa25.98■■□□□ 1.75
TRIM4-202ENST00000354241 ANXA1P04083 346 aa25.97■■□□□ 1.75
TRIM4-202ENST00000354241 SNRPA1P09661 255 aaKnown RBP25.97■■□□□ 1.75
TRIM4-202ENST00000354241 KAT6BQ8WYB5 2073 aa25.97■■□□□ 1.75
TRIM4-202ENST00000354241 GLI3P10071 1580 aa25.96■■□□□ 1.75
TRIM4-202ENST00000354241 LAMB4A4D0S4 1761 aa25.95■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms