RNA–Protein interactions for RNA: ENST00000346785.9

SLC41A3-202, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2 BASIC

Gene SLC41A3, Length 1,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-202ENST00000346785 PCDH11XQ9BZA7 1347 aa27.54■■■□□ 2
SLC41A3-202ENST00000346785 PCDH11YQ9BZA8 1340 aa27.54■■■□□ 2
SLC41A3-202ENST00000346785 DCAF5Q96JK2 942 aa27.53■■■□□ 2
SLC41A3-202ENST00000346785 KDM2BQ8NHM5 1336 aa27.53■■■□□ 2
SLC41A3-202ENST00000346785 PLCH1Q4KWH8 1693 aa27.53■■■□□ 2
SLC41A3-202ENST00000346785 HOXB7P09629 217 aa27.52■■■□□ 2
SLC41A3-202ENST00000346785 ZCRB1Q8TBF4 217 aaKnown RBP27.52■■■□□ 2
SLC41A3-202ENST00000346785 JCADQ9P266 1359 aa27.51■■□□□ 1.99
SLC41A3-202ENST00000346785 ITPRIPQ8IWB1 547 aa27.51■■□□□ 1.99
SLC41A3-202ENST00000346785 BTBD11A6QL63 1104 aa27.5■■□□□ 1.99
SLC41A3-202ENST00000346785 MRC1P22897 1456 aa27.5■■□□□ 1.99
SLC41A3-202ENST00000346785 TNNQ9UQP3 1299 aa27.5■■□□□ 1.99
SLC41A3-202ENST00000346785 NWD2Q9ULI1 1742 aa27.49■■□□□ 1.99
SLC41A3-202ENST00000346785 PTPRCP08575 1304 aa27.49■■□□□ 1.99
SLC41A3-202ENST00000346785 TSHZ2Q9NRE2 1034 aa27.49■■□□□ 1.99
SLC41A3-202ENST00000346785 KDM6AO15550 1401 aaPredicted RBP27.48■■□□□ 1.99
SLC41A3-202ENST00000346785 CACNA1FO60840 1977 aa27.48■■□□□ 1.99
SLC41A3-202ENST00000346785 CYP27B1O15528 508 aa27.47■■□□□ 1.99
SLC41A3-202ENST00000346785 KRT24Q2M2I5 525 aa27.47■■□□□ 1.99
SLC41A3-202ENST00000346785 CCDC30Q5VVM6 783 aa27.47■■□□□ 1.99
SLC41A3-202ENST00000346785 TMEM57Q8N5G2 664 aa27.47■■□□□ 1.99
SLC41A3-202ENST00000346785 SLC52A2Q9HAB3 445 aa27.47■■□□□ 1.99
SLC41A3-202ENST00000346785 NRAPQ86VF7 1730 aa27.46■■□□□ 1.99
SLC41A3-202ENST00000346785 EIF4A1P60842 406 aaKnown RBP27.46■■□□□ 1.99
SLC41A3-202ENST00000346785 STK31Q9BXU1 1019 aa27.46■■□□□ 1.99
SLC41A3-202ENST00000346785 ABCC4O15439 1325 aa27.45■■□□□ 1.99
SLC41A3-202ENST00000346785 TCERG1O14776 1098 aaKnown RBP27.44■■□□□ 1.98
SLC41A3-202ENST00000346785 ADAMTS2O95450 1211 aa27.43■■□□□ 1.98
SLC41A3-202ENST00000346785 NKX1-1Q15270 411 aaPredicted RBP27.43■■□□□ 1.98
SLC41A3-202ENST00000346785 CDCA7Q9BWT1 371 aaPredicted RBP27.43■■□□□ 1.98
SLC41A3-202ENST00000346785 RWDD1Q9H446 243 aaPredicted RBP27.43■■□□□ 1.98
SLC41A3-202ENST00000346785 SHANK3Q9BYB0 1731 aa27.42■■□□□ 1.98
SLC41A3-202ENST00000346785 DISP2A7MBM2 1401 aa27.42■■□□□ 1.98
SLC41A3-202ENST00000346785 SPATA31A6Q5VVP1 1343 aa27.42■■□□□ 1.98
SLC41A3-202ENST00000346785 WNK3Q9BYP7 1800 aa27.41■■□□□ 1.98
SLC41A3-202ENST00000346785 THRAP3Q9Y2W1 955 aaKnown RBP27.41■■□□□ 1.98
SLC41A3-202ENST00000346785 SLIT2O94813 1529 aa27.41■■□□□ 1.98
SLC41A3-202ENST00000346785 NUTM2BA6NNL0 878 aaPredicted RBP27.4■■□□□ 1.98
SLC41A3-202ENST00000346785 NUTM2EB1AL46 878 aaPredicted RBP27.4■■□□□ 1.98
SLC41A3-202ENST00000346785 NUTM2AQ8IVF1 878 aaPredicted RBP27.4■■□□□ 1.98
SLC41A3-202ENST00000346785 ERVV-2B6SEH9 535 aa27.39■■□□□ 1.98
SLC41A3-202ENST00000346785 SLC4A2P04920 1241 aa27.39■■□□□ 1.98
SLC41A3-202ENST00000346785 HEG1Q9ULI3 1381 aa27.39■■□□□ 1.97
SLC41A3-202ENST00000346785 HDGFL1Q5TGJ6 251 aa27.38■■□□□ 1.97
SLC41A3-202ENST00000346785 ZBTB40Q9NUA8 1239 aa27.38■■□□□ 1.97
SLC41A3-202ENST00000346785 CABP4P57796 275 aa27.37■■□□□ 1.97
SLC41A3-202ENST00000346785 USP35Q9P2H5 1018 aa27.37■■□□□ 1.97
SLC41A3-202ENST00000346785 ZNF790Q6PG37 636 aa27.36■■□□□ 1.97
SLC41A3-202ENST00000346785 NFATC2IPQ8NCF5 419 aa27.36■■□□□ 1.97
SLC41A3-202ENST00000346785 PCDHB15Q9Y5E8 787 aa27.36■■□□□ 1.97
SLC41A3-202ENST00000346785 INTS3Q68E01 1043 aaKnown RBP27.34■■□□□ 1.97
SLC41A3-202ENST00000346785 SPATA31A1Q5TZJ5 1347 aa27.34■■□□□ 1.97
SLC41A3-202ENST00000346785 IGHDP01880 384 aa27.33■■□□□ 1.97
SLC41A3-202ENST00000346785 HDAC1Q13547 482 aaPredicted RBP27.33■■□□□ 1.97
SLC41A3-202ENST00000346785 TTC5Q8N0Z6 440 aa27.33■■□□□ 1.97
SLC41A3-202ENST00000346785 GIGYF1O75420 1035 aaPredicted RBP27.33■■□□□ 1.96
SLC41A3-202ENST00000346785 KCNQ3O43525 872 aa27.32■■□□□ 1.96
SLC41A3-202ENST00000346785 ZBTB7BO15156 539 aaPredicted RBP27.31■■□□□ 1.96
SLC41A3-202ENST00000346785 DDX54Q8TDD1 881 aaKnown RBP27.31■■□□□ 1.96
SLC41A3-202ENST00000346785 LRP6O75581 1613 aa27.31■■□□□ 1.96
SLC41A3-202ENST00000346785 RGS12O14924 1447 aa27.31■■□□□ 1.96
SLC41A3-202ENST00000346785 TNS2Q63HR2 1409 aa27.31■■□□□ 1.96
SLC41A3-202ENST00000346785 SPATA31A5Q5VU36 1347 aa27.3■■□□□ 1.96
SLC41A3-202ENST00000346785 SPATA31A7Q8IWB4 1347 aa27.3■■□□□ 1.96
SLC41A3-202ENST00000346785 EXOC5O00471 708 aa27.3■■□□□ 1.96
SLC41A3-202ENST00000346785 CCT4P50991 539 aaKnown RBP27.29■■□□□ 1.96
SLC41A3-202ENST00000346785 FLIIQ13045 1269 aa27.29■■□□□ 1.96
SLC41A3-202ENST00000346785 UNC5CLQ8IV45 518 aa27.29■■□□□ 1.96
SLC41A3-202ENST00000346785 BARGINQ6ZT62 677 aa27.28■■□□□ 1.96
SLC41A3-202ENST00000346785 FMNL2Q96PY5 1086 aa27.28■■□□□ 1.96
SLC41A3-202ENST00000346785 DBF4Q9UBU7 674 aaPredicted RBP27.28■■□□□ 1.96
SLC41A3-202ENST00000346785 PXDNLA1KZ92 1463 aa27.27■■□□□ 1.96
SLC41A3-202ENST00000346785 PAPPAQ13219 1627 aa27.27■■□□□ 1.96
SLC41A3-202ENST00000346785 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.26■■□□□ 1.95
SLC41A3-202ENST00000346785 EIF2S2P20042 333 aaKnown RBP27.26■■□□□ 1.95
SLC41A3-202ENST00000346785 NGLY1Q96IV0 654 aa27.26■■□□□ 1.95
SLC41A3-202ENST00000346785 FNBP4Q8N3X1 1017 aaPredicted RBP27.25■■□□□ 1.95
SLC41A3-202ENST00000346785 FKBP5Q13451 457 aaPredicted RBP27.24■■□□□ 1.95
SLC41A3-202ENST00000346785 UBR2Q8IWV8 1755 aa27.24■■□□□ 1.95
SLC41A3-202ENST00000346785 SNRPA1P09661 255 aaKnown RBP27.24■■□□□ 1.95
SLC41A3-202ENST00000346785 SLC39A6Q13433 755 aa27.24■■□□□ 1.95
SLC41A3-202ENST00000346785 G2E3Q7L622 706 aa27.24■■□□□ 1.95
SLC41A3-202ENST00000346785 NECTIN2Q92692 538 aa27.24■■□□□ 1.95
SLC41A3-202ENST00000346785 N4BP2Q86UW6 1770 aaPredicted RBP27.24■■□□□ 1.95
SLC41A3-202ENST00000346785 TOGARAM1Q9Y4F4 1720 aa27.23■■□□□ 1.95
SLC41A3-202ENST00000346785 VPS72Q15906 364 aa27.23■■□□□ 1.95
SLC41A3-202ENST00000346785 C8orf37Q96NL8 207 aa27.23■■□□□ 1.95
SLC41A3-202ENST00000346785 TMOD3Q9NYL9 352 aa27.22■■□□□ 1.95
SLC41A3-202ENST00000346785 CHPF2Q9P2E5 772 aa27.22■■□□□ 1.95
SLC41A3-202ENST00000346785 RBM19Q9Y4C8 960 aaKnown RBP27.22■■□□□ 1.95
SLC41A3-202ENST00000346785 BCL9LQ86UU0 1499 aa27.22■■□□□ 1.95
SLC41A3-202ENST00000346785 LAMB4A4D0S4 1761 aa27.22■■□□□ 1.95
SLC41A3-202ENST00000346785 HSPA1LP34931 641 aa27.21■■□□□ 1.95
SLC41A3-202ENST00000346785 DDB1Q16531 1140 aa27.21■■□□□ 1.95
SLC41A3-202ENST00000346785 ZNF496Q96IT1 587 aaPredicted RBP27.21■■□□□ 1.95
SLC41A3-202ENST00000346785 HYPKQ9NX55 129 aa27.21■■□□□ 1.95
SLC41A3-202ENST00000346785 C5P01031 1676 aa27.21■■□□□ 1.95
SLC41A3-202ENST00000346785 CCDC9Q9Y3X0 531 aaKnown RBP27.21■■□□□ 1.95
SLC41A3-202ENST00000346785 DDX21Q9NR30 783 aaKnown RBP eCLIP27.19■■□□□ 1.94
SLC41A3-202ENST00000346785 SLC4A10Q6U841 1118 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms