RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 CRACR2AQ9BSW2 395 aa19.29■□□□□ 0.68
CDC42BPG-201ENST00000342711 CASQ1P31415 396 aa19.29■□□□□ 0.68
CDC42BPG-201ENST00000342711 KIF2AO00139 706 aaPredicted RBP19.29■□□□□ 0.68
CDC42BPG-201ENST00000342711 ZSCAN12O43309 604 aa19.29■□□□□ 0.68
CDC42BPG-201ENST00000342711 MAPK8IP2Q13387 824 aaPredicted RBP19.29■□□□□ 0.68
CDC42BPG-201ENST00000342711 ANO10Q9NW15 660 aa19.29■□□□□ 0.68
CDC42BPG-201ENST00000342711 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 EZRP15311 586 aaKnown RBP19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 ZNF76P36508 570 aa19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 XPCQ01831 940 aaPredicted RBP19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 PEG3Q9GZU2 1588 aa19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 KIF1BPQ96EK5 621 aa19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 USP5P45974 858 aa19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 GBP3Q9H0R5 595 aa19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 THUMPD2Q9BTF0 503 aaKnown RBP19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 SSFA2P28290 1259 aa19.28■□□□□ 0.68
CDC42BPG-201ENST00000342711 SSR1P43307 286 aaKnown RBP19.27■□□□□ 0.68
CDC42BPG-201ENST00000342711 NSD3Q9BZ95 1437 aa19.27■□□□□ 0.68
CDC42BPG-201ENST00000342711 CLIP2Q9UDT6 1046 aa19.27■□□□□ 0.68
CDC42BPG-201ENST00000342711 HECW1Q76N89 1606 aa19.27■□□□□ 0.68
CDC42BPG-201ENST00000342711 URI1O94763 535 aaPredicted RBP19.27■□□□□ 0.68
CDC42BPG-201ENST00000342711 KIF18AQ8NI77 898 aa19.27■□□□□ 0.68
CDC42BPG-201ENST00000342711 WDR97A6NE52 1622 aa19.27■□□□□ 0.68
CDC42BPG-201ENST00000342711 SPA17Q15506 151 aa19.27■□□□□ 0.67
CDC42BPG-201ENST00000342711 KLHL10Q6JEL2 608 aa19.27■□□□□ 0.67
CDC42BPG-201ENST00000342711 MATR3P43243 847 aaKnown RBP eCLIP19.26■□□□□ 0.67
CDC42BPG-201ENST00000342711 GNAT3A8MTJ3 354 aa19.26■□□□□ 0.67
CDC42BPG-201ENST00000342711 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
CDC42BPG-201ENST00000342711 U3KPZ7 1027 aaPredicted RBP19.26■□□□□ 0.67
CDC42BPG-201ENST00000342711 KIF5CO60282 957 aa19.26■□□□□ 0.67
CDC42BPG-201ENST00000342711 RAB11FIP3O75154 756 aa19.26■□□□□ 0.67
CDC42BPG-201ENST00000342711 GLRX3O76003 335 aaKnown RBP19.26■□□□□ 0.67
CDC42BPG-201ENST00000342711 ZSCAN29Q8IWY8 852 aaPredicted RBP19.26■□□□□ 0.67
CDC42BPG-201ENST00000342711 SCAND2PQ9GZW5 306 aaPredicted RBP19.26■□□□□ 0.67
CDC42BPG-201ENST00000342711 MCM10Q7L590 875 aa19.25■□□□□ 0.67
CDC42BPG-201ENST00000342711 BOLA2Q9H3K6 86 aa19.25■□□□□ 0.67
CDC42BPG-201ENST00000342711 TOP1P11387 765 aaKnown RBP19.25■□□□□ 0.67
CDC42BPG-201ENST00000342711 SHTN1A0MZ66 631 aa19.24■□□□□ 0.67
CDC42BPG-201ENST00000342711 GUCY1B3Q02153 619 aa19.24■□□□□ 0.67
CDC42BPG-201ENST00000342711 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
CDC42BPG-201ENST00000342711 RARSP54136 660 aaKnown RBP19.24■□□□□ 0.67
CDC42BPG-201ENST00000342711 KIF4BQ2VIQ3 1234 aa19.24■□□□□ 0.67
CDC42BPG-201ENST00000342711 PLEKHH2Q8IVE3 1493 aa19.24■□□□□ 0.67
CDC42BPG-201ENST00000342711 USP25Q9UHP3 1055 aa19.24■□□□□ 0.67
CDC42BPG-201ENST00000342711 SSH1Q8WYL5 1049 aa19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 CKAP2LQ8IYA6 745 aa19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 TMX1Q9H3N1 280 aa19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 INCENPQ9NQS7 918 aa19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 ABCF2Q9UG63 623 aa19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 IGHMBP2P38935 993 aaKnown RBP19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 TBC1D2Q9BYX2 928 aa19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 SH2B1Q9NRF2 756 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 METTL24Q5JXM2 366 aa19.23■□□□□ 0.67
CDC42BPG-201ENST00000342711 CCDC113Q9H0I3 377 aa19.22■□□□□ 0.67
CDC42BPG-201ENST00000342711 TRMT1Q9NXH9 659 aaKnown RBP19.22■□□□□ 0.67
CDC42BPG-201ENST00000342711 FKBP15Q5T1M5 1219 aa19.22■□□□□ 0.67
CDC42BPG-201ENST00000342711 TNNT1P13805 278 aa19.22■□□□□ 0.67
CDC42BPG-201ENST00000342711 DYDC1Q8WWB3 177 aa19.22■□□□□ 0.67
CDC42BPG-201ENST00000342711 C8orf76Q96K31 380 aa19.22■□□□□ 0.67
CDC42BPG-201ENST00000342711 MAP2K1Q02750 393 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPG-201ENST00000342711 MAP9Q49MG5 647 aa19.21■□□□□ 0.67
CDC42BPG-201ENST00000342711 BICDL1Q6ZP65 573 aa19.21■□□□□ 0.67
CDC42BPG-201ENST00000342711 CGNQ9P2M7 1197 aaKnown RBP19.21■□□□□ 0.67
CDC42BPG-201ENST00000342711 PLEKHH1Q9ULM0 1364 aa19.21■□□□□ 0.67
CDC42BPG-201ENST00000342711 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 MINDY4BA8MYZ0 360 aa19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 POLR3GO15318 223 aaPredicted RBP19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 ALDH1L2Q3SY69 923 aa19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 PPP1R1BQ9UD71 204 aaPredicted RBP19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 MPHOSPH10O00566 681 aaKnown RBP19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 LARP6Q9BRS8 491 aaKnown RBP19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 TROQ12816 1431 aaPredicted RBP19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 CACNA2D4Q7Z3S7 1137 aa19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 C16orf45Q96MC5 204 aaPredicted RBP19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 PPP1R12BO60237 982 aaPredicted RBP19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 CPLX3Q8WVH0 158 aa19.2■□□□□ 0.66
CDC42BPG-201ENST00000342711 DESP17661 470 aa19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 AKAP2Q9Y2D5 859 aa19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 CUL7Q14999 1698 aa19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 NKTRP30414 1462 aaKnown RBP19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 CCDC178Q5BJE1 867 aa19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 SEC63Q9UGP8 760 aaKnown RBP19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 IFIT1P09914 478 aaKnown RBP19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 DNA2P51530 1060 aa19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 TSG101Q99816 390 aa19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 LIMCH1Q9UPQ0 1083 aa19.19■□□□□ 0.66
CDC42BPG-201ENST00000342711 TIAM1Q13009 1591 aa19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 IBSPP21815 317 aaPredicted RBP19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 SLC26A8Q96RN1 970 aa19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 NUP88Q99567 741 aaPredicted RBP19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 NEBLO76041 1014 aa19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 LUZP1Q86V48 1076 aa19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 MYD88Q99836 296 aa19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 GDPD2Q9HCC8 539 aa19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 GIMAP7Q8NHV1 300 aa19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 CCDC8Q9H0W5 538 aaPredicted RBP19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 SLC52A1Q9NWF4 448 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms