RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 CDK19Q9BWU1 502 aa20.51■□□□□ 0.87
SYDE2-202ENST00000341460 CAPN2P17655 700 aa20.51■□□□□ 0.87
SYDE2-202ENST00000341460 CCDC83Q8IWF9 413 aa20.51■□□□□ 0.87
SYDE2-202ENST00000341460 ARFGAP3Q9NP61 516 aa20.51■□□□□ 0.87
SYDE2-202ENST00000341460 TTC39AQ5SRH9 613 aa20.5■□□□□ 0.87
SYDE2-202ENST00000341460 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
SYDE2-202ENST00000341460 CNNM1Q9NRU3 951 aa20.5■□□□□ 0.87
SYDE2-202ENST00000341460 GNL3LQ9NVN8 582 aaKnown RBP20.5■□□□□ 0.87
SYDE2-202ENST00000341460 SEPT6Q14141 434 aa20.5■□□□□ 0.87
SYDE2-202ENST00000341460 ANO10Q9NW15 660 aa20.5■□□□□ 0.87
SYDE2-202ENST00000341460 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
SYDE2-202ENST00000341460 ZKSCAN5Q9Y2L8 839 aa20.5■□□□□ 0.87
SYDE2-202ENST00000341460 SULT6B1Q6IMI4 303 aa20.5■□□□□ 0.87
SYDE2-202ENST00000341460 PLEKHH2Q8IVE3 1493 aa20.5■□□□□ 0.87
SYDE2-202ENST00000341460 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
SYDE2-202ENST00000341460 CAMK4Q16566 473 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 CFTRP13569 1480 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 ZSCAN31Q96LW9 406 aaPredicted RBP20.49■□□□□ 0.87
SYDE2-202ENST00000341460 SLC12A5Q9H2X9 1139 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 CCDC171Q6TFL3 1326 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 GCOM1H8Y6P7 765 aaPredicted RBP20.49■□□□□ 0.87
SYDE2-202ENST00000341460 MYZAPP0CAP1 466 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 RSRC1Q96IZ7 334 aaKnown RBP20.49■□□□□ 0.87
SYDE2-202ENST00000341460 C1orf115Q9H7X2 142 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 RAI14Q9P0K7 980 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 GOLGA6L9A6NEM1 432 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.49■□□□□ 0.87
SYDE2-202ENST00000341460 ERICH3Q5RHP9 1530 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 STRN4Q9NRL3 753 aa20.49■□□□□ 0.87
SYDE2-202ENST00000341460 CDK5RAP3Q96JB5 506 aa20.48■□□□□ 0.87
SYDE2-202ENST00000341460 BCCIPQ9P287 314 aaKnown RBP eCLIP20.48■□□□□ 0.87
SYDE2-202ENST00000341460 KIAA1107Q9UPP5 1409 aa20.48■□□□□ 0.87
SYDE2-202ENST00000341460 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
SYDE2-202ENST00000341460 ZNF397Q8NF99 534 aaPredicted RBP20.48■□□□□ 0.87
SYDE2-202ENST00000341460 CABP1Q9NZU7 370 aa20.48■□□□□ 0.87
SYDE2-202ENST00000341460 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 DAAM2Q86T65 1068 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 TSR2Q969E8 191 aaKnown RBP20.47■□□□□ 0.87
SYDE2-202ENST00000341460 SLC52A1Q9NWF4 448 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 C9orf84Q5VXU9 1444 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 EBAG9O00559 213 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 CABP4P57796 275 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 TBC1D2Q9BYX2 928 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 WDR63Q8IWG1 891 aa20.47■□□□□ 0.87
SYDE2-202ENST00000341460 SSFA2P28290 1259 aa20.46■□□□□ 0.87
SYDE2-202ENST00000341460 NAA25Q14CX7 972 aa20.46■□□□□ 0.87
SYDE2-202ENST00000341460 MSL1Q68DK7 614 aa20.46■□□□□ 0.87
SYDE2-202ENST00000341460 PAFAH1B1P43034 410 aa20.46■□□□□ 0.87
SYDE2-202ENST00000341460 CEP83Q9Y592 693 aa20.46■□□□□ 0.87
SYDE2-202ENST00000341460 SRCIN1Q9C0H9 1055 aa20.46■□□□□ 0.87
SYDE2-202ENST00000341460 HS1BP3Q53T59 392 aa20.46■□□□□ 0.87
SYDE2-202ENST00000341460 SPECC1Q5M775 1068 aa20.45■□□□□ 0.86
SYDE2-202ENST00000341460 C6orf163Q5TEZ5 329 aa20.45■□□□□ 0.86
SYDE2-202ENST00000341460 PANK2Q9BZ23 570 aa20.45■□□□□ 0.86
SYDE2-202ENST00000341460 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
SYDE2-202ENST00000341460 BANK1Q8NDB2 785 aa20.45■□□□□ 0.86
SYDE2-202ENST00000341460 EIF5P55010 431 aaKnown RBP20.44■□□□□ 0.86
SYDE2-202ENST00000341460 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
SYDE2-202ENST00000341460 TANGO6Q9C0B7 1094 aa20.44■□□□□ 0.86
SYDE2-202ENST00000341460 ATP2C2O75185 946 aa20.44■□□□□ 0.86
SYDE2-202ENST00000341460 SPA17Q15506 151 aa20.44■□□□□ 0.86
SYDE2-202ENST00000341460 OTUD6BQ8N6M0 293 aa20.44■□□□□ 0.86
SYDE2-202ENST00000341460 KRT18P05783 430 aaKnown RBP20.43■□□□□ 0.86
SYDE2-202ENST00000341460 FBF1Q8TES7 1133 aa20.43■□□□□ 0.86
SYDE2-202ENST00000341460 STK3Q13188 491 aa20.43■□□□□ 0.86
SYDE2-202ENST00000341460 CCDC6Q16204 474 aa20.43■□□□□ 0.86
SYDE2-202ENST00000341460 PPM1EQ8WY54 764 aa20.43■□□□□ 0.86
SYDE2-202ENST00000341460 NUP133Q8WUM0 1156 aa20.43■□□□□ 0.86
SYDE2-202ENST00000341460 DRC1Q96MC2 740 aa20.43■□□□□ 0.86
SYDE2-202ENST00000341460 NACAP1Q9BZK3 213 aa20.43■□□□□ 0.86
SYDE2-202ENST00000341460 BCAR3O75815 825 aa20.43■□□□□ 0.86
SYDE2-202ENST00000341460 STAMBPO95630 424 aa20.43■□□□□ 0.86
SYDE2-202ENST00000341460 TOM1L2Q6ZVM7 507 aa20.42■□□□□ 0.86
SYDE2-202ENST00000341460 PAF1Q8N7H5 531 aa20.42■□□□□ 0.86
SYDE2-202ENST00000341460 RTEL1-TNFRSF6BF6WH68 1400 aa20.42■□□□□ 0.86
SYDE2-202ENST00000341460 EHBP1L1Q8N3D4 1523 aa20.42■□□□□ 0.86
SYDE2-202ENST00000341460 CHD1LQ86WJ1 897 aa20.42■□□□□ 0.86
SYDE2-202ENST00000341460 KIF5BP33176 963 aa20.42■□□□□ 0.86
SYDE2-202ENST00000341460 GABPB1Q06547 395 aaPredicted RBP20.42■□□□□ 0.86
SYDE2-202ENST00000341460 CEP112Q8N8E3 955 aa20.42■□□□□ 0.86
SYDE2-202ENST00000341460 EFCAB5A4FU69 1503 aa20.41■□□□□ 0.86
SYDE2-202ENST00000341460 SLU7O95391 586 aaKnown RBP20.41■□□□□ 0.86
SYDE2-202ENST00000341460 ATF7IPQ6VMQ6 1270 aa20.41■□□□□ 0.86
SYDE2-202ENST00000341460 FAM114A1Q8IWE2 563 aa20.41■□□□□ 0.86
SYDE2-202ENST00000341460 NAA15Q9BXJ9 866 aaKnown RBP20.41■□□□□ 0.86
SYDE2-202ENST00000341460 SCAND2PQ9GZW5 306 aaPredicted RBP20.41■□□□□ 0.86
SYDE2-202ENST00000341460 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
SYDE2-202ENST00000341460 NBPF8Q3BBV2 869 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 SWAP70Q9UH65 585 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 CCDC121Q6ZUS5 278 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 HYPKQ9NX55 129 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 V9GYY5 206 aaPredicted RBP20.4■□□□□ 0.86
SYDE2-202ENST00000341460 MCM6Q14566 821 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 UBE4AQ14139 1066 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 ZSCAN23Q3MJ62 389 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 MAATS1Q7Z4T9 603 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 NBPF11Q86T75 865 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 HSF2BPO75031 334 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms