RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 CACNA1FO60840 1977 aa27.07■■□□□ 1.92
VRK2-201ENST00000340157 RGS12O14924 1447 aa27.06■■□□□ 1.92
VRK2-201ENST00000340157 MRC1P22897 1456 aa27.06■■□□□ 1.92
VRK2-201ENST00000340157 BTBD11A6QL63 1104 aa27.06■■□□□ 1.92
VRK2-201ENST00000340157 EIF4A1P60842 406 aaKnown RBP27.06■■□□□ 1.92
VRK2-201ENST00000340157 NRAPQ86VF7 1730 aa27.06■■□□□ 1.92
VRK2-201ENST00000340157 ABCC4O15439 1325 aa27.05■■□□□ 1.92
VRK2-201ENST00000340157 SOS1Q07889 1333 aaPredicted RBP27.04■■□□□ 1.92
VRK2-201ENST00000340157 IL2RBP14784 551 aa27.04■■□□□ 1.92
VRK2-201ENST00000340157 ITPRIPQ8IWB1 547 aa27.03■■□□□ 1.92
VRK2-201ENST00000340157 AAMPQ13685 434 aa27.02■■□□□ 1.92
VRK2-201ENST00000340157 WNK3Q9BYP7 1800 aa27.02■■□□□ 1.92
VRK2-201ENST00000340157 ZCRB1Q8TBF4 217 aaKnown RBP27.02■■□□□ 1.92
VRK2-201ENST00000340157 SLC4A2P04920 1241 aa27.01■■□□□ 1.91
VRK2-201ENST00000340157 SLC52A2Q9HAB3 445 aa27.01■■□□□ 1.91
VRK2-201ENST00000340157 PCDHB15Q9Y5E8 787 aa27.01■■□□□ 1.91
VRK2-201ENST00000340157 ADAMTS2O95450 1211 aa27■■□□□ 1.91
VRK2-201ENST00000340157 DCAF5Q96JK2 942 aa27■■□□□ 1.91
VRK2-201ENST00000340157 DDX19BQ9UMR2 479 aa27■■□□□ 1.91
VRK2-201ENST00000340157 PCDH11XQ9BZA7 1347 aa27■■□□□ 1.91
VRK2-201ENST00000340157 PCDH11YQ9BZA8 1340 aa27■■□□□ 1.91
VRK2-201ENST00000340157 API5Q9BZZ5 524 aaKnown RBP27■■□□□ 1.91
VRK2-201ENST00000340157 USP35Q9P2H5 1018 aa27■■□□□ 1.91
VRK2-201ENST00000340157 HEG1Q9ULI3 1381 aa26.99■■□□□ 1.91
VRK2-201ENST00000340157 G2E3Q7L622 706 aa26.99■■□□□ 1.91
VRK2-201ENST00000340157 DISP2A7MBM2 1401 aa26.98■■□□□ 1.91
VRK2-201ENST00000340157 IGHDP01880 384 aa26.98■■□□□ 1.91
VRK2-201ENST00000340157 CCDC30Q5VVM6 783 aa26.98■■□□□ 1.91
VRK2-201ENST00000340157 CENPQQ7L2Z9 268 aaPredicted RBP26.98■■□□□ 1.91
VRK2-201ENST00000340157 CERKQ8TCT0 537 aa26.98■■□□□ 1.91
VRK2-201ENST00000340157 NECTIN2Q92692 538 aa26.98■■□□□ 1.91
VRK2-201ENST00000340157 PTPRCP08575 1304 aa26.97■■□□□ 1.91
VRK2-201ENST00000340157 HSP90AB1P08238 724 aaKnown RBP26.96■■□□□ 1.91
VRK2-201ENST00000340157 HOXB7P09629 217 aa26.96■■□□□ 1.91
VRK2-201ENST00000340157 NFATC2IPQ8NCF5 419 aa26.96■■□□□ 1.91
VRK2-201ENST00000340157 NWD2Q9ULI1 1742 aa26.96■■□□□ 1.91
VRK2-201ENST00000340157 NUTM2BA6NNL0 878 aaPredicted RBP26.96■■□□□ 1.91
VRK2-201ENST00000340157 NUTM2EB1AL46 878 aaPredicted RBP26.96■■□□□ 1.91
VRK2-201ENST00000340157 NUTM2AQ8IVF1 878 aaPredicted RBP26.96■■□□□ 1.91
VRK2-201ENST00000340157 ZBTB40Q9NUA8 1239 aa26.96■■□□□ 1.91
VRK2-201ENST00000340157 C5P01031 1676 aa26.95■■□□□ 1.91
VRK2-201ENST00000340157 TOGARAM1Q9Y4F4 1720 aa26.95■■□□□ 1.9
VRK2-201ENST00000340157 STK31Q9BXU1 1019 aa26.94■■□□□ 1.9
VRK2-201ENST00000340157 NKX1-1Q15270 411 aaPredicted RBP26.93■■□□□ 1.9
VRK2-201ENST00000340157 HDGFL1Q5TGJ6 251 aa26.93■■□□□ 1.9
VRK2-201ENST00000340157 SLC39A6Q13433 755 aa26.93■■□□□ 1.9
VRK2-201ENST00000340157 TSHZ2Q9NRE2 1034 aa26.93■■□□□ 1.9
VRK2-201ENST00000340157 ZBTB7BO15156 539 aaPredicted RBP26.92■■□□□ 1.9
VRK2-201ENST00000340157 GIGYF1O75420 1035 aaPredicted RBP26.92■■□□□ 1.9
VRK2-201ENST00000340157 ZNF790Q6PG37 636 aa26.92■■□□□ 1.9
VRK2-201ENST00000340157 SKAP1Q86WV1 359 aa26.92■■□□□ 1.9
VRK2-201ENST00000340157 SLIT2O94813 1529 aa26.92■■□□□ 1.9
VRK2-201ENST00000340157 GLI3P10071 1580 aa26.92■■□□□ 1.9
VRK2-201ENST00000340157 PRAMEF22A3QJZ6 481 aa26.91■■□□□ 1.9
VRK2-201ENST00000340157 INTS3Q68E01 1043 aaKnown RBP26.91■■□□□ 1.9
VRK2-201ENST00000340157 N4BP2Q86UW6 1770 aaPredicted RBP26.9■■□□□ 1.9
VRK2-201ENST00000340157 DDX54Q8TDD1 881 aaKnown RBP26.9■■□□□ 1.9
VRK2-201ENST00000340157 JCADQ9P266 1359 aa26.9■■□□□ 1.9
VRK2-201ENST00000340157 FLIIQ13045 1269 aa26.89■■□□□ 1.9
VRK2-201ENST00000340157 PAPPAQ13219 1627 aa26.89■■□□□ 1.9
VRK2-201ENST00000340157 EIF2S2P20042 333 aaKnown RBP26.89■■□□□ 1.89
VRK2-201ENST00000340157 UBR2Q8IWV8 1755 aa26.88■■□□□ 1.89
VRK2-201ENST00000340157 CABP4P57796 275 aa26.87■■□□□ 1.89
VRK2-201ENST00000340157 CHPF2Q9P2E5 772 aa26.87■■□□□ 1.89
VRK2-201ENST00000340157 F6X3S4 739 aa26.86■■□□□ 1.89
VRK2-201ENST00000340157 SPATA31A1Q5TZJ5 1347 aa26.85■■□□□ 1.89
VRK2-201ENST00000340157 PHAXQ9H814 394 aaKnown RBP26.85■■□□□ 1.89
VRK2-201ENST00000340157 ERVV-2B6SEH9 535 aa26.85■■□□□ 1.89
VRK2-201ENST00000340157 ZNF496Q96IT1 587 aaPredicted RBP26.85■■□□□ 1.89
VRK2-201ENST00000340157 ITGB4P16144 1822 aa26.84■■□□□ 1.89
VRK2-201ENST00000340157 LRP6O75581 1613 aa26.83■■□□□ 1.89
VRK2-201ENST00000340157 FKBP5Q13451 457 aaPredicted RBP26.83■■□□□ 1.88
VRK2-201ENST00000340157 ANXA1P04083 346 aa26.82■■□□□ 1.88
VRK2-201ENST00000340157 LAMB4A4D0S4 1761 aa26.82■■□□□ 1.88
VRK2-201ENST00000340157 TNS2Q63HR2 1409 aa26.81■■□□□ 1.88
VRK2-201ENST00000340157 C1orf115Q9H7X2 142 aa26.81■■□□□ 1.88
VRK2-201ENST00000340157 HDAC1Q13547 482 aaPredicted RBP26.81■■□□□ 1.88
VRK2-201ENST00000340157 PROSER3Q2NL68 480 aa26.81■■□□□ 1.88
VRK2-201ENST00000340157 RWDD1Q9H446 243 aaPredicted RBP26.81■■□□□ 1.88
VRK2-201ENST00000340157 SPATA31A5Q5VU36 1347 aa26.8■■□□□ 1.88
VRK2-201ENST00000340157 SPATA31A7Q8IWB4 1347 aa26.8■■□□□ 1.88
VRK2-201ENST00000340157 KCPQ6ZWJ8 1503 aa26.8■■□□□ 1.88
VRK2-201ENST00000340157 CHMP4AQ9BY43 222 aa26.8■■□□□ 1.88
VRK2-201ENST00000340157 TTC5Q8N0Z6 440 aa26.79■■□□□ 1.88
VRK2-201ENST00000340157 CHMP4BQ9H444 224 aaKnown RBP26.79■■□□□ 1.88
VRK2-201ENST00000340157 PXDNLA1KZ92 1463 aa26.79■■□□□ 1.88
VRK2-201ENST00000340157 BCL9LQ86UU0 1499 aa26.79■■□□□ 1.88
VRK2-201ENST00000340157 SLC4A10Q6U841 1118 aa26.79■■□□□ 1.88
VRK2-201ENST00000340157 DBF4Q9UBU7 674 aaPredicted RBP26.79■■□□□ 1.88
VRK2-201ENST00000340157 THRAP3Q9Y2W1 955 aaKnown RBP26.78■■□□□ 1.88
VRK2-201ENST00000340157 PDIA6Q15084 440 aa26.77■■□□□ 1.88
VRK2-201ENST00000340157 FMNL2Q96PY5 1086 aa26.77■■□□□ 1.88
VRK2-201ENST00000340157 CCT4P50991 539 aaKnown RBP26.76■■□□□ 1.88
VRK2-201ENST00000340157 C8orf37Q96NL8 207 aa26.76■■□□□ 1.87
VRK2-201ENST00000340157 MEIS3Q99687 375 aa26.76■■□□□ 1.87
VRK2-201ENST00000340157 SPATA31A6Q5VVP1 1343 aa26.76■■□□□ 1.87
VRK2-201ENST00000340157 EXOC5O00471 708 aa26.75■■□□□ 1.87
VRK2-201ENST00000340157 HSPA1LP34931 641 aa26.75■■□□□ 1.87
VRK2-201ENST00000340157 ATP10DQ9P241 1426 aa26.75■■□□□ 1.87
VRK2-201ENST00000340157 SNRPA1P09661 255 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms