RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 DDX19BQ9UMR2 479 aa14.55□□□□□ -0.08
HDAC6-201ENST00000334136 BCAR3O75815 825 aa14.55□□□□□ -0.08
HDAC6-201ENST00000334136 ZNF772Q68DY9 489 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-201ENST00000334136 MBIPQ9NS73 344 aa14.55□□□□□ -0.08
HDAC6-201ENST00000334136 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
HDAC6-201ENST00000334136 ARHGEF28Q8N1W1 1705 aaKnown RBP14.55□□□□□ -0.08
HDAC6-201ENST00000334136 RNMTO43148 476 aaKnown RBP14.55□□□□□ -0.08
HDAC6-201ENST00000334136 IL16Q14005 1332 aa14.54□□□□□ -0.08
HDAC6-201ENST00000334136 CCDC27Q2M243 656 aa14.54□□□□□ -0.08
HDAC6-201ENST00000334136 FAM177BA6PVY3 158 aa14.54□□□□□ -0.08
HDAC6-201ENST00000334136 SMARCC1Q92922 1105 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-201ENST00000334136 TEX13AQ9BXU3 409 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-201ENST00000334136 PANK1Q8TE04 598 aa14.53□□□□□ -0.08
HDAC6-201ENST00000334136 NOB1Q9ULX3 412 aaKnown RBP14.53□□□□□ -0.08
HDAC6-201ENST00000334136 IGSF1Q8N6C5 1336 aa14.53□□□□□ -0.08
HDAC6-201ENST00000334136 AFF2P51816 1311 aa14.52□□□□□ -0.08
HDAC6-201ENST00000334136 SNRPA1P09661 255 aaKnown RBP14.52□□□□□ -0.08
HDAC6-201ENST00000334136 LGR6Q9HBX8 967 aa14.52□□□□□ -0.09
HDAC6-201ENST00000334136 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
HDAC6-201ENST00000334136 PRIM1P49642 420 aaKnown RBP14.51□□□□□ -0.09
HDAC6-201ENST00000334136 DBF4Q9UBU7 674 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-201ENST00000334136 RXRBP28702 533 aa14.5□□□□□ -0.09
HDAC6-201ENST00000334136 SSH1Q8WYL5 1049 aa14.5□□□□□ -0.09
HDAC6-201ENST00000334136 IFT172Q9UG01 1749 aa14.49□□□□□ -0.09
HDAC6-201ENST00000334136 BCL11BQ9C0K0 894 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-201ENST00000334136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.49□□□□□ -0.091e-6■■□□□ 12.3
HDAC6-201ENST00000334136 CDK12Q9NYV4 1490 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-201ENST00000334136 UBTFL1P0CB47 393 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-201ENST00000334136 ATP6V1AP38606 617 aa14.49□□□□□ -0.09
HDAC6-201ENST00000334136 GORABQ5T7V8 394 aa14.49□□□□□ -0.09
HDAC6-201ENST00000334136 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
HDAC6-201ENST00000334136 BLMP54132 1417 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-201ENST00000334136 ATF7IPQ6VMQ6 1270 aa14.48□□□□□ -0.09
HDAC6-201ENST00000334136 PHKG2P15735 406 aa14.48□□□□□ -0.09
HDAC6-201ENST00000334136 FOXD4L5Q5VV16 416 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-201ENST00000334136 FOXD4L4Q8WXT5 416 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-201ENST00000334136 SRCIN1Q9C0H9 1055 aa14.48□□□□□ -0.09
HDAC6-201ENST00000334136 GNAI3P08754 354 aa14.47□□□□□ -0.09
HDAC6-201ENST00000334136 RARSP54136 660 aaKnown RBP14.47□□□□□ -0.09
HDAC6-201ENST00000334136 AK7Q96M32 723 aa14.47□□□□□ -0.09
HDAC6-201ENST00000334136 ALDH1L2Q3SY69 923 aa14.47□□□□□ -0.09
HDAC6-201ENST00000334136 HYPKQ9NX55 129 aa14.47□□□□□ -0.09
HDAC6-201ENST00000334136 ZPR1O75312 459 aa14.46□□□□□ -0.09
HDAC6-201ENST00000334136 TRIM35Q9UPQ4 493 aa14.46□□□□□ -0.09
HDAC6-201ENST00000334136 USP19O94966 1318 aa14.46□□□□□ -0.09
HDAC6-201ENST00000334136 ANXA1P04083 346 aa14.46□□□□□ -0.09
HDAC6-201ENST00000334136 SLC52A2Q9HAB3 445 aa14.46□□□□□ -0.09
HDAC6-201ENST00000334136 OVOS2A0A0J9YW53 1432 aa14.46□□□□□ -0.09
HDAC6-201ENST00000334136 OVOS2Q6IE36 1432 aa14.46□□□□□ -0.09
HDAC6-201ENST00000334136 CCT4P50991 539 aaKnown RBP14.46□□□□□ -0.1
HDAC6-201ENST00000334136 PDE3AQ14432 1141 aa14.46□□□□□ -0.1
HDAC6-201ENST00000334136 C8orf58Q8NAV2 365 aa14.46□□□□□ -0.1
HDAC6-201ENST00000334136 THRAP3Q9Y2W1 955 aaKnown RBP14.46□□□□□ -0.1
HDAC6-201ENST00000334136 DDX49Q9Y6V7 483 aaKnown RBP14.46□□□□□ -0.1
HDAC6-201ENST00000334136 HSP90B1P14625 803 aaKnown RBP14.45□□□□□ -0.1
HDAC6-201ENST00000334136 ZNF790Q6PG37 636 aa14.45□□□□□ -0.1
HDAC6-201ENST00000334136 BICDL1Q6ZP65 573 aa14.45□□□□□ -0.1
HDAC6-201ENST00000334136 ZNF142P52746 1687 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-201ENST00000334136 NOL8Q76FK4 1167 aaKnown RBP14.45□□□□□ -0.1
HDAC6-201ENST00000334136 IL17REQ8NFR9 667 aa14.45□□□□□ -0.1
HDAC6-201ENST00000334136 POLR1AO95602 1720 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-201ENST00000334136 ERVV-2B6SEH9 535 aa14.44□□□□□ -0.1
HDAC6-201ENST00000334136 KRT24Q2M2I5 525 aa14.44□□□□□ -0.1
HDAC6-201ENST00000334136 SEPT12Q8IYM1 358 aa14.44□□□□□ -0.1
HDAC6-201ENST00000334136 ZNF652Q9Y2D9 606 aa14.44□□□□□ -0.1
HDAC6-201ENST00000334136 G3V3G9 751 aa14.44□□□□□ -0.1
HDAC6-201ENST00000334136 FAM182BQ5T319 152 aa14.44□□□□□ -0.1
HDAC6-201ENST00000334136 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
HDAC6-201ENST00000334136 DDX11L8A8MPP1 907 aa14.43□□□□□ -0.1
HDAC6-201ENST00000334136 FLIIQ13045 1269 aa14.43□□□□□ -0.1
HDAC6-201ENST00000334136 ZBTB3Q9H5J0 574 aa14.43□□□□□ -0.1
HDAC6-201ENST00000334136 PLEKHF1Q96S99 279 aa14.43□□□□□ -0.1
HDAC6-201ENST00000334136 FOXD4L6Q3SYB3 417 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-201ENST00000334136 C20orf194Q5TEA3 1177 aa14.42□□□□□ -0.1
HDAC6-201ENST00000334136 FOXD4L3Q6VB84 417 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-201ENST00000334136 TAOK2Q9UL54 1235 aa14.42□□□□□ -0.1
HDAC6-201ENST00000334136 GJD4Q96KN9 370 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-201ENST00000334136 BABAM1Q9NWV8 329 aa14.42□□□□□ -0.1
HDAC6-201ENST00000334136 ITSN1Q15811 1721 aa14.42□□□□□ -0.1
HDAC6-201ENST00000334136 CHL1O00533 1208 aa14.42□□□□□ -0.1
HDAC6-201ENST00000334136 KRT27Q7Z3Y8 459 aa14.42□□□□□ -0.1
HDAC6-201ENST00000334136 CHMP5Q9NZZ3 219 aa14.42□□□□□ -0.1
HDAC6-201ENST00000334136 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-201ENST00000334136 PNPLA6Q8IY17 1366 aa14.42□□□□□ -0.1
HDAC6-201ENST00000334136 NRXN3Q9Y4C0 1643 aa14.42□□□□□ -0.1
HDAC6-201ENST00000334136 PHF14O94880 888 aa14.41□□□□□ -0.1
HDAC6-201ENST00000334136 ANKRD45Q5TZF3 282 aa14.41□□□□□ -0.1
HDAC6-201ENST00000334136 CHPF2Q9P2E5 772 aa14.41□□□□□ -0.1
HDAC6-201ENST00000334136 PPP1R1BQ9UD71 204 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-201ENST00000334136 F6X3S4 739 aa14.41□□□□□ -0.1
HDAC6-201ENST00000334136 RBM6P78332 1123 aaKnown RBP14.41□□□□□ -0.1
HDAC6-201ENST00000334136 G3BP1Q13283 466 aaKnown RBP eCLIP14.41□□□□□ -0.18e-6■□□□□ 9
HDAC6-201ENST00000334136 TSPYL6Q8N831 410 aa14.41□□□□□ -0.1
HDAC6-201ENST00000334136 PIP4K2AP48426 406 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-201ENST00000334136 RFC4P35249 363 aa14.4□□□□□ -0.1
HDAC6-201ENST00000334136 DNAAF4Q8WXU2 420 aa14.4□□□□□ -0.1
HDAC6-201ENST00000334136 MYD88Q99836 296 aa14.4□□□□□ -0.1
HDAC6-201ENST00000334136 CCNL1Q9UK58 526 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-201ENST00000334136 GNAI2P04899 355 aa14.4□□□□□ -0.1
HDAC6-201ENST00000334136 GPATCH3Q96I76 525 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms