RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 IP6K1Q92551 441 aa23.41■■□□□ 1.34
RFTN1-201ENST00000334133 LRRFIP2Q9Y608 721 aaKnown RBP23.41■■□□□ 1.34
RFTN1-201ENST00000334133 HTATSF1O43719 755 aaKnown RBP23.4■■□□□ 1.34
RFTN1-201ENST00000334133 MPRIPQ6WCQ1 1025 aa23.4■■□□□ 1.34
RFTN1-201ENST00000334133 K7ELQ4 463 aaPredicted RBP23.37■■□□□ 1.33
RFTN1-201ENST00000334133 USP26Q9BXU7 913 aa23.37■■□□□ 1.33
RFTN1-201ENST00000334133 PDE1AP54750 535 aa23.37■■□□□ 1.33
RFTN1-201ENST00000334133 TNPO1Q92973 898 aaKnown RBP23.37■■□□□ 1.33
RFTN1-201ENST00000334133 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
RFTN1-201ENST00000334133 TRAK2O60296 914 aa23.35■■□□□ 1.33
RFTN1-201ENST00000334133 DDIT3P35638 169 aa23.35■■□□□ 1.33
RFTN1-201ENST00000334133 USP44Q9H0E7 712 aa23.35■■□□□ 1.33
RFTN1-201ENST00000334133 IL1RAPL2Q9NP60 686 aa23.35■■□□□ 1.33
RFTN1-201ENST00000334133 CHPF2Q9P2E5 772 aa23.35■■□□□ 1.33
RFTN1-201ENST00000334133 LTN1O94822 1766 aa23.35■■□□□ 1.33
RFTN1-201ENST00000334133 GCP02774 474 aa23.34■■□□□ 1.33
RFTN1-201ENST00000334133 GNAI3P08754 354 aa23.34■■□□□ 1.33
RFTN1-201ENST00000334133 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.33
RFTN1-201ENST00000334133 LRRCC1Q9C099 1032 aa23.33■■□□□ 1.32
RFTN1-201ENST00000334133 UBTFL1P0CB47 393 aaPredicted RBP23.32■■□□□ 1.32
RFTN1-201ENST00000334133 TEFQ10587 303 aa23.32■■□□□ 1.32
RFTN1-201ENST00000334133 RILPL2Q969X0 211 aa23.32■■□□□ 1.32
RFTN1-201ENST00000334133 CASC1Q6TDU7 716 aa23.32■■□□□ 1.32
RFTN1-201ENST00000334133 EIF4A1P60842 406 aaKnown RBP23.31■■□□□ 1.32
RFTN1-201ENST00000334133 ATP8B2P98198 1209 aa23.31■■□□□ 1.32
RFTN1-201ENST00000334133 CHD2O14647 1828 aaKnown RBP23.31■■□□□ 1.32
RFTN1-201ENST00000334133 TRIM6-TRIM34B2RNG4 842 aa23.31■■□□□ 1.32
RFTN1-201ENST00000334133 AXIN2Q9Y2T1 843 aa23.31■■□□□ 1.32
RFTN1-201ENST00000334133 RGPD2P0DJD1 1756 aa23.3■■□□□ 1.32
RFTN1-201ENST00000334133 BTBD11A6QL63 1104 aa23.3■■□□□ 1.32
RFTN1-201ENST00000334133 SSFA2P28290 1259 aa23.3■■□□□ 1.32
RFTN1-201ENST00000334133 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
RFTN1-201ENST00000334133 PRAMEF22A3QJZ6 481 aa23.3■■□□□ 1.32
RFTN1-201ENST00000334133 PI4KAP2A4QPH2 592 aa23.3■■□□□ 1.32
RFTN1-201ENST00000334133 ZC3H6P61129 1189 aaKnown RBP23.3■■□□□ 1.32
RFTN1-201ENST00000334133 PI4KAP1Q8N8J0 262 aa23.3■■□□□ 1.32
RFTN1-201ENST00000334133 NBPF7P0C2Y1 421 aaPredicted RBP23.29■■□□□ 1.32
RFTN1-201ENST00000334133 NUTM1Q86Y26 1132 aa23.29■■□□□ 1.32
RFTN1-201ENST00000334133 LRRC37A3O60309 1634 aa23.29■■□□□ 1.32
RFTN1-201ENST00000334133 MAP4K4O95819 1239 aaPredicted RBP23.29■■□□□ 1.32
RFTN1-201ENST00000334133 KCNH5Q8NCM2 988 aa23.29■■□□□ 1.32
RFTN1-201ENST00000334133 FAM208AQ9UK61 1670 aaKnown RBP23.29■■□□□ 1.32
RFTN1-201ENST00000334133 MX1P20591 662 aa23.28■■□□□ 1.32
RFTN1-201ENST00000334133 ADGRL3Q9HAR2 1447 aa23.28■■□□□ 1.32
RFTN1-201ENST00000334133 AK9Q5TCS8 1911 aa23.28■■□□□ 1.32
RFTN1-201ENST00000334133 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
RFTN1-201ENST00000334133 ANKRD24Q8TF21 1146 aa23.28■■□□□ 1.32
RFTN1-201ENST00000334133 NFAT5O94916 1531 aa23.27■■□□□ 1.32
RFTN1-201ENST00000334133 PPP1R42Q7Z4L9 355 aa23.27■■□□□ 1.32
RFTN1-201ENST00000334133 PROSER2Q86WR7 435 aaPredicted RBP23.27■■□□□ 1.32
RFTN1-201ENST00000334133 RABEP1Q15276 862 aa23.27■■□□□ 1.32
RFTN1-201ENST00000334133 SRCIN1Q9C0H9 1055 aa23.27■■□□□ 1.32
RFTN1-201ENST00000334133 CEMIPQ8WUJ3 1361 aa23.26■■□□□ 1.31
RFTN1-201ENST00000334133 ERC2O15083 957 aa23.26■■□□□ 1.31
RFTN1-201ENST00000334133 SURF6O75683 361 aaKnown RBP23.26■■□□□ 1.31
RFTN1-201ENST00000334133 RAB3GAP1Q15042 981 aa23.26■■□□□ 1.31
RFTN1-201ENST00000334133 ARHGEF25Q86VW2 580 aa23.25■■□□□ 1.31
RFTN1-201ENST00000334133 PROSER3Q2NL68 480 aa23.25■■□□□ 1.31
RFTN1-201ENST00000334133 PLEKHO1Q53GL0 409 aaPredicted RBP23.25■■□□□ 1.31
RFTN1-201ENST00000334133 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
RFTN1-201ENST00000334133 PKP1Q13835 747 aa23.24■■□□□ 1.31
RFTN1-201ENST00000334133 NOL8Q76FK4 1167 aaKnown RBP23.24■■□□□ 1.31
RFTN1-201ENST00000334133 SRGAP3O43295 1099 aa23.24■■□□□ 1.31
RFTN1-201ENST00000334133 REC8O95072 547 aa23.24■■□□□ 1.31
RFTN1-201ENST00000334133 AKAP4Q5JQC9 854 aa23.24■■□□□ 1.31
RFTN1-201ENST00000334133 KRT28Q7Z3Y7 464 aa23.24■■□□□ 1.31
RFTN1-201ENST00000334133 IBTKQ9P2D0 1353 aaPredicted RBP23.24■■□□□ 1.31
RFTN1-201ENST00000334133 PXDNQ92626 1479 aa23.24■■□□□ 1.31
RFTN1-201ENST00000334133 OSBPL3Q9H4L5 887 aa23.23■■□□□ 1.31
RFTN1-201ENST00000334133 PANK2Q9BZ23 570 aa23.23■■□□□ 1.31
RFTN1-201ENST00000334133 NPHP4O75161 1426 aaPredicted RBP23.23■■□□□ 1.31
RFTN1-201ENST00000334133 DDX11L8A8MPP1 907 aa23.22■■□□□ 1.31
RFTN1-201ENST00000334133 ZGPATQ8N5A5 531 aaKnown RBP23.22■■□□□ 1.31
RFTN1-201ENST00000334133 SALL3Q9BXA9 1300 aa23.22■■□□□ 1.31
RFTN1-201ENST00000334133 DNAAF4Q8WXU2 420 aa23.22■■□□□ 1.31
RFTN1-201ENST00000334133 RNMTO43148 476 aaKnown RBP23.22■■□□□ 1.31
RFTN1-201ENST00000334133 BABAM1Q9NWV8 329 aa23.22■■□□□ 1.31
RFTN1-201ENST00000334133 GOLGA6L3A6NEY3 463 aa23.21■■□□□ 1.31
RFTN1-201ENST00000334133 ANO2Q9NQ90 1003 aa23.21■■□□□ 1.31
RFTN1-201ENST00000334133 CIZ1Q9ULV3 898 aaPredicted RBP23.21■■□□□ 1.31
RFTN1-201ENST00000334133 GBP4Q96PP9 640 aa23.21■■□□□ 1.31
RFTN1-201ENST00000334133 XRCC6P12956 609 aaKnown RBP eCLIP23.2■■□□□ 1.3
RFTN1-201ENST00000334133 AIMP1Q12904 312 aaKnown RBP23.2■■□□□ 1.3
RFTN1-201ENST00000334133 BEND3Q5T5X7 828 aa23.2■■□□□ 1.3
RFTN1-201ENST00000334133 IL25Q9H293 177 aa23.2■■□□□ 1.3
RFTN1-201ENST00000334133 PALD1Q9ULE6 856 aa23.2■■□□□ 1.3
RFTN1-201ENST00000334133 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
RFTN1-201ENST00000334133 FOXD4L5Q5VV16 416 aaPredicted RBP23.19■■□□□ 1.3
RFTN1-201ENST00000334133 CABLES1Q8TDN4 633 aa23.19■■□□□ 1.3
RFTN1-201ENST00000334133 FOXD4L4Q8WXT5 416 aaPredicted RBP23.19■■□□□ 1.3
RFTN1-201ENST00000334133 CHAMP1Q96JM3 812 aa23.19■■□□□ 1.3
RFTN1-201ENST00000334133 ESYT1Q9BSJ8 1104 aa23.19■■□□□ 1.3
RFTN1-201ENST00000334133 NEK4P51957 841 aa23.19■■□□□ 1.3
RFTN1-201ENST00000334133 SLC39A6Q13433 755 aa23.19■■□□□ 1.3
RFTN1-201ENST00000334133 SSH3Q8TE77 659 aa23.19■■□□□ 1.3
RFTN1-201ENST00000334133 CWF19L2Q2TBE0 894 aaKnown RBP23.18■■□□□ 1.3
RFTN1-201ENST00000334133 CHMLP26374 656 aa23.18■■□□□ 1.3
RFTN1-201ENST00000334133 ST18O60284 1047 aa23.17■■□□□ 1.3
RFTN1-201ENST00000334133 MAP3K2Q9Y2U5 619 aa23.17■■□□□ 1.3
RFTN1-201ENST00000334133 USP54Q70EL1 1684 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms