RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 NOL8Q76FK4 1167 aaKnown RBP15.13■□□□□ 0.01
VPS33B-201ENST00000333371 ISY1Q9ULR0 285 aaKnown RBP15.13■□□□□ 0.01
VPS33B-201ENST00000333371 ZDHHC9Q9Y397 364 aa15.13■□□□□ 0.01
VPS33B-201ENST00000333371 CHD2O14647 1828 aaKnown RBP15.13■□□□□ 0.01
VPS33B-201ENST00000333371 CYP2E1P05181 493 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-201ENST00000333371 CLEC17AQ6ZS10 378 aa15.13■□□□□ 0.01
VPS33B-201ENST00000333371 C14orf37Q86TY3 774 aa15.13■□□□□ 0.01
VPS33B-201ENST00000333371 LMBRD1Q9NUN5 540 aa15.13■□□□□ 0.01
VPS33B-201ENST00000333371 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
VPS33B-201ENST00000333371 NASPP49321 788 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-201ENST00000333371 NUTM2GQ5VZR2 741 aa15.13■□□□□ 0.01
VPS33B-201ENST00000333371 RTF1Q92541 710 aaKnown RBP15.13■□□□□ 0.01
VPS33B-201ENST00000333371 SBNO1A3KN83 1393 aa15.12■□□□□ 0.01
VPS33B-201ENST00000333371 FLT4P35916 1363 aa15.12■□□□□ 0.01
VPS33B-201ENST00000333371 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
VPS33B-201ENST00000333371 CASC1Q6TDU7 716 aa15.12■□□□□ 0.01
VPS33B-201ENST00000333371 PNMA6EA0A0J9YXQ4 647 aa15.12■□□□□ 0.01
VPS33B-201ENST00000333371 ERC2O15083 957 aa15.12■□□□□ 0.01
VPS33B-201ENST00000333371 PRPF40AO75400 957 aaKnown RBP15.12■□□□□ 0.01
VPS33B-201ENST00000333371 ADAMTSL3P82987 1691 aa15.12■□□□□ 0.01
VPS33B-201ENST00000333371 ST18O60284 1047 aa15.11■□□□□ 0.01
VPS33B-201ENST00000333371 RBM33Q96EV2 1170 aaKnown RBP15.11■□□□□ 0.01
VPS33B-201ENST00000333371 EYA1Q99502 592 aa15.11■□□□□ 0.01
VPS33B-201ENST00000333371 HAP1P54257 671 aaPredicted RBP15.11■□□□□ 0.01
VPS33B-201ENST00000333371 NUCB2P80303 420 aa15.11■□□□□ 0.01
VPS33B-201ENST00000333371 ABTB2Q8N961 1025 aa15.11■□□□□ 0.01
VPS33B-201ENST00000333371 PALD1Q9ULE6 856 aa15.11■□□□□ 0.01
VPS33B-201ENST00000333371 ARHGEF10O15013 1369 aa15.1■□□□□ 0.01
VPS33B-201ENST00000333371 PTMSP20962 102 aa15.1■□□□□ 0.01
VPS33B-201ENST00000333371 NEK4P51957 841 aa15.1■□□□□ 0.01
VPS33B-201ENST00000333371 HMMRO75330 724 aa15.1■□□□□ 0.01
VPS33B-201ENST00000333371 REC8O95072 547 aa15.1■□□□□ 0.01
VPS33B-201ENST00000333371 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
VPS33B-201ENST00000333371 ZSCAN23Q3MJ62 389 aa15.1■□□□□ 0.01
VPS33B-201ENST00000333371 NSFL1CQ9UNZ2 370 aaKnown RBP15.1■□□□□ 0.01
VPS33B-201ENST00000333371 GPT2Q8TD30 523 aa15.09■□□□□ 0.01
VPS33B-201ENST00000333371 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
VPS33B-201ENST00000333371 PHF8Q9UPP1 1060 aa15.09■□□□□ 0.01
VPS33B-201ENST00000333371 GNAI2P04899 355 aa15.08■□□□□ 0.01
VPS33B-201ENST00000333371 UNC5CLQ8IV45 518 aa15.08■□□□□ 0.01
VPS33B-201ENST00000333371 FLIIQ13045 1269 aa15.08■□□□□ 0
VPS33B-201ENST00000333371 LTV1Q96GA3 475 aaPredicted RBP15.08■□□□□ 0
VPS33B-201ENST00000333371 TRIM6-TRIM34B2RNG4 842 aa15.07■□□□□ 0
VPS33B-201ENST00000333371 CCT4P50991 539 aaKnown RBP15.07■□□□□ 0
VPS33B-201ENST00000333371 FOXD4L6Q3SYB3 417 aaPredicted RBP15.07■□□□□ 0
VPS33B-201ENST00000333371 FOXD4L3Q6VB84 417 aaPredicted RBP15.07■□□□□ 0
VPS33B-201ENST00000333371 RBSNQ9H1K0 784 aa15.07■□□□□ 0
VPS33B-201ENST00000333371 TUBGCP6Q96RT7 1819 aa15.07■□□□□ 0
VPS33B-201ENST00000333371 PRIM1P49642 420 aaKnown RBP15.07■□□□□ 0
VPS33B-201ENST00000333371 TMX3Q96JJ7 454 aa15.07■□□□□ 0
VPS33B-201ENST00000333371 STK31Q9BXU1 1019 aa15.07■□□□□ 0
VPS33B-201ENST00000333371 IL25Q9H293 177 aa15.07■□□□□ 0
VPS33B-201ENST00000333371 LRRFIP2Q9Y608 721 aaKnown RBP15.07■□□□□ 0
VPS33B-201ENST00000333371 LRRCC1Q9C099 1032 aa15.06■□□□□ 0
VPS33B-201ENST00000333371 OSBPL3Q9H4L5 887 aa15.06■□□□□ 0
VPS33B-201ENST00000333371 IL1RAPL2Q9NP60 686 aa15.06■□□□□ 0
VPS33B-201ENST00000333371 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
VPS33B-201ENST00000333371 SALL3Q9BXA9 1300 aa15.06■□□□□ 0
VPS33B-201ENST00000333371 NPHP4O75161 1426 aaPredicted RBP15.06■□□□□ 0
VPS33B-201ENST00000333371 MAP4K4O95819 1239 aaPredicted RBP15.06■□□□□ 0
VPS33B-201ENST00000333371 MX1P20591 662 aa15.06■□□□□ 0
VPS33B-201ENST00000333371 ESCO1Q5FWF5 840 aa15.06■□□□□ 0
VPS33B-201ENST00000333371 ESYT1Q9BSJ8 1104 aa15.06■□□□□ 0
VPS33B-201ENST00000333371 CCDC173Q0VFZ6 552 aa15.05■□□□□ 0
VPS33B-201ENST00000333371 UPF3BQ9BZI7 483 aaKnown RBP15.05■□□□□ 0
VPS33B-201ENST00000333371 CWC22Q9HCG8 908 aaKnown RBP15.05■□□□□ 0
VPS33B-201ENST00000333371 TCHHQ07283 1943 aa15.05■□□□□ 0
VPS33B-201ENST00000333371 USHBP1Q8N6Y0 703 aa15.05■□□□□ -0
VPS33B-201ENST00000333371 PPP1R9BQ96SB3 815 aa15.05■□□□□ -0
VPS33B-201ENST00000333371 TMEM63CQ9P1W3 806 aa15.05■□□□□ -0
VPS33B-201ENST00000333371 HOXC9P31274 260 aa15.04■□□□□ -0
VPS33B-201ENST00000333371 ZNF445P59923 1031 aa15.04■□□□□ -0
VPS33B-201ENST00000333371 PSME1Q06323 249 aa15.04■□□□□ -0
VPS33B-201ENST00000333371 ADGRL3Q9HAR2 1447 aa15.04■□□□□ -0
VPS33B-201ENST00000333371 IGSF1Q8N6C5 1336 aa15.04■□□□□ -0
VPS33B-201ENST00000333371 IBTKQ9P2D0 1353 aaPredicted RBP15.04■□□□□ -0
VPS33B-201ENST00000333371 CHMLP26374 656 aa15.03■□□□□ -0
VPS33B-201ENST00000333371 NUTM1Q86Y26 1132 aa15.03■□□□□ -0
VPS33B-201ENST00000333371 PHAXQ9H814 394 aaKnown RBP15.03■□□□□ -0
VPS33B-201ENST00000333371 FAM208AQ9UK61 1670 aaKnown RBP15.03■□□□□ -0
VPS33B-201ENST00000333371 KDRP35968 1356 aa15.03■□□□□ -0
VPS33B-201ENST00000333371 MARF1Q9Y4F3 1742 aaKnown RBP15.03■□□□□ -0
VPS33B-201ENST00000333371 SYCE3A1L190 88 aa15.03■□□□□ -0
VPS33B-201ENST00000333371 IL17REQ8NFR9 667 aa15.03■□□□□ -0
VPS33B-201ENST00000333371 ATP8B2P98198 1209 aa15.02■□□□□ -0
VPS33B-201ENST00000333371 DTNBO60941 627 aa15.02□□□□□ -0.01
VPS33B-201ENST00000333371 TPRNQ4KMQ1 711 aa15.02□□□□□ -0.01
VPS33B-201ENST00000333371 CCDC30Q5VVM6 783 aa15.02□□□□□ -0.01
VPS33B-201ENST00000333371 USP44Q9H0E7 712 aa15.02□□□□□ -0.01
VPS33B-201ENST00000333371 GDPD2Q9HCC8 539 aa15.02□□□□□ -0.01
VPS33B-201ENST00000333371 USP54Q70EL1 1684 aa15.01□□□□□ -0.01
VPS33B-201ENST00000333371 ZBTB7CA1YPR0 619 aa15.01□□□□□ -0.01
VPS33B-201ENST00000333371 GNAT3A8MTJ3 354 aa15.01□□□□□ -0.01
VPS33B-201ENST00000333371 ANP32BQ92688 251 aaKnown RBP15.01□□□□□ -0.01
VPS33B-201ENST00000333371 LARP6Q9BRS8 491 aaKnown RBP15.01□□□□□ -0.01
VPS33B-201ENST00000333371 GNAI3P08754 354 aa15□□□□□ -0.01
VPS33B-201ENST00000333371 RNF214Q8ND24 703 aa15□□□□□ -0.01
VPS33B-201ENST00000333371 LTN1O94822 1766 aa15□□□□□ -0.01
VPS33B-201ENST00000333371 EIF2S2P20042 333 aaKnown RBP14.99□□□□□ -0.01
VPS33B-201ENST00000333371 ZSCAN30Q86W11 494 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms