RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 NBPF7P0C2Y1 421 aaPredicted RBP11.18□□□□□ -0.62
COPB2-201ENST00000333188 MAP3K2Q9Y2U5 619 aa11.18□□□□□ -0.62
COPB2-201ENST00000333188 OVOS2A0A0J9YW53 1432 aa11.18□□□□□ -0.62
COPB2-201ENST00000333188 OVOS2Q6IE36 1432 aa11.18□□□□□ -0.62
COPB2-201ENST00000333188 NRXN3Q9Y4C0 1643 aa11.18□□□□□ -0.62
COPB2-201ENST00000333188 UBR1Q8IWV7 1749 aa11.18□□□□□ -0.62
COPB2-201ENST00000333188 FRAT2O75474 233 aaPredicted RBP11.18□□□□□ -0.62
COPB2-201ENST00000333188 PA2G4Q9UQ80 394 aaKnown RBP11.18□□□□□ -0.62
COPB2-201ENST00000333188 FER1L4A9Z1Z3 1794 aa11.17□□□□□ -0.62
COPB2-201ENST00000333188 RNMTO43148 476 aaKnown RBP11.17□□□□□ -0.62
COPB2-201ENST00000333188 NUCB1Q02818 461 aa11.17□□□□□ -0.62
COPB2-201ENST00000333188 HDAC1Q13547 482 aaPredicted RBP11.17□□□□□ -0.62
COPB2-201ENST00000333188 CDC42BPGQ6DT37 1551 aa11.17□□□□□ -0.62
COPB2-201ENST00000333188 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
COPB2-201ENST00000333188 NPHP3Q7Z494 1330 aa11.17□□□□□ -0.62
COPB2-201ENST00000333188 KLHDC4Q8TBB5 520 aa11.17□□□□□ -0.62
COPB2-201ENST00000333188 C3P01024 1663 aa11.17□□□□□ -0.62
COPB2-201ENST00000333188 KIAA0232Q92628 1395 aa11.17□□□□□ -0.62
COPB2-201ENST00000333188 DIP2AQ14689 1571 aa11.17□□□□□ -0.62
COPB2-201ENST00000333188 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
COPB2-201ENST00000333188 SHPRHQ149N8 1683 aa11.16□□□□□ -0.62
COPB2-201ENST00000333188 AKAP4Q5JQC9 854 aa11.16□□□□□ -0.62
COPB2-201ENST00000333188 HSCBQ8IWL3 235 aa11.16□□□□□ -0.62
COPB2-201ENST00000333188 GCC1Q96CN9 775 aa11.16□□□□□ -0.62
COPB2-201ENST00000333188 USP16Q9Y5T5 823 aa11.16□□□□□ -0.62
COPB2-201ENST00000333188 CEP170BQ9Y4F5 1589 aaPredicted RBP11.16□□□□□ -0.62
COPB2-201ENST00000333188 CCT4P50991 539 aaKnown RBP11.16□□□□□ -0.62
COPB2-201ENST00000333188 BRINP3Q76B58 766 aa11.16□□□□□ -0.62
COPB2-201ENST00000333188 PPP1R42Q7Z4L9 355 aa11.16□□□□□ -0.62
COPB2-201ENST00000333188 ZBTB3Q9H5J0 574 aa11.16□□□□□ -0.62
COPB2-201ENST00000333188 REREQ9P2R6 1566 aa11.15□□□□□ -0.62
COPB2-201ENST00000333188 EIF4A1P60842 406 aaKnown RBP11.15□□□□□ -0.62
COPB2-201ENST00000333188 LARP1Q6PKG0 1096 aaKnown RBP11.15□□□□□ -0.62
COPB2-201ENST00000333188 DNAAF4Q8WXU2 420 aa11.15□□□□□ -0.62
COPB2-201ENST00000333188 ARHGAP45Q92619 1136 aa11.15□□□□□ -0.62
COPB2-201ENST00000333188 ZNF496Q96IT1 587 aaPredicted RBP11.15□□□□□ -0.62
COPB2-201ENST00000333188 SPG7Q9UQ90 795 aa11.15□□□□□ -0.62
COPB2-201ENST00000333188 KDM4FA0A1W2PPD8 638 aa11.15□□□□□ -0.62
COPB2-201ENST00000333188 TBC1D9Q6ZT07 1266 aa11.15□□□□□ -0.62
COPB2-201ENST00000333188 COPS6Q7L5N1 327 aa11.15□□□□□ -0.62
COPB2-201ENST00000333188 MYD88Q99836 296 aa11.15□□□□□ -0.62
COPB2-201ENST00000333188 LARP6Q9BRS8 491 aaKnown RBP11.15□□□□□ -0.62
COPB2-201ENST00000333188 PIK3R4Q99570 1358 aa11.15□□□□□ -0.63
COPB2-201ENST00000333188 ANO2Q9NQ90 1003 aa11.14□□□□□ -0.63
COPB2-201ENST00000333188 RTN4Q9NQC3 1192 aaKnown RBP11.14□□□□□ -0.63
COPB2-201ENST00000333188 NFKBIBQ15653 356 aa11.14□□□□□ -0.63
COPB2-201ENST00000333188 AMOTQ4VCS5 1084 aa11.14□□□□□ -0.63
COPB2-201ENST00000333188 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
COPB2-201ENST00000333188 BTG4Q9NY30 223 aa11.14□□□□□ -0.63
COPB2-201ENST00000333188 ARHGEF10O15013 1369 aa11.14□□□□□ -0.63
COPB2-201ENST00000333188 GNAI3P08754 354 aa11.14□□□□□ -0.63
COPB2-201ENST00000333188 USP31Q70CQ4 1352 aa11.14□□□□□ -0.63
COPB2-201ENST00000333188 MED14O60244 1454 aa11.14□□□□□ -0.63
COPB2-201ENST00000333188 ABCC4O15439 1325 aa11.13□□□□□ -0.63
COPB2-201ENST00000333188 ERBB3P21860 1342 aa11.13□□□□□ -0.63
COPB2-201ENST00000333188 CASC1Q6TDU7 716 aa11.13□□□□□ -0.63
COPB2-201ENST00000333188 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
COPB2-201ENST00000333188 ANKRD44Q8N8A2 993 aa11.13□□□□□ -0.63
COPB2-201ENST00000333188 ACSBG1Q96GR2 724 aa11.13□□□□□ -0.63
COPB2-201ENST00000333188 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
COPB2-201ENST00000333188 IFNL2Q8IZJ0 200 aa11.13□□□□□ -0.63
COPB2-201ENST00000333188 LRRCC1Q9C099 1032 aa11.13□□□□□ -0.63
COPB2-201ENST00000333188 PTCH1Q13635 1447 aa11.12□□□□□ -0.63
COPB2-201ENST00000333188 ADGRL3Q9HAR2 1447 aa11.12□□□□□ -0.63
COPB2-201ENST00000333188 RGPD8O14715 1765 aaPredicted RBP11.12□□□□□ -0.63
COPB2-201ENST00000333188 A1BGP04217 495 aa11.12□□□□□ -0.63
COPB2-201ENST00000333188 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
COPB2-201ENST00000333188 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
COPB2-201ENST00000333188 RPAP2Q8IXW5 612 aaPredicted RBP11.12□□□□□ -0.63
COPB2-201ENST00000333188 USP44Q9H0E7 712 aa11.12□□□□□ -0.63
COPB2-201ENST00000333188 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
COPB2-201ENST00000333188 DBF4Q9UBU7 674 aaPredicted RBP11.12□□□□□ -0.63
COPB2-201ENST00000333188 PTPRCP08575 1304 aa11.12□□□□□ -0.63
COPB2-201ENST00000333188 KCNJ4P48050 445 aa11.12□□□□□ -0.63
COPB2-201ENST00000333188 ZNF790Q6PG37 636 aa11.12□□□□□ -0.63
COPB2-201ENST00000333188 PLEKHM2Q8IWE5 1019 aa11.12□□□□□ -0.63
COPB2-201ENST00000333188 AAMPQ13685 434 aa11.11□□□□□ -0.63
COPB2-201ENST00000333188 NDUFB9Q9Y6M9 179 aa11.11□□□□□ -0.63
COPB2-201ENST00000333188 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
COPB2-201ENST00000333188 SDSP20132 328 aa11.11□□□□□ -0.63
COPB2-201ENST00000333188 UBE3BQ7Z3V4 1068 aa11.11□□□□□ -0.63
COPB2-201ENST00000333188 ARHGAP23Q9P227 1491 aa11.11□□□□□ -0.63
COPB2-201ENST00000333188 CYP27B1O15528 508 aa11.11□□□□□ -0.63
COPB2-201ENST00000333188 DCTPP1Q9H773 170 aa11.11□□□□□ -0.63
COPB2-201ENST00000333188 GIGYF1O75420 1035 aaPredicted RBP11.1□□□□□ -0.63
COPB2-201ENST00000333188 GSPT1P15170 499 aaKnown RBP11.1□□□□□ -0.63
COPB2-201ENST00000333188 GPTP24298 496 aa11.1□□□□□ -0.63
COPB2-201ENST00000333188 ZCRB1Q8TBF4 217 aaKnown RBP11.1□□□□□ -0.63
COPB2-201ENST00000333188 CDC45O75419 566 aa11.1□□□□□ -0.63
COPB2-201ENST00000333188 KCNQ4P56696 695 aa11.1□□□□□ -0.63
COPB2-201ENST00000333188 FAM182BQ5T319 152 aa11.1□□□□□ -0.63
COPB2-201ENST00000333188 NEUROD6Q96NK8 337 aa11.1□□□□□ -0.63
COPB2-201ENST00000333188 DDX58O95786 925 aaKnown RBP11.1□□□□□ -0.63
COPB2-201ENST00000333188 TBC1D32Q96NH3 1257 aa11.09□□□□□ -0.63
COPB2-201ENST00000333188 UPF3BQ9BZI7 483 aaKnown RBP11.09□□□□□ -0.63
COPB2-201ENST00000333188 RTL1A6NKG5 1358 aa11.09□□□□□ -0.63
COPB2-201ENST00000333188 CRB1P82279 1406 aa11.09□□□□□ -0.63
COPB2-201ENST00000333188 C1orf167Q5SNV9 1468 aa11.09□□□□□ -0.63
COPB2-201ENST00000333188 SLIT1O75093 1534 aa11.09□□□□□ -0.63
COPB2-201ENST00000333188 IFIT2P09913 472 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms