RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 G2E3Q7L622 706 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 PIK3R4Q99570 1358 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 ATP5J2-PTCD1G3V325 749 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 TMX4Q9H1E5 349 aaPredicted RBP11.5□□□□□ -0.57
SS18L1-201ENST00000331758 NUCB1Q02818 461 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 CCDC57Q2TAC2 916 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 ZBTB3Q9H5J0 574 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 KIF3AQ9Y496 699 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 CNNM1Q9NRU3 951 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 ZNF521Q96K83 1311 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 PLEKHG1Q9ULL1 1385 aa11.5□□□□□ -0.57
SS18L1-201ENST00000331758 CHL1O00533 1208 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 G3V3G9 751 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 BMP2KLQ5H9B9 411 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 DCAF8Q5TAQ9 597 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 ANKRD44Q8N8A2 993 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 PLEKHF1Q96S99 279 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 ARID3AQ99856 593 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 MAP3K5Q99683 1374 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 A0A087WZG4 1122 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 NBPF6Q5VWK0 638 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 C16orf71Q8IYS4 520 aaPredicted RBP11.49□□□□□ -0.57
SS18L1-201ENST00000331758 NBPF4Q96M43 638 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 ATP6V1DQ9Y5K8 247 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 K7ELQ4 463 aaPredicted RBP11.49□□□□□ -0.57
SS18L1-201ENST00000331758 STARD3NLO95772 234 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 SKOR2Q2VWA4 1001 aaPredicted RBP11.49□□□□□ -0.57
SS18L1-201ENST00000331758 TBC1D9Q6ZT07 1266 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 CCDC8Q9H0W5 538 aaPredicted RBP11.49□□□□□ -0.57
SS18L1-201ENST00000331758 LGR6Q9HBX8 967 aa11.49□□□□□ -0.57
SS18L1-201ENST00000331758 A2ML1A8K2U0 1454 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 PHAXQ9H814 394 aaKnown RBP11.48□□□□□ -0.57
SS18L1-201ENST00000331758 CEP152O94986 1710 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 CEP126Q9P2H0 1117 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 ZBTB7BO15156 539 aaPredicted RBP11.48□□□□□ -0.57
SS18L1-201ENST00000331758 FOSBP53539 338 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 TRDNQ13061 729 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
SS18L1-201ENST00000331758 BOLA2Q9H3K6 86 aa11.48□□□□□ -0.57
SS18L1-201ENST00000331758 SF3A1Q15459 793 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 UBE3BQ7Z3V4 1068 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 TRMT2AQ8IZ69 625 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 MADDQ8WXG6 1647 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 RAB11FIP3O75154 756 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 SNRPA1P09661 255 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 MSNP26038 577 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 COPS6Q7L5N1 327 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 SMC5Q8IY18 1101 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 DRC7Q8IY82 874 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 ZCRB1Q8TBF4 217 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 TBC1D2Q9BYX2 928 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 EXOC5O00471 708 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 CPLX1O14810 134 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 GLRX3O76003 335 aaKnown RBP11.47□□□□□ -0.57
SS18L1-201ENST00000331758 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.571e-6■■■■□ 20.3
SS18L1-201ENST00000331758 XAGE3Q8WTP9 111 aa11.47□□□□□ -0.57
SS18L1-201ENST00000331758 HIP1O00291 1037 aa11.46□□□□□ -0.57
SS18L1-201ENST00000331758 CCDC158Q5M9N0 1113 aa11.46□□□□□ -0.57
SS18L1-201ENST00000331758 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
SS18L1-201ENST00000331758 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.58
SS18L1-201ENST00000331758 SEC24BO95487 1268 aa11.46□□□□□ -0.58
SS18L1-201ENST00000331758 RALYLQ86SE5 291 aaKnown RBP11.46□□□□□ -0.58
SS18L1-201ENST00000331758 TRAK2O60296 914 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 KDM2BQ8NHM5 1336 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 PSMA5P28066 241 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 CEP85Q6P2H3 762 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 TBC1D32Q96NH3 1257 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 RNMTO43148 476 aaKnown RBP11.45□□□□□ -0.58
SS18L1-201ENST00000331758 GPTP24298 496 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 MCM2P49736 904 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 TTC39AQ5SRH9 613 aa11.45□□□□□ -0.58
SS18L1-201ENST00000331758 PPRC1Q5VV67 1664 aaKnown RBP11.45□□□□□ -0.58
SS18L1-201ENST00000331758 CPLX2Q6PUV4 134 aaKnown RBP11.45□□□□□ -0.58
SS18L1-201ENST00000331758 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 ADGRB3O60242 1522 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 TULP1O00294 542 aaPredicted RBP11.44□□□□□ -0.58
SS18L1-201ENST00000331758 TTC22Q5TAA0 569 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 MPHOSPH8Q99549 860 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 CWF19L2Q2TBE0 894 aaKnown RBP11.44□□□□□ -0.58
SS18L1-201ENST00000331758 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
SS18L1-201ENST00000331758 KIDINS220Q9ULH0 1771 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 ABCA6Q8N139 1617 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 SDSP20132 328 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 SYNE3Q6ZMZ3 975 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 BICDL1Q6ZP65 573 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 RHPN1Q8TCX5 695 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 DCTPP1Q9H773 170 aa11.44□□□□□ -0.58
SS18L1-201ENST00000331758 NGLY1Q96IV0 654 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 ATP7BP35670 1465 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 CYP46A1Q9Y6A2 500 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 DIP2CQ9Y2E4 1556 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 IL17REQ8NFR9 667 aa11.43□□□□□ -0.58
SS18L1-201ENST00000331758 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms