RNA–Protein interactions for RNA: ENST00000326577.8

TNFRSF12A-201, Transcript of TNF receptor superfamily member 12A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF12A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-201ENST00000326577 KDRP35968 1356 aa32.7■■■□□ 2.83
TNFRSF12A-201ENST00000326577 ITPK1Q13572 414 aa32.7■■■□□ 2.83
TNFRSF12A-201ENST00000326577 PHF14O94880 888 aa32.69■■■□□ 2.82
TNFRSF12A-201ENST00000326577 CABP4P57796 275 aa32.69■■■□□ 2.82
TNFRSF12A-201ENST00000326577 AMIGO3Q86WK7 504 aa32.69■■■□□ 2.82
TNFRSF12A-201ENST00000326577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.68■■■□□ 2.82
TNFRSF12A-201ENST00000326577 KDM6AO15550 1401 aaPredicted RBP32.68■■■□□ 2.82
TNFRSF12A-201ENST00000326577 SSFA2P28290 1259 aa32.67■■■□□ 2.82
TNFRSF12A-201ENST00000326577 GPR162Q16538 588 aa32.67■■■□□ 2.82
TNFRSF12A-201ENST00000326577 SMIM5Q71RC9 77 aa32.67■■■□□ 2.82
TNFRSF12A-201ENST00000326577 RBM42Q9BTD8 480 aaKnown RBP32.66■■■□□ 2.82
TNFRSF12A-201ENST00000326577 UBR3Q6ZT12 1888 aa32.65■■■□□ 2.82
TNFRSF12A-201ENST00000326577 NLGN2Q8NFZ4 835 aa32.64■■■□□ 2.82
TNFRSF12A-201ENST00000326577 NPC1L1Q9UHC9 1359 aa32.64■■■□□ 2.82
TNFRSF12A-201ENST00000326577 GNPATO15228 680 aa32.63■■■□□ 2.81
TNFRSF12A-201ENST00000326577 DIAPH1O60610 1272 aaKnown RBP32.62■■■□□ 2.81
TNFRSF12A-201ENST00000326577 CNGB1Q14028 1251 aaPredicted RBP32.62■■■□□ 2.81
TNFRSF12A-201ENST00000326577 SLC4A9Q96Q91 983 aa32.62■■■□□ 2.81
TNFRSF12A-201ENST00000326577 HMOX1P09601 288 aa32.61■■■□□ 2.81
TNFRSF12A-201ENST00000326577 NFATC2IPQ8NCF5 419 aa32.61■■■□□ 2.81
TNFRSF12A-201ENST00000326577 AKAP4Q5JQC9 854 aa32.6■■■□□ 2.81
TNFRSF12A-201ENST00000326577 PELP1Q8IZL8 1130 aaKnown RBP32.59■■■□□ 2.81
TNFRSF12A-201ENST00000326577 CD2APQ9Y5K6 639 aa32.57■■■□□ 2.8
TNFRSF12A-201ENST00000326577 UTRNP46939 3433 aa32.56■■■□□ 2.8
TNFRSF12A-201ENST00000326577 RC3H1Q5TC82 1133 aaKnown RBP32.56■■■□□ 2.8
TNFRSF12A-201ENST00000326577 RTCBQ9Y3I0 505 aaKnown RBP32.55■■■□□ 2.8
TNFRSF12A-201ENST00000326577 ZNF831Q5JPB2 1677 aa32.55■■■□□ 2.8
TNFRSF12A-201ENST00000326577 CHD4Q14839 1912 aa32.55■■■□□ 2.8
TNFRSF12A-201ENST00000326577 PTCD1O75127 700 aaKnown RBP32.54■■■□□ 2.8
TNFRSF12A-201ENST00000326577 TRAPPC3LQ5T215 181 aa32.54■■■□□ 2.8
TNFRSF12A-201ENST00000326577 LGR6Q9HBX8 967 aa32.52■■■□□ 2.8
TNFRSF12A-201ENST00000326577 CNTNAP4Q9C0A0 1308 aa32.51■■■□□ 2.79
TNFRSF12A-201ENST00000326577 SCN11AQ9UI33 1791 aa32.5■■■□□ 2.79
TNFRSF12A-201ENST00000326577 MTHFSDQ2M296 383 aaKnown RBP32.5■■■□□ 2.79
TNFRSF12A-201ENST00000326577 RNMTO43148 476 aaKnown RBP32.49■■■□□ 2.79
TNFRSF12A-201ENST00000326577 RPS6KA4O75676 772 aa32.49■■■□□ 2.79
TNFRSF12A-201ENST00000326577 SLC52A2Q9HAB3 445 aa32.49■■■□□ 2.79
TNFRSF12A-201ENST00000326577 ADRA2BP18089 450 aa32.48■■■□□ 2.79
TNFRSF12A-201ENST00000326577 ZNF784Q8NCA9 323 aaPredicted RBP32.48■■■□□ 2.79
TNFRSF12A-201ENST00000326577 U2SURPO15042 1029 aaKnown RBP32.47■■■□□ 2.79
TNFRSF12A-201ENST00000326577 GRIN3BO60391 1043 aa32.47■■■□□ 2.79
TNFRSF12A-201ENST00000326577 ARHGEF1Q92888 912 aaKnown RBP32.47■■■□□ 2.79
TNFRSF12A-201ENST00000326577 YBX3P16989 372 aaKnown RBP eCLIP32.46■■■□□ 2.794e-6■□□□□ 11.2
TNFRSF12A-201ENST00000326577 COL3A1P02461 1466 aaPredicted RBP32.46■■■□□ 2.79
TNFRSF12A-201ENST00000326577 COL5A3P25940 1745 aaPredicted RBP32.46■■■□□ 2.79
TNFRSF12A-201ENST00000326577 NLGN1Q8N2Q7 840 aa32.44■■■□□ 2.78
TNFRSF12A-201ENST00000326577 RFC4P35249 363 aa32.43■■■□□ 2.78
TNFRSF12A-201ENST00000326577 CRKLP46109 303 aaKnown RBP32.43■■■□□ 2.78
TNFRSF12A-201ENST00000326577 MYH14Q7Z406 1995 aaKnown RBP32.42■■■□□ 2.78
TNFRSF12A-201ENST00000326577 MMP10P09238 476 aa32.42■■■□□ 2.78
TNFRSF12A-201ENST00000326577 CFAP53Q96M91 514 aa32.41■■■□□ 2.78
TNFRSF12A-201ENST00000326577 SLC39A6Q13433 755 aa32.39■■■□□ 2.78
TNFRSF12A-201ENST00000326577 MRC1P22897 1456 aa32.38■■■□□ 2.77
TNFRSF12A-201ENST00000326577 GYS1P13807 737 aa32.38■■■□□ 2.77
TNFRSF12A-201ENST00000326577 VIRMAQ69YN4 1812 aaKnown RBP32.36■■■□□ 2.77
TNFRSF12A-201ENST00000326577 DNAJC10Q8IXB1 793 aa32.36■■■□□ 2.77
TNFRSF12A-201ENST00000326577 GAS2L2Q8NHY3 880 aa32.36■■■□□ 2.77
TNFRSF12A-201ENST00000326577 GOLGB1Q14789 3259 aaKnown RBP32.36■■■□□ 2.77
TNFRSF12A-201ENST00000326577 TJP1Q07157 1748 aa32.35■■■□□ 2.77
TNFRSF12A-201ENST00000326577 INTS5Q6P9B9 1019 aaKnown RBP32.35■■■□□ 2.77
TNFRSF12A-201ENST00000326577 PPP2R1AP30153 589 aa32.34■■■□□ 2.77
TNFRSF12A-201ENST00000326577 NUDCQ9Y266 331 aa32.34■■■□□ 2.77
TNFRSF12A-201ENST00000326577 ADAMTS7Q9UKP4 1686 aa32.34■■■□□ 2.77
TNFRSF12A-201ENST00000326577 CICQ96RK0 1608 aaPredicted RBP32.33■■■□□ 2.77
TNFRSF12A-201ENST00000326577 GNAT3A8MTJ3 354 aa32.33■■■□□ 2.77
TNFRSF12A-201ENST00000326577 CCDC87Q9NVE4 849 aa32.32■■■□□ 2.76
TNFRSF12A-201ENST00000326577 PARP3Q9Y6F1 533 aa32.31■■■□□ 2.76
TNFRSF12A-201ENST00000326577 CYP19A1P11511 503 aaPredicted RBP32.3■■■□□ 2.76
TNFRSF12A-201ENST00000326577 IL17REQ8NFR9 667 aa32.3■■■□□ 2.76
TNFRSF12A-201ENST00000326577 SRP68Q9UHB9 627 aaKnown RBP32.3■■■□□ 2.76
TNFRSF12A-201ENST00000326577 PRKAR2BP31323 418 aa32.29■■■□□ 2.76
TNFRSF12A-201ENST00000326577 TEFQ10587 303 aa32.29■■■□□ 2.76
TNFRSF12A-201ENST00000326577 VSIG10Q8N0Z9 540 aa32.29■■■□□ 2.76
TNFRSF12A-201ENST00000326577 RSPH6AQ9H0K4 717 aa32.29■■■□□ 2.76
TNFRSF12A-201ENST00000326577 WWC3Q9ULE0 1092 aa32.29■■■□□ 2.76
TNFRSF12A-201ENST00000326577 C4AP0C0L4 1744 aa32.29■■■□□ 2.76
TNFRSF12A-201ENST00000326577 USP42Q9H9J4 1324 aaKnown RBP32.28■■■□□ 2.76
TNFRSF12A-201ENST00000326577 KCPQ6ZWJ8 1503 aa32.28■■■□□ 2.76
TNFRSF12A-201ENST00000326577 TTC5Q8N0Z6 440 aa32.28■■■□□ 2.76
TNFRSF12A-201ENST00000326577 PHACTR3Q96KR7 559 aa32.28■■■□□ 2.76
TNFRSF12A-201ENST00000326577 TGFB2P61812 414 aa32.27■■■□□ 2.76
TNFRSF12A-201ENST00000326577 U2AF1L5P0DN76 240 aaPredicted RBP32.25■■■□□ 2.75
TNFRSF12A-201ENST00000326577 U2AF1Q01081 240 aaKnown RBP eCLIP32.25■■■□□ 2.75
TNFRSF12A-201ENST00000326577 FKBP8Q14318 412 aa32.25■■■□□ 2.75
TNFRSF12A-201ENST00000326577 SOS1Q07889 1333 aaPredicted RBP32.25■■■□□ 2.75
TNFRSF12A-201ENST00000326577 ZPR1O75312 459 aa32.24■■■□□ 2.75
TNFRSF12A-201ENST00000326577 KIF13BQ9NQT8 1826 aa32.23■■■□□ 2.75
TNFRSF12A-201ENST00000326577 A0A0G2JLW4 131 aa32.22■■■□□ 2.75
TNFRSF12A-201ENST00000326577 C10orf71Q711Q0 1435 aa32.22■■■□□ 2.75
TNFRSF12A-201ENST00000326577 PXDNLA1KZ92 1463 aa32.22■■■□□ 2.75
TNFRSF12A-201ENST00000326577 FCHSD2O94868 740 aa32.21■■■□□ 2.75
TNFRSF12A-201ENST00000326577 ZNF790Q6PG37 636 aa32.21■■■□□ 2.75
TNFRSF12A-201ENST00000326577 ZBTB1Q9Y2K1 713 aa32.21■■■□□ 2.75
TNFRSF12A-201ENST00000326577 USPL1Q5W0Q7 1092 aa32.2■■■□□ 2.75
TNFRSF12A-201ENST00000326577 STARD3NLO95772 234 aa32.19■■■□□ 2.74
TNFRSF12A-201ENST00000326577 ZNF496Q96IT1 587 aaPredicted RBP32.19■■■□□ 2.74
TNFRSF12A-201ENST00000326577 UBR2Q8IWV8 1755 aa32.19■■■□□ 2.74
TNFRSF12A-201ENST00000326577 CEMIPQ8WUJ3 1361 aa32.19■■■□□ 2.74
TNFRSF12A-201ENST00000326577 TM4SF1P30408 202 aa32.18■■■□□ 2.74
TNFRSF12A-201ENST00000326577 NARFQ9UHQ1 456 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms