RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 PXDNQ92626 1479 aa24.27■■□□□ 1.48
CHMP6-201ENST00000325167 VIRMAQ69YN4 1812 aaKnown RBP24.26■■□□□ 1.47
CHMP6-201ENST00000325167 ERBB3P21860 1342 aa24.26■■□□□ 1.47
CHMP6-201ENST00000325167 C1orf141Q5JVX7 400 aa24.26■■□□□ 1.47
CHMP6-201ENST00000325167 ZNF530Q6P9A1 599 aaPredicted RBP24.26■■□□□ 1.47
CHMP6-201ENST00000325167 ZBTB47Q9UFB7 747 aaPredicted RBP24.26■■□□□ 1.47
CHMP6-201ENST00000325167 SPATA31A3Q5VYP0 1347 aa24.25■■□□□ 1.47
CHMP6-201ENST00000325167 NPM2Q86SE8 214 aaKnown RBP24.25■■□□□ 1.47
CHMP6-201ENST00000325167 ANP32EQ9BTT0 268 aa24.25■■□□□ 1.47
CHMP6-201ENST00000325167 CCT4P50991 539 aaKnown RBP24.24■■□□□ 1.47
CHMP6-201ENST00000325167 NUCB1Q02818 461 aa24.24■■□□□ 1.47
CHMP6-201ENST00000325167 SOS2Q07890 1332 aaPredicted RBP24.23■■□□□ 1.47
CHMP6-201ENST00000325167 CACNA1FO60840 1977 aa24.23■■□□□ 1.47
CHMP6-201ENST00000325167 CPDO75976 1380 aa24.22■■□□□ 1.47
CHMP6-201ENST00000325167 RGPD2P0DJD1 1756 aa24.22■■□□□ 1.47
CHMP6-201ENST00000325167 TEFQ10587 303 aa24.22■■□□□ 1.47
CHMP6-201ENST00000325167 FAM208AQ9UK61 1670 aaKnown RBP24.22■■□□□ 1.47
CHMP6-201ENST00000325167 RPAP2Q8IXW5 612 aaPredicted RBP24.21■■□□□ 1.47
CHMP6-201ENST00000325167 AXIN2Q9Y2T1 843 aa24.21■■□□□ 1.47
CHMP6-201ENST00000325167 ZC3H6P61129 1189 aaKnown RBP24.2■■□□□ 1.46
CHMP6-201ENST00000325167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.19■■□□□ 1.46
CHMP6-201ENST00000325167 CHD1LQ86WJ1 897 aa24.18■■□□□ 1.46
CHMP6-201ENST00000325167 RAPGEF4Q8WZA2 1011 aa24.18■■□□□ 1.46
CHMP6-201ENST00000325167 RNMTO43148 476 aaKnown RBP24.18■■□□□ 1.46
CHMP6-201ENST00000325167 ZNF772Q68DY9 489 aaPredicted RBP24.18■■□□□ 1.46
CHMP6-201ENST00000325167 UPF2Q9HAU5 1272 aaKnown RBP24.18■■□□□ 1.46
CHMP6-201ENST00000325167 KDM3BQ7LBC6 1761 aa24.17■■□□□ 1.46
CHMP6-201ENST00000325167 C8orf37Q96NL8 207 aa24.17■■□□□ 1.46
CHMP6-201ENST00000325167 PXDNLA1KZ92 1463 aa24.17■■□□□ 1.46
CHMP6-201ENST00000325167 AFF2P51816 1311 aa24.16■■□□□ 1.46
CHMP6-201ENST00000325167 COL18A1P39060 1754 aa24.16■■□□□ 1.46
CHMP6-201ENST00000325167 ADAMTS2O95450 1211 aa24.16■■□□□ 1.46
CHMP6-201ENST00000325167 FLIIQ13045 1269 aa24.16■■□□□ 1.46
CHMP6-201ENST00000325167 ANKRD44Q8N8A2 993 aa24.16■■□□□ 1.46
CHMP6-201ENST00000325167 CRYBG1Q9Y4K1 1723 aa24.15■■□□□ 1.46
CHMP6-201ENST00000325167 PLEKHG5O94827 1062 aa24.15■■□□□ 1.46
CHMP6-201ENST00000325167 TATP17735 454 aaPredicted RBP24.15■■□□□ 1.46
CHMP6-201ENST00000325167 EIF4A1P60842 406 aaKnown RBP24.15■■□□□ 1.46
CHMP6-201ENST00000325167 HDGFL1Q5TGJ6 251 aa24.15■■□□□ 1.46
CHMP6-201ENST00000325167 BTBD11A6QL63 1104 aa24.15■■□□□ 1.46
CHMP6-201ENST00000325167 LGR6Q9HBX8 967 aa24.15■■□□□ 1.46
CHMP6-201ENST00000325167 SPG7Q9UQ90 795 aa24.15■■□□□ 1.46
CHMP6-201ENST00000325167 C1orf115Q9H7X2 142 aa24.14■■□□□ 1.45
CHMP6-201ENST00000325167 ADAMTS7Q9UKP4 1686 aa24.13■■□□□ 1.45
CHMP6-201ENST00000325167 HMMRO75330 724 aa24.13■■□□□ 1.45
CHMP6-201ENST00000325167 NLRP2Q9NX02 1062 aa24.13■■□□□ 1.45
CHMP6-201ENST00000325167 RGPD5Q99666 1765 aa24.12■■□□□ 1.45
CHMP6-201ENST00000325167 FKBP5Q13451 457 aaPredicted RBP24.12■■□□□ 1.45
CHMP6-201ENST00000325167 G2E3Q7L622 706 aa24.12■■□□□ 1.45
CHMP6-201ENST00000325167 SIRT2Q8IXJ6 389 aa24.12■■□□□ 1.45
CHMP6-201ENST00000325167 DCTPP1Q9H773 170 aa24.12■■□□□ 1.45
CHMP6-201ENST00000325167 GNAI3P08754 354 aa24.11■■□□□ 1.45
CHMP6-201ENST00000325167 CSB-PGBD3P0DP91 1061 aa24.11■■□□□ 1.45
CHMP6-201ENST00000325167 ANKRD45Q5TZF3 282 aa24.11■■□□□ 1.45
CHMP6-201ENST00000325167 MPRIPQ6WCQ1 1025 aa24.11■■□□□ 1.45
CHMP6-201ENST00000325167 ATP10DQ9P241 1426 aa24.11■■□□□ 1.45
CHMP6-201ENST00000325167 COL22A1Q8NFW1 1626 aaPredicted RBP24.1■■□□□ 1.45
CHMP6-201ENST00000325167 MYT1Q01538 1121 aa24.09■■□□□ 1.45
CHMP6-201ENST00000325167 CEP85Q6P2H3 762 aa24.09■■□□□ 1.45
CHMP6-201ENST00000325167 LNPKQ9C0E8 428 aa24.09■■□□□ 1.45
CHMP6-201ENST00000325167 N4BP2Q86UW6 1770 aaPredicted RBP24.09■■□□□ 1.45
CHMP6-201ENST00000325167 EIF5BO60841 1220 aaKnown RBP24.08■■□□□ 1.45
CHMP6-201ENST00000325167 SLC4A10Q6U841 1118 aa24.08■■□□□ 1.45
CHMP6-201ENST00000325167 HSP90AB1P08238 724 aaKnown RBP24.08■■□□□ 1.44
CHMP6-201ENST00000325167 NGLY1Q96IV0 654 aa24.08■■□□□ 1.44
CHMP6-201ENST00000325167 MEIS3Q99687 375 aa24.08■■□□□ 1.44
CHMP6-201ENST00000325167 DAXXQ9UER7 740 aaPredicted RBP24.08■■□□□ 1.44
CHMP6-201ENST00000325167 GNAI2P04899 355 aa24.07■■□□□ 1.44
CHMP6-201ENST00000325167 BMP2KLQ5H9B9 411 aa24.07■■□□□ 1.44
CHMP6-201ENST00000325167 RXRBP28702 533 aa24.06■■□□□ 1.44
CHMP6-201ENST00000325167 IFNL2Q8IZJ0 200 aa24.06■■□□□ 1.44
CHMP6-201ENST00000325167 F6X3S4 739 aa24.05■■□□□ 1.44
CHMP6-201ENST00000325167 CABLES1Q8TDN4 633 aa24.05■■□□□ 1.44
CHMP6-201ENST00000325167 HEG1Q9ULI3 1381 aa24.05■■□□□ 1.44
CHMP6-201ENST00000325167 SIPA1L3O60292 1781 aaPredicted RBP24.05■■□□□ 1.44
CHMP6-201ENST00000325167 PHKG2P15735 406 aa24.04■■□□□ 1.44
CHMP6-201ENST00000325167 DBF4Q9UBU7 674 aaPredicted RBP24.04■■□□□ 1.44
CHMP6-201ENST00000325167 NECTIN2Q92692 538 aa24.02■■□□□ 1.44
CHMP6-201ENST00000325167 QTRT2Q9H974 415 aaKnown RBP24.02■■□□□ 1.44
CHMP6-201ENST00000325167 PRDM11Q9NQV5 511 aa24.02■■□□□ 1.44
CHMP6-201ENST00000325167 MEGF6O75095 1541 aa24.02■■□□□ 1.44
CHMP6-201ENST00000325167 EIF2S2P20042 333 aaKnown RBP24.02■■□□□ 1.44
CHMP6-201ENST00000325167 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
CHMP6-201ENST00000325167 DCAF5Q96JK2 942 aa24.02■■□□□ 1.44
CHMP6-201ENST00000325167 PKD1L3Q7Z443 1732 aa24.01■■□□□ 1.43
CHMP6-201ENST00000325167 GIGYF1O75420 1035 aaPredicted RBP24.01■■□□□ 1.43
CHMP6-201ENST00000325167 SLC52A2Q9HAB3 445 aa24.01■■□□□ 1.43
CHMP6-201ENST00000325167 WDR17Q8IZU2 1322 aa24■■□□□ 1.43
CHMP6-201ENST00000325167 SCN11AQ9UI33 1791 aa24■■□□□ 1.43
CHMP6-201ENST00000325167 TBC1D32Q96NH3 1257 aa23.99■■□□□ 1.43
CHMP6-201ENST00000325167 USP21Q9UK80 565 aa23.99■■□□□ 1.43
CHMP6-201ENST00000325167 MRC1P22897 1456 aa23.99■■□□□ 1.43
CHMP6-201ENST00000325167 KCNQ3O43525 872 aa23.99■■□□□ 1.43
CHMP6-201ENST00000325167 SRCIN1Q9C0H9 1055 aa23.99■■□□□ 1.43
CHMP6-201ENST00000325167 CHPF2Q9P2E5 772 aa23.99■■□□□ 1.43
CHMP6-201ENST00000325167 HDAC5Q9UQL6 1122 aa23.99■■□□□ 1.43
CHMP6-201ENST00000325167 SEC24BO95487 1268 aa23.98■■□□□ 1.43
CHMP6-201ENST00000325167 BECN1Q14457 450 aa23.98■■□□□ 1.43
CHMP6-201ENST00000325167 HYPKQ9NX55 129 aa23.98■■□□□ 1.43
CHMP6-201ENST00000325167 KDM6AO15550 1401 aaPredicted RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms