RNA–Protein interactions for RNA: ENST00000316626.5

GSK3B-202, Transcript of glycogen synthase kinase 3 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GSK3B, Length 1,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3B-202ENST00000316626 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
GSK3B-202ENST00000316626 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
GSK3B-202ENST00000316626 BRWD3Q6RI45 1802 aa13.42□□□□□ -0.26
GSK3B-202ENST00000316626 DUSP27Q5VZP5 1158 aa13.42□□□□□ -0.26
GSK3B-202ENST00000316626 SLC52A2Q9HAB3 445 aa13.42□□□□□ -0.26
GSK3B-202ENST00000316626 MBIPQ9NS73 344 aa13.42□□□□□ -0.26
GSK3B-202ENST00000316626 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
GSK3B-202ENST00000316626 ADAMTS7Q9UKP4 1686 aa13.41□□□□□ -0.26
GSK3B-202ENST00000316626 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
GSK3B-202ENST00000316626 BTBD11A6QL63 1104 aa13.41□□□□□ -0.26
GSK3B-202ENST00000316626 ACSBG1Q96GR2 724 aa13.41□□□□□ -0.26
GSK3B-202ENST00000316626 DOT1LQ8TEK3 1739 aa13.41□□□□□ -0.26
GSK3B-202ENST00000316626 ITGB4P16144 1822 aa13.4□□□□□ -0.26
GSK3B-202ENST00000316626 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
GSK3B-202ENST00000316626 ERVV-2B6SEH9 535 aa13.4□□□□□ -0.26
GSK3B-202ENST00000316626 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
GSK3B-202ENST00000316626 CHL1O00533 1208 aa13.39□□□□□ -0.27
GSK3B-202ENST00000316626 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
GSK3B-202ENST00000316626 TRMT2AQ8IZ69 625 aaKnown RBP13.39□□□□□ -0.27
GSK3B-202ENST00000316626 EXOSC9Q06265 439 aaKnown RBP13.39□□□□□ -0.27
GSK3B-202ENST00000316626 SLC39A6Q13433 755 aa13.39□□□□□ -0.27
GSK3B-202ENST00000316626 KRT27Q7Z3Y8 459 aa13.39□□□□□ -0.27
GSK3B-202ENST00000316626 ELL2O00472 640 aaPredicted RBP13.38□□□□□ -0.27
GSK3B-202ENST00000316626 PRIM1P49642 420 aaKnown RBP13.38□□□□□ -0.27
GSK3B-202ENST00000316626 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
GSK3B-202ENST00000316626 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
GSK3B-202ENST00000316626 MRC1P22897 1456 aa13.37□□□□□ -0.27
GSK3B-202ENST00000316626 KCNQ3O43525 872 aa13.36□□□□□ -0.27
GSK3B-202ENST00000316626 RGS12O14924 1447 aa13.36□□□□□ -0.27
GSK3B-202ENST00000316626 KCNQ2O43526 872 aa13.35□□□□□ -0.27
GSK3B-202ENST00000316626 KRT24Q2M2I5 525 aa13.35□□□□□ -0.27
GSK3B-202ENST00000316626 ZNF790Q6PG37 636 aa13.35□□□□□ -0.27
GSK3B-202ENST00000316626 PIGBQ92521 554 aa13.35□□□□□ -0.27
GSK3B-202ENST00000316626 BABAM1Q9NWV8 329 aa13.35□□□□□ -0.27
GSK3B-202ENST00000316626 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
GSK3B-202ENST00000316626 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
GSK3B-202ENST00000316626 TSPYL6Q8N831 410 aa13.34□□□□□ -0.27
GSK3B-202ENST00000316626 BCL9O00512 1426 aa13.33□□□□□ -0.28
GSK3B-202ENST00000316626 SBF2Q86WG5 1849 aa13.33□□□□□ -0.28
GSK3B-202ENST00000316626 PTCD1O75127 700 aaKnown RBP13.33□□□□□ -0.28
GSK3B-202ENST00000316626 FAM196AQ6ZSG2 479 aa13.33□□□□□ -0.28
GSK3B-202ENST00000316626 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
GSK3B-202ENST00000316626 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
GSK3B-202ENST00000316626 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
GSK3B-202ENST00000316626 PTF1AQ7RTS3 328 aa13.31□□□□□ -0.28
GSK3B-202ENST00000316626 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
GSK3B-202ENST00000316626 ZNF496Q96IT1 587 aaPredicted RBP13.31□□□□□ -0.28
GSK3B-202ENST00000316626 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
GSK3B-202ENST00000316626 ATG3Q9NT62 314 aa13.31□□□□□ -0.28
GSK3B-202ENST00000316626 NHSQ6T4R5 1651 aa13.31□□□□□ -0.28
GSK3B-202ENST00000316626 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
GSK3B-202ENST00000316626 TCERG1O14776 1098 aaKnown RBP13.31□□□□□ -0.28
GSK3B-202ENST00000316626 FMNL2Q96PY5 1086 aa13.31□□□□□ -0.28
GSK3B-202ENST00000316626 BTAF1O14981 1849 aa13.3□□□□□ -0.28
GSK3B-202ENST00000316626 VAMP4O75379 141 aa13.3□□□□□ -0.28
GSK3B-202ENST00000316626 TRIM37O94972 964 aa13.3□□□□□ -0.28
GSK3B-202ENST00000316626 EIF2S2P20042 333 aaKnown RBP13.3□□□□□ -0.28
GSK3B-202ENST00000316626 BCL2L13Q9BXK5 485 aa13.3□□□□□ -0.28
GSK3B-202ENST00000316626 UBR2Q8IWV8 1755 aa13.3□□□□□ -0.28
GSK3B-202ENST00000316626 PRAMEF22A3QJZ6 481 aa13.29□□□□□ -0.28
GSK3B-202ENST00000316626 CT47B1P0C2W7 299 aaPredicted RBP13.29□□□□□ -0.28
GSK3B-202ENST00000316626 EP400Q96L91 3159 aa13.29□□□□□ -0.28
GSK3B-202ENST00000316626 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
GSK3B-202ENST00000316626 SUPT16HQ9Y5B9 1047 aaKnown RBP13.28□□□□□ -0.28
GSK3B-202ENST00000316626 C5P01031 1676 aa13.28□□□□□ -0.28
GSK3B-202ENST00000316626 KCPQ6ZWJ8 1503 aa13.28□□□□□ -0.28
GSK3B-202ENST00000316626 BCAR3O75815 825 aa13.28□□□□□ -0.28
GSK3B-202ENST00000316626 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
GSK3B-202ENST00000316626 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
GSK3B-202ENST00000316626 BCL11BQ9C0K0 894 aaPredicted RBP13.28□□□□□ -0.28
GSK3B-202ENST00000316626 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
GSK3B-202ENST00000316626 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
GSK3B-202ENST00000316626 HEG1Q9ULI3 1381 aa13.27□□□□□ -0.29
GSK3B-202ENST00000316626 RARSP54136 660 aaKnown RBP13.27□□□□□ -0.29
GSK3B-202ENST00000316626 SSH1Q8WYL5 1049 aa13.27□□□□□ -0.29
GSK3B-202ENST00000316626 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.29
GSK3B-202ENST00000316626 CCDC30Q5VVM6 783 aa13.26□□□□□ -0.29
GSK3B-202ENST00000316626 CANXP27824 592 aaKnown RBP13.25□□□□□ -0.29
GSK3B-202ENST00000316626 ATP6V1AP38606 617 aa13.25□□□□□ -0.29
GSK3B-202ENST00000316626 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
GSK3B-202ENST00000316626 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
GSK3B-202ENST00000316626 STK31Q9BXU1 1019 aa13.25□□□□□ -0.29
GSK3B-202ENST00000316626 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
GSK3B-202ENST00000316626 HOXB7P09629 217 aa13.24□□□□□ -0.29
GSK3B-202ENST00000316626 SOS1Q07889 1333 aaPredicted RBP13.24□□□□□ -0.29
GSK3B-202ENST00000316626 LAMB4A4D0S4 1761 aa13.24□□□□□ -0.29
GSK3B-202ENST00000316626 LOC102724428A0A0B4J2F2 783 aa13.24□□□□□ -0.29
GSK3B-202ENST00000316626 PLIN1O60240 522 aa13.24□□□□□ -0.29
GSK3B-202ENST00000316626 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
GSK3B-202ENST00000316626 SIK1P57059 783 aa13.24□□□□□ -0.29
GSK3B-202ENST00000316626 ALDH1L2Q3SY69 923 aa13.24□□□□□ -0.29
GSK3B-202ENST00000316626 DNAJC10Q8IXB1 793 aa13.24□□□□□ -0.29
GSK3B-202ENST00000316626 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
GSK3B-202ENST00000316626 APBA3O96018 575 aa13.23□□□□□ -0.29
GSK3B-202ENST00000316626 PIP4K2AP48426 406 aaPredicted RBP13.23□□□□□ -0.29
GSK3B-202ENST00000316626 KCNQ4P56696 695 aa13.23□□□□□ -0.29
GSK3B-202ENST00000316626 PPP4R3CPQ6ZMV5 832 aa13.23□□□□□ -0.29
GSK3B-202ENST00000316626 SLC4A9Q96Q91 983 aa13.23□□□□□ -0.29
GSK3B-202ENST00000316626 CHPF2Q9P2E5 772 aa13.23□□□□□ -0.29
GSK3B-202ENST00000316626 ANXA1P04083 346 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms