RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TSPYL4Q9UJ04 414 aa21.32■■□□□ 1
SCAMP4-201ENST00000316097 RBM25P49756 843 aaKnown RBP21.32■■□□□ 1
SCAMP4-201ENST00000316097 MED1Q15648 1581 aaPredicted RBP21.31■■□□□ 1
SCAMP4-201ENST00000316097 SNX21Q969T3 373 aa21.31■■□□□ 1
SCAMP4-201ENST00000316097 PKNOX2Q96KN3 472 aa21.31■■□□□ 1
SCAMP4-201ENST00000316097 LGR6Q9HBX8 967 aa21.31■■□□□ 1
SCAMP4-201ENST00000316097 KIF1AQ12756 1690 aa21.31■■□□□ 1
SCAMP4-201ENST00000316097 SLIT3O75094 1523 aa21.31■■□□□ 1
SCAMP4-201ENST00000316097 GBP4Q96PP9 640 aa21.31■■□□□ 1
SCAMP4-201ENST00000316097 RGPD2P0DJD1 1756 aa21.3■■□□□ 1
SCAMP4-201ENST00000316097 KIF16BQ96L93 1317 aa21.3■■□□□ 1
SCAMP4-201ENST00000316097 LNPKQ9C0E8 428 aa21.29■■□□□ 1
SCAMP4-201ENST00000316097 SPATA31A3Q5VYP0 1347 aa21.29■■□□□ 1
SCAMP4-201ENST00000316097 IPO8O15397 1037 aaKnown RBP21.29■■□□□ 1
SCAMP4-201ENST00000316097 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
SCAMP4-201ENST00000316097 CIZ1Q9ULV3 898 aaPredicted RBP21.28■■□□□ 1
SCAMP4-201ENST00000316097 NECTIN2Q92692 538 aa21.28■■□□□ 1
SCAMP4-201ENST00000316097 RAB3GAP1Q15042 981 aa21.27■■□□□ 1
SCAMP4-201ENST00000316097 NLRP2Q9NX02 1062 aa21.27■■□□□ 1
SCAMP4-201ENST00000316097 MAP3K5Q99683 1374 aa21.27■■□□□ 1
SCAMP4-201ENST00000316097 MPRIPQ6WCQ1 1025 aa21.27■■□□□ 1
SCAMP4-201ENST00000316097 PXDNQ92626 1479 aa21.26■□□□□ 0.99
SCAMP4-201ENST00000316097 NUCB1Q02818 461 aa21.26■□□□□ 0.99
SCAMP4-201ENST00000316097 ZNF428Q96B54 188 aa21.26■□□□□ 0.99
SCAMP4-201ENST00000316097 ZBTB40Q9NUA8 1239 aa21.26■□□□□ 0.99
SCAMP4-201ENST00000316097 ALS2Q96Q42 1657 aa21.26■□□□□ 0.99
SCAMP4-201ENST00000316097 ERBB3P21860 1342 aa21.25■□□□□ 0.99
SCAMP4-201ENST00000316097 ZNF530Q6P9A1 599 aaPredicted RBP21.25■□□□□ 0.99
SCAMP4-201ENST00000316097 TNS3Q68CZ2 1445 aa21.25■□□□□ 0.99
SCAMP4-201ENST00000316097 SKOR2Q2VWA4 1001 aaPredicted RBP21.25■□□□□ 0.99
SCAMP4-201ENST00000316097 CSB-PGBD3P0DP91 1061 aa21.24■□□□□ 0.99
SCAMP4-201ENST00000316097 ZMYND15Q9H091 742 aa21.24■□□□□ 0.99
SCAMP4-201ENST00000316097 KIAA0232Q92628 1395 aa21.23■□□□□ 0.99
SCAMP4-201ENST00000316097 CD2BP2O95400 341 aaKnown RBP21.23■□□□□ 0.99
SCAMP4-201ENST00000316097 CHD1LQ86WJ1 897 aa21.23■□□□□ 0.99
SCAMP4-201ENST00000316097 HTATSF1O43719 755 aaKnown RBP21.22■□□□□ 0.99
SCAMP4-201ENST00000316097 BRPF1P55201 1214 aaPredicted RBP21.22■□□□□ 0.99
SCAMP4-201ENST00000316097 RGPD5Q99666 1765 aa21.22■□□□□ 0.99
SCAMP4-201ENST00000316097 SLC4A2P04920 1241 aa21.22■□□□□ 0.99
SCAMP4-201ENST00000316097 KIF2CQ99661 725 aa21.22■□□□□ 0.99
SCAMP4-201ENST00000316097 C1orf115Q9H7X2 142 aa21.22■□□□□ 0.99
SCAMP4-201ENST00000316097 TAF7Q15545 349 aaPredicted RBP21.22■□□□□ 0.99
SCAMP4-201ENST00000316097 PLEKHO1Q53GL0 409 aaPredicted RBP21.21■□□□□ 0.99
SCAMP4-201ENST00000316097 KCNQ3O43525 872 aa21.21■□□□□ 0.99
SCAMP4-201ENST00000316097 PTMSP20962 102 aa21.2■□□□□ 0.98
SCAMP4-201ENST00000316097 G2E3Q7L622 706 aa21.2■□□□□ 0.98
SCAMP4-201ENST00000316097 HAP1P54257 671 aaPredicted RBP21.19■□□□□ 0.98
SCAMP4-201ENST00000316097 BMP2KLQ5H9B9 411 aa21.19■□□□□ 0.98
SCAMP4-201ENST00000316097 K7ELQ4 463 aaPredicted RBP21.18■□□□□ 0.98
SCAMP4-201ENST00000316097 SSFA2P28290 1259 aa21.18■□□□□ 0.98
SCAMP4-201ENST00000316097 ARHGAP45Q92619 1136 aa21.18■□□□□ 0.98
SCAMP4-201ENST00000316097 RBM42Q9BTD8 480 aaKnown RBP21.18■□□□□ 0.98
SCAMP4-201ENST00000316097 SOS2Q07890 1332 aaPredicted RBP21.18■□□□□ 0.98
SCAMP4-201ENST00000316097 PHRF1Q9P1Y6 1649 aaKnown RBP21.17■□□□□ 0.98
SCAMP4-201ENST00000316097 ZBTB7BO15156 539 aaPredicted RBP21.17■□□□□ 0.98
SCAMP4-201ENST00000316097 TPM2P07951 284 aa21.17■□□□□ 0.98
SCAMP4-201ENST00000316097 NASPP49321 788 aaPredicted RBP21.17■□□□□ 0.98
SCAMP4-201ENST00000316097 CCDC173Q0VFZ6 552 aa21.17■□□□□ 0.98
SCAMP4-201ENST00000316097 AKAP4Q5JQC9 854 aa21.17■□□□□ 0.98
SCAMP4-201ENST00000316097 C1orf141Q5JVX7 400 aa21.17■□□□□ 0.98
SCAMP4-201ENST00000316097 ANKRD45Q5TZF3 282 aa21.17■□□□□ 0.98
SCAMP4-201ENST00000316097 PRDM11Q9NQV5 511 aa21.16■□□□□ 0.98
SCAMP4-201ENST00000316097 F6X3S4 739 aa21.15■□□□□ 0.98
SCAMP4-201ENST00000316097 GOLGA6L22H0YM25 854 aa21.15■□□□□ 0.98
SCAMP4-201ENST00000316097 ABCC4O15439 1325 aa21.15■□□□□ 0.98
SCAMP4-201ENST00000316097 AMOTQ4VCS5 1084 aa21.15■□□□□ 0.98
SCAMP4-201ENST00000316097 RAPGEF4Q8WZA2 1011 aa21.15■□□□□ 0.98
SCAMP4-201ENST00000316097 CEMIPQ8WUJ3 1361 aa21.14■□□□□ 0.98
SCAMP4-201ENST00000316097 TEFQ10587 303 aa21.14■□□□□ 0.98
SCAMP4-201ENST00000316097 TBC1D9Q6ZT07 1266 aa21.14■□□□□ 0.98
SCAMP4-201ENST00000316097 KIAA1211Q6ZU35 1233 aa21.14■□□□□ 0.98
SCAMP4-201ENST00000316097 RNMTO43148 476 aaKnown RBP21.14■□□□□ 0.97
SCAMP4-201ENST00000316097 API5Q9BZZ5 524 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-201ENST00000316097 DDX49Q9Y6V7 483 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-201ENST00000316097 BTBD11A6QL63 1104 aa21.13■□□□□ 0.97
SCAMP4-201ENST00000316097 EIF2S2P20042 333 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-201ENST00000316097 ANP32BQ92688 251 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-201ENST00000316097 PPP1R9BQ96SB3 815 aa21.13■□□□□ 0.97
SCAMP4-201ENST00000316097 SLC4A10Q6U841 1118 aa21.12■□□□□ 0.97
SCAMP4-201ENST00000316097 ZSCAN30Q86W11 494 aa21.12■□□□□ 0.97
SCAMP4-201ENST00000316097 NCAPD2Q15021 1401 aa21.11■□□□□ 0.97
SCAMP4-201ENST00000316097 KLHL40Q2TBA0 621 aa21.11■□□□□ 0.97
SCAMP4-201ENST00000316097 STRN4Q9NRL3 753 aa21.11■□□□□ 0.97
SCAMP4-201ENST00000316097 BAG4O95429 457 aaKnown RBP21.1■□□□□ 0.97
SCAMP4-201ENST00000316097 TATP17735 454 aaPredicted RBP21.1■□□□□ 0.97
SCAMP4-201ENST00000316097 EIF4A1P60842 406 aaKnown RBP21.1■□□□□ 0.97
SCAMP4-201ENST00000316097 RGS12O14924 1447 aa21.09■□□□□ 0.97
SCAMP4-201ENST00000316097 GCC1Q96CN9 775 aa21.09■□□□□ 0.97
SCAMP4-201ENST00000316097 MEGF6O75095 1541 aa21.09■□□□□ 0.97
SCAMP4-201ENST00000316097 LRRC37A3O60309 1634 aa21.09■□□□□ 0.97
SCAMP4-201ENST00000316097 PRAMEF22A3QJZ6 481 aa21.09■□□□□ 0.97
SCAMP4-201ENST00000316097 MSNP26038 577 aaKnown RBP21.09■□□□□ 0.97
SCAMP4-201ENST00000316097 STK31Q9BXU1 1019 aa21.09■□□□□ 0.97
SCAMP4-201ENST00000316097 COL18A1P39060 1754 aa21.08■□□□□ 0.97
SCAMP4-201ENST00000316097 ANXA1P04083 346 aa21.08■□□□□ 0.97
SCAMP4-201ENST00000316097 TOM1L2Q6ZVM7 507 aa21.08■□□□□ 0.97
SCAMP4-201ENST00000316097 PHAXQ9H814 394 aaKnown RBP21.08■□□□□ 0.96
SCAMP4-201ENST00000316097 SLC39A6Q13433 755 aa21.07■□□□□ 0.96
SCAMP4-201ENST00000316097 HDGFL1Q5TGJ6 251 aa21.07■□□□□ 0.96
SCAMP4-201ENST00000316097 CCDC30Q5VVM6 783 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms