RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 AHDC1Q5TGY3 1603 aaPredicted RBP14.27□□□□□ -0.12
LDLRAD3-201ENST00000315571 DIAPH1O60610 1272 aaKnown RBP14.27□□□□□ -0.13
LDLRAD3-201ENST00000315571 ANTXR1Q9H6X2 564 aa14.27□□□□□ -0.13
LDLRAD3-201ENST00000315571 U2SURPO15042 1029 aaKnown RBP14.26□□□□□ -0.13
LDLRAD3-201ENST00000315571 MCTP1Q6DN14 999 aa14.26□□□□□ -0.13
LDLRAD3-201ENST00000315571 NOL7Q9UMY1 257 aaKnown RBP14.26□□□□□ -0.13
LDLRAD3-201ENST00000315571 ALS2Q96Q42 1657 aa14.26□□□□□ -0.13
LDLRAD3-201ENST00000315571 IRX5P78411 483 aaPredicted RBP14.26□□□□□ -0.13
LDLRAD3-201ENST00000315571 ATP2B3Q16720 1220 aa14.26□□□□□ -0.13
LDLRAD3-201ENST00000315571 FLT4P35916 1363 aa14.25□□□□□ -0.13
LDLRAD3-201ENST00000315571 CNPY4Q8N129 248 aa14.25□□□□□ -0.13
LDLRAD3-201ENST00000315571 COG6Q9Y2V7 657 aa14.25□□□□□ -0.13
LDLRAD3-201ENST00000315571 CDK12Q9NYV4 1490 aaPredicted RBP14.24□□□□□ -0.13
LDLRAD3-201ENST00000315571 U2AF1L5P0DN76 240 aaPredicted RBP14.24□□□□□ -0.13
LDLRAD3-201ENST00000315571 U2AF1Q01081 240 aaKnown RBP eCLIP14.24□□□□□ -0.13
LDLRAD3-201ENST00000315571 SLIT3O75094 1523 aa14.24□□□□□ -0.13
LDLRAD3-201ENST00000315571 HSP90AB2PQ58FF8 381 aa14.24□□□□□ -0.13
LDLRAD3-201ENST00000315571 ARHGEF25Q86VW2 580 aa14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 USP54Q70EL1 1684 aa14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 PHLPP1O60346 1717 aa14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 HOXC9P31274 260 aa14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 PRDM11Q9NQV5 511 aa14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 PNPLA6Q8IY17 1366 aa14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 FOXD4L5Q5VV16 416 aaPredicted RBP14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 FOXD4L4Q8WXT5 416 aaPredicted RBP14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 ADAMTS8Q9UP79 889 aa14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 MED1Q15648 1581 aaPredicted RBP14.23□□□□□ -0.13
LDLRAD3-201ENST00000315571 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
LDLRAD3-201ENST00000315571 NFAT5O94916 1531 aa14.22□□□□□ -0.13
LDLRAD3-201ENST00000315571 RTL1A6NKG5 1358 aa14.22□□□□□ -0.13
LDLRAD3-201ENST00000315571 IP6K1Q92551 441 aa14.22□□□□□ -0.13
LDLRAD3-201ENST00000315571 PPP1R9BQ96SB3 815 aa14.22□□□□□ -0.13
LDLRAD3-201ENST00000315571 TMX1Q9H3N1 280 aa14.22□□□□□ -0.13
LDLRAD3-201ENST00000315571 GPATCH11Q8N954 259 aa14.22□□□□□ -0.13
LDLRAD3-201ENST00000315571 TBC1D32Q96NH3 1257 aa14.22□□□□□ -0.13
LDLRAD3-201ENST00000315571 RGS22Q8NE09 1264 aa14.21□□□□□ -0.13
LDLRAD3-201ENST00000315571 CALCOCO1Q9P1Z2 691 aa14.21□□□□□ -0.13
LDLRAD3-201ENST00000315571 INSRP06213 1382 aa14.21□□□□□ -0.13
LDLRAD3-201ENST00000315571 MAP2P11137 1827 aaKnown RBP14.21□□□□□ -0.13
LDLRAD3-201ENST00000315571 CHRNA2Q15822 529 aa14.21□□□□□ -0.13
LDLRAD3-201ENST00000315571 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.14
LDLRAD3-201ENST00000315571 KIAA0232Q92628 1395 aa14.21□□□□□ -0.14
LDLRAD3-201ENST00000315571 EIF4A2Q14240 407 aaKnown RBP14.21□□□□□ -0.14
LDLRAD3-201ENST00000315571 MYRIPQ8NFW9 859 aa14.21□□□□□ -0.14
LDLRAD3-201ENST00000315571 KDM2BQ8NHM5 1336 aa14.2□□□□□ -0.14
LDLRAD3-201ENST00000315571 ZNF500O60304 480 aaPredicted RBP14.2□□□□□ -0.14
LDLRAD3-201ENST00000315571 NUTM2BA6NNL0 878 aaPredicted RBP14.2□□□□□ -0.14
LDLRAD3-201ENST00000315571 NUTM2EB1AL46 878 aaPredicted RBP14.2□□□□□ -0.14
LDLRAD3-201ENST00000315571 NUTM2AQ8IVF1 878 aaPredicted RBP14.2□□□□□ -0.14
LDLRAD3-201ENST00000315571 DIAPH3Q9NSV4 1193 aa14.2□□□□□ -0.14
LDLRAD3-201ENST00000315571 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
LDLRAD3-201ENST00000315571 COL16A1Q07092 1604 aaPredicted RBP14.19□□□□□ -0.14
LDLRAD3-201ENST00000315571 IL13P35225 146 aa14.19□□□□□ -0.14
LDLRAD3-201ENST00000315571 COL3A1P02461 1466 aaPredicted RBP14.19□□□□□ -0.14
LDLRAD3-201ENST00000315571 HSPA1LP34931 641 aa14.19□□□□□ -0.14
LDLRAD3-201ENST00000315571 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
LDLRAD3-201ENST00000315571 JCADQ9P266 1359 aa14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 IGHDP01880 384 aa14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 CLUAP1Q96AJ1 413 aa14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 CLGNO14967 610 aa14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 CCDC146Q8IYE0 955 aa14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 PRIMPOLQ96LW4 560 aa14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 CPDO75976 1380 aa14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 CSB-PGBD3P0DP91 1061 aa14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 HS1BP3Q53T59 392 aa14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 PHRF1Q9P1Y6 1649 aaKnown RBP14.18□□□□□ -0.14
LDLRAD3-201ENST00000315571 ADAMTS2O95450 1211 aa14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 TNNT1P13805 278 aa14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 FAM193AP78312 1265 aa14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 TOMM22Q9NS69 142 aa14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 HMOX1P09601 288 aa14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 MCM5P33992 734 aa14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 PEAK1Q9H792 1746 aa14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 GOLGA6L6A8MZA4 724 aa14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 ANKRD24Q8TF21 1146 aa14.17□□□□□ -0.14
LDLRAD3-201ENST00000315571 GTF2A1P52655 376 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-201ENST00000315571 PRPF40AO75400 957 aaKnown RBP14.16□□□□□ -0.14
LDLRAD3-201ENST00000315571 PANK1Q8TE04 598 aa14.16□□□□□ -0.14
LDLRAD3-201ENST00000315571 BLMP54132 1417 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD3-201ENST00000315571 SSFA2P28290 1259 aa14.16□□□□□ -0.14
LDLRAD3-201ENST00000315571 BCL2L12Q9HB09 334 aa14.16□□□□□ -0.14
LDLRAD3-201ENST00000315571 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
LDLRAD3-201ENST00000315571 SULT6B1Q6IMI4 303 aa14.15□□□□□ -0.14
LDLRAD3-201ENST00000315571 TSPYL1Q9H0U9 437 aa14.15□□□□□ -0.14
LDLRAD3-201ENST00000315571 LTN1O94822 1766 aa14.15□□□□□ -0.14
LDLRAD3-201ENST00000315571 BCAR3O75815 825 aa14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 C17orf53Q8N3J3 647 aaPredicted RBP14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 ZNF592Q92610 1267 aa14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 SYCE3A1L190 88 aa14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 PRIM1P49642 420 aaKnown RBP14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 FOXD4L6Q3SYB3 417 aaPredicted RBP14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 FOXD4L3Q6VB84 417 aaPredicted RBP14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 RBSNQ9H1K0 784 aa14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 FCHSD2O94868 740 aa14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 EVA1CP58658 441 aa14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 RUNDC1Q96C34 613 aa14.14□□□□□ -0.15
LDLRAD3-201ENST00000315571 EYA1Q99502 592 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms