RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 IFIT5Q13325 482 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-201ENST00000314845 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
AMBRA1-201ENST00000314845 BRPF1P55201 1214 aaPredicted RBP14.11□□□□□ -0.15
AMBRA1-201ENST00000314845 HSP90AB2PQ58FF8 381 aa14.11□□□□□ -0.15
AMBRA1-201ENST00000314845 LUC7LQ9NQ29 371 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-201ENST00000314845 EXOC5O00471 708 aa14.11□□□□□ -0.15
AMBRA1-201ENST00000314845 KRT28Q7Z3Y7 464 aa14.11□□□□□ -0.15
AMBRA1-201ENST00000314845 NOS1P29475 1434 aa14.1□□□□□ -0.15
AMBRA1-201ENST00000314845 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
AMBRA1-201ENST00000314845 MYO6Q9UM54 1294 aa14.1□□□□□ -0.15
AMBRA1-201ENST00000314845 ADAMTS2O95450 1211 aa14.1□□□□□ -0.15
AMBRA1-201ENST00000314845 TEX13AQ9BXU3 409 aaPredicted RBP14.1□□□□□ -0.15
AMBRA1-201ENST00000314845 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■■■■■ 114.3
AMBRA1-201ENST00000314845 SERPINC1P01008 464 aa14.1□□□□□ -0.15
AMBRA1-201ENST00000314845 VSIG10Q8N0Z9 540 aa14.09□□□□□ -0.15
AMBRA1-201ENST00000314845 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
AMBRA1-201ENST00000314845 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
AMBRA1-201ENST00000314845 ZHX3Q9H4I2 956 aa14.09□□□□□ -0.15
AMBRA1-201ENST00000314845 IFNL2Q8IZJ0 200 aa14.09□□□□□ -0.15
AMBRA1-201ENST00000314845 TRMT112Q9UI30 125 aaKnown RBP14.09□□□□□ -0.15
AMBRA1-201ENST00000314845 ERCC4Q92889 916 aaPredicted RBP14.08□□□□□ -0.15
AMBRA1-201ENST00000314845 TTLL5Q6EMB2 1281 aa14.08□□□□□ -0.16
AMBRA1-201ENST00000314845 PTPRCP08575 1304 aa14.08□□□□□ -0.16
AMBRA1-201ENST00000314845 MAP3K12Q12852 859 aa14.08□□□□□ -0.16
AMBRA1-201ENST00000314845 PPFIBP1Q86W92 1011 aa14.08□□□□□ -0.16
AMBRA1-201ENST00000314845 PDCL3Q9H2J4 239 aa14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 NKTRP30414 1462 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 CCDC196A0A1B0GTZ2 297 aa14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 C11orf95C9JLR9 678 aaPredicted RBP14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 CASTP20810 708 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 BOLA2Q9H3K6 86 aa14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 RPRD2Q5VT52 1461 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 A0A087WZG4 1122 aa14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 ZNF771Q7L3S4 317 aaPredicted RBP14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 TXLNBQ8N3L3 684 aa14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 NAPBQ9H115 298 aa14.07□□□□□ -0.16
AMBRA1-201ENST00000314845 USP5P45974 858 aa14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 FLIIQ13045 1269 aa14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 URB2Q14146 1524 aaKnown RBP14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 ANKRD18BA2A2Z9 1011 aa14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 SLC5A1P13866 664 aa14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 CEP57L1Q8IYX8 460 aa14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 TNRQ92752 1358 aa14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 F6X3S4 739 aa14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 SSBP05455 408 aaKnown RBP eCLIP14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 CEP131Q9UPN4 1083 aa14.06□□□□□ -0.16
AMBRA1-201ENST00000314845 POLR3DP05423 398 aaPredicted RBP14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 ZNF76P36508 570 aa14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 CBFA2T2O43439 604 aa14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 MKNK2Q9HBH9 465 aa14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 ACEP12821 1306 aa14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 DZIP1Q86YF9 867 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 ANKIB1Q9P2G1 1089 aa14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 HMGB1P09429 215 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 HMGN5P82970 282 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 LRRFIP2Q9Y608 721 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 ANKRD36BQ8N2N9 1353 aa14.05□□□□□ -0.16
AMBRA1-201ENST00000314845 NUP62CLQ9H1M0 184 aa14.04□□□□□ -0.16
AMBRA1-201ENST00000314845 ZNF608Q9ULD9 1512 aaPredicted RBP14.04□□□□□ -0.16
AMBRA1-201ENST00000314845 CRACR2BQ8N4Y2 399 aaPredicted RBP14.04□□□□□ -0.16
AMBRA1-201ENST00000314845 TANGO6Q9C0B7 1094 aa14.04□□□□□ -0.16
AMBRA1-201ENST00000314845 DEF6Q9H4E7 631 aa14.04□□□□□ -0.16
AMBRA1-201ENST00000314845 MINDY4BA8MYZ0 360 aa14.04□□□□□ -0.16
AMBRA1-201ENST00000314845 PRPF40BQ6NWY9 871 aaKnown RBP14.04□□□□□ -0.16
AMBRA1-201ENST00000314845 SLF2Q8IX21 1173 aa14.04□□□□□ -0.16
AMBRA1-201ENST00000314845 SH2B1Q9NRF2 756 aaPredicted RBP14.04□□□□□ -0.16
AMBRA1-201ENST00000314845 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 RNF41Q9H4P4 317 aaPredicted RBP14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 IL16Q14005 1332 aa14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 MPHOSPH10O00566 681 aaKnown RBP14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 PAF1Q8N7H5 531 aa14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 CTCFLQ8NI51 663 aaPredicted RBP14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 DDX11Q96FC9 970 aa14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 KDM5BQ9UGL1 1544 aa14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 RPGRQ92834 1020 aaKnown RBP14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 UPF3BQ9BZI7 483 aaKnown RBP14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
AMBRA1-201ENST00000314845 TTC21AQ8NDW8 1320 aa14.02□□□□□ -0.16
AMBRA1-201ENST00000314845 CCDC8Q9H0W5 538 aaPredicted RBP14.02□□□□□ -0.16
AMBRA1-201ENST00000314845 ANKRD24Q8TF21 1146 aa14.02□□□□□ -0.16
AMBRA1-201ENST00000314845 CDC5LQ99459 802 aaKnown RBP14.02□□□□□ -0.16
AMBRA1-201ENST00000314845 ZBTB3Q9H5J0 574 aa14.02□□□□□ -0.16
AMBRA1-201ENST00000314845 MCM4P33991 863 aa14.02□□□□□ -0.17
AMBRA1-201ENST00000314845 MTERF4Q7Z6M4 381 aaKnown RBP14.02□□□□□ -0.17
AMBRA1-201ENST00000314845 TRIM27P14373 513 aa14.02□□□□□ -0.17
AMBRA1-201ENST00000314845 SPC24Q8NBT2 197 aa14.02□□□□□ -0.17
AMBRA1-201ENST00000314845 ECHDC1Q9NTX5 307 aa14.02□□□□□ -0.17
AMBRA1-201ENST00000314845 SNRPA1P09661 255 aaKnown RBP14.01□□□□□ -0.17
AMBRA1-201ENST00000314845 CWC25Q9NXE8 425 aaPredicted RBP14.01□□□□□ -0.17
AMBRA1-201ENST00000314845 PIK3R4Q99570 1358 aa14.01□□□□□ -0.17
AMBRA1-201ENST00000314845 GPATCH8Q9UKJ3 1502 aaKnown RBP14.01□□□□□ -0.17
AMBRA1-201ENST00000314845 SMTNL1A8MU46 457 aa14.01□□□□□ -0.17
AMBRA1-201ENST00000314845 ZNF444Q8N0Y2 327 aaPredicted RBP14.01□□□□□ -0.17
AMBRA1-201ENST00000314845 ZNF213O14771 459 aa14□□□□□ -0.17
AMBRA1-201ENST00000314845 NOM1Q5C9Z4 860 aaKnown RBP14□□□□□ -0.17
AMBRA1-201ENST00000314845 PIBF1Q8WXW3 757 aa14□□□□□ -0.17
AMBRA1-201ENST00000314845 GPTP24298 496 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms