RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PLEKHO1Q53GL0 409 aaPredicted RBP15.51■□□□□ 0.07
RNF4-201ENST00000314289 PRAMEF22A3QJZ6 481 aa15.5■□□□□ 0.07
RNF4-201ENST00000314289 C1orf141Q5JVX7 400 aa15.5■□□□□ 0.07
RNF4-201ENST00000314289 TBC1D32Q96NH3 1257 aa15.5■□□□□ 0.07
RNF4-201ENST00000314289 USP54Q70EL1 1684 aa15.5■□□□□ 0.07
RNF4-201ENST00000314289 CSB-PGBD3P0DP91 1061 aa15.5■□□□□ 0.07
RNF4-201ENST00000314289 ANKRD44Q8N8A2 993 aa15.5■□□□□ 0.07
RNF4-201ENST00000314289 MST1RQ04912 1400 aa15.5■□□□□ 0.07
RNF4-201ENST00000314289 SLKQ9H2G2 1235 aaPredicted RBP15.49■□□□□ 0.07
RNF4-201ENST00000314289 ATP10DQ9P241 1426 aa15.49■□□□□ 0.07
RNF4-201ENST00000314289 RGPD5Q99666 1765 aa15.49■□□□□ 0.07
RNF4-201ENST00000314289 AKAP4Q5JQC9 854 aa15.49■□□□□ 0.07
RNF4-201ENST00000314289 DCTPP1Q9H773 170 aa15.49■□□□□ 0.07
RNF4-201ENST00000314289 CHPF2Q9P2E5 772 aa15.49■□□□□ 0.07
RNF4-201ENST00000314289 FRAT2O75474 233 aaPredicted RBP15.48■□□□□ 0.07
RNF4-201ENST00000314289 EIF4A1P60842 406 aaKnown RBP15.48■□□□□ 0.07
RNF4-201ENST00000314289 C22orf23Q9BZE7 217 aa15.48■□□□□ 0.07
RNF4-201ENST00000314289 CEMIPQ8WUJ3 1361 aa15.48■□□□□ 0.07
RNF4-201ENST00000314289 EXOC6BQ9Y2D4 811 aa15.48■□□□□ 0.07
RNF4-201ENST00000314289 ERBB3P21860 1342 aa15.48■□□□□ 0.07
RNF4-201ENST00000314289 RNMTO43148 476 aaKnown RBP15.47■□□□□ 0.07
RNF4-201ENST00000314289 CCT4P50991 539 aaKnown RBP15.47■□□□□ 0.07
RNF4-201ENST00000314289 CADPS2Q86UW7 1296 aa15.47■□□□□ 0.07
RNF4-201ENST00000314289 SLC39A6Q13433 755 aa15.46■□□□□ 0.07
RNF4-201ENST00000314289 RPAP2Q8IXW5 612 aaPredicted RBP15.46■□□□□ 0.07
RNF4-201ENST00000314289 LRRC37A3O60309 1634 aa15.46■□□□□ 0.07
RNF4-201ENST00000314289 TRPM3Q9HCF6 1732 aaPredicted RBP15.46■□□□□ 0.07
RNF4-201ENST00000314289 EIF5BO60841 1220 aaKnown RBP15.46■□□□□ 0.07
RNF4-201ENST00000314289 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.07
RNF4-201ENST00000314289 PLEKHM2Q8IWE5 1019 aa15.46■□□□□ 0.07
RNF4-201ENST00000314289 ZNF335Q9H4Z2 1342 aaPredicted RBP15.46■□□□□ 0.06
RNF4-201ENST00000314289 GSPT1P15170 499 aaKnown RBP15.45■□□□□ 0.06
RNF4-201ENST00000314289 SLIT3O75094 1523 aa15.45■□□□□ 0.06
RNF4-201ENST00000314289 MED1Q15648 1581 aaPredicted RBP15.45■□□□□ 0.06
RNF4-201ENST00000314289 PNMA6EA0A0J9YXQ4 647 aa15.45■□□□□ 0.06
RNF4-201ENST00000314289 AMOTQ4VCS5 1084 aa15.45■□□□□ 0.06
RNF4-201ENST00000314289 BMP2KLQ5H9B9 411 aa15.45■□□□□ 0.06
RNF4-201ENST00000314289 RAPGEF4Q8WZA2 1011 aa15.45■□□□□ 0.06
RNF4-201ENST00000314289 LRRFIP2Q9Y608 721 aaKnown RBP15.45■□□□□ 0.06
RNF4-201ENST00000314289 KDM4FA0A1W2PPD8 638 aa15.44■□□□□ 0.06
RNF4-201ENST00000314289 PROSER3Q2NL68 480 aa15.44■□□□□ 0.06
RNF4-201ENST00000314289 GNAI2P04899 355 aa15.44■□□□□ 0.06
RNF4-201ENST00000314289 TBC1D9Q6ZT07 1266 aa15.44■□□□□ 0.06
RNF4-201ENST00000314289 NPHP3Q7Z494 1330 aa15.44■□□□□ 0.06
RNF4-201ENST00000314289 TBC1D2Q9BYX2 928 aa15.44■□□□□ 0.06
RNF4-201ENST00000314289 PI4KAP2A4QPH2 592 aa15.43■□□□□ 0.06
RNF4-201ENST00000314289 PI4KAP1Q8N8J0 262 aa15.43■□□□□ 0.06
RNF4-201ENST00000314289 USP44Q9H0E7 712 aa15.42■□□□□ 0.06
RNF4-201ENST00000314289 BRINP3Q76B58 766 aa15.42■□□□□ 0.06
RNF4-201ENST00000314289 PIP4K2AP48426 406 aaPredicted RBP15.41■□□□□ 0.06
RNF4-201ENST00000314289 AIMP1Q12904 312 aaKnown RBP15.41■□□□□ 0.06
RNF4-201ENST00000314289 BECN1Q14457 450 aa15.41■□□□□ 0.06
RNF4-201ENST00000314289 NFATC2IPQ8NCF5 419 aa15.41■□□□□ 0.06
RNF4-201ENST00000314289 FAM208AQ9UK61 1670 aaKnown RBP15.41■□□□□ 0.06
RNF4-201ENST00000314289 NBPF7P0C2Y1 421 aaPredicted RBP15.4■□□□□ 0.06
RNF4-201ENST00000314289 BABAM1Q9NWV8 329 aa15.4■□□□□ 0.06
RNF4-201ENST00000314289 HMMRO75330 724 aa15.4■□□□□ 0.06
RNF4-201ENST00000314289 UBTFL1P0CB47 393 aaPredicted RBP15.4■□□□□ 0.06
RNF4-201ENST00000314289 KIF1AQ12756 1690 aa15.39■□□□□ 0.05
RNF4-201ENST00000314289 GIGYF1O75420 1035 aaPredicted RBP15.39■□□□□ 0.05
RNF4-201ENST00000314289 SPATA31A3Q5VYP0 1347 aa15.39■□□□□ 0.05
RNF4-201ENST00000314289 TATP17735 454 aaPredicted RBP15.39■□□□□ 0.05
RNF4-201ENST00000314289 ALS2Q96Q42 1657 aa15.39■□□□□ 0.05
RNF4-201ENST00000314289 GNAI3P08754 354 aa15.38■□□□□ 0.05
RNF4-201ENST00000314289 TTC22Q5TAA0 569 aa15.38■□□□□ 0.05
RNF4-201ENST00000314289 SRCIN1Q9C0H9 1055 aa15.38■□□□□ 0.05
RNF4-201ENST00000314289 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
RNF4-201ENST00000314289 IL1RAPL2Q9NP60 686 aa15.38■□□□□ 0.05
RNF4-201ENST00000314289 PHRF1Q9P1Y6 1649 aaKnown RBP15.38■□□□□ 0.05
RNF4-201ENST00000314289 MYL6BP14649 208 aa15.37■□□□□ 0.05
RNF4-201ENST00000314289 SLAIN2Q9P270 581 aa15.37■□□□□ 0.05
RNF4-201ENST00000314289 MEGF6O75095 1541 aa15.37■□□□□ 0.05
RNF4-201ENST00000314289 SDSP20132 328 aa15.37■□□□□ 0.05
RNF4-201ENST00000314289 DNAAF4Q8WXU2 420 aa15.37■□□□□ 0.05
RNF4-201ENST00000314289 PRDM11Q9NQV5 511 aa15.37■□□□□ 0.05
RNF4-201ENST00000314289 TNS3Q68CZ2 1445 aa15.37■□□□□ 0.05
RNF4-201ENST00000314289 CWF19L2Q2TBE0 894 aaKnown RBP15.37■□□□□ 0.05
RNF4-201ENST00000314289 PHKG2P15735 406 aa15.36■□□□□ 0.05
RNF4-201ENST00000314289 MAP3K2Q9Y2U5 619 aa15.36■□□□□ 0.05
RNF4-201ENST00000314289 CYP27B1O15528 508 aa15.36■□□□□ 0.05
RNF4-201ENST00000314289 CDC45O75419 566 aa15.36■□□□□ 0.05
RNF4-201ENST00000314289 ATP8B2P98198 1209 aa15.36■□□□□ 0.05
RNF4-201ENST00000314289 DBF4Q9UBU7 674 aaPredicted RBP15.36■□□□□ 0.05
RNF4-201ENST00000314289 LMO7Q8WWI1 1683 aa15.35■□□□□ 0.05
RNF4-201ENST00000314289 PPP1R42Q7Z4L9 355 aa15.35■□□□□ 0.05
RNF4-201ENST00000314289 STRN4Q9NRL3 753 aa15.35■□□□□ 0.05
RNF4-201ENST00000314289 BEND3Q5T5X7 828 aa15.35■□□□□ 0.05
RNF4-201ENST00000314289 ZNF790Q6PG37 636 aa15.35■□□□□ 0.05
RNF4-201ENST00000314289 ADCY9O60503 1353 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 NCAPD2Q15021 1401 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 SRGAP3O43295 1099 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 TOM1L2Q6ZVM7 507 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 LRRCC1Q9C099 1032 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 SLC52A2Q9HAB3 445 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 SPG7Q9UQ90 795 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 DCCP43146 1447 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 KDM3BQ7LBC6 1761 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 ZNF496Q96IT1 587 aaPredicted RBP15.34■□□□□ 0.05
RNF4-201ENST00000314289 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
RNF4-201ENST00000314289 KDM6AO15550 1401 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms