RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 ZNF853P0CG23 659 aa35.48■■■■□ 3.27
CGREF1-202ENST00000312734 SYTL4Q96C24 671 aaPredicted RBP35.48■■■■□ 3.27
CGREF1-202ENST00000312734 BRWD3Q6RI45 1802 aa35.47■■■■□ 3.27
CGREF1-202ENST00000312734 PRIM1P49642 420 aaKnown RBP35.46■■■■□ 3.27
CGREF1-202ENST00000312734 MYH16Q9H6N6 1097 aa35.46■■■■□ 3.27
CGREF1-202ENST00000312734 BTBD11A6QL63 1104 aa35.46■■■■□ 3.27
CGREF1-202ENST00000312734 CHL1O00533 1208 aa35.46■■■■□ 3.27
CGREF1-202ENST00000312734 TSPYL4Q9UJ04 414 aa35.46■■■■□ 3.27
CGREF1-202ENST00000312734 MBIPQ9NS73 344 aa35.45■■■■□ 3.27
CGREF1-202ENST00000312734 TOGARAM1Q9Y4F4 1720 aa35.45■■■■□ 3.26
CGREF1-202ENST00000312734 TMOD3Q9NYL9 352 aa35.44■■■■□ 3.26
CGREF1-202ENST00000312734 TRMT2AQ8IZ69 625 aaKnown RBP35.43■■■■□ 3.26
CGREF1-202ENST00000312734 DUSP27Q5VZP5 1158 aa35.43■■■■□ 3.26
CGREF1-202ENST00000312734 FANCIQ9NVI1 1328 aa35.42■■■■□ 3.26
CGREF1-202ENST00000312734 KAT6BQ8WYB5 2073 aa35.42■■■■□ 3.26
CGREF1-202ENST00000312734 MRC1P22897 1456 aa35.4■■■■□ 3.26
CGREF1-202ENST00000312734 KCNQ2O43526 872 aa35.4■■■■□ 3.26
CGREF1-202ENST00000312734 PIGBQ92521 554 aa35.4■■■■□ 3.26
CGREF1-202ENST00000312734 SLC39A6Q13433 755 aa35.39■■■■□ 3.26
CGREF1-202ENST00000312734 DOT1LQ8TEK3 1739 aa35.39■■■■□ 3.26
CGREF1-202ENST00000312734 KCNQ3O43525 872 aa35.39■■■■□ 3.26
CGREF1-202ENST00000312734 BABAM1Q9NWV8 329 aa35.39■■■■□ 3.26
CGREF1-202ENST00000312734 SIPA1L3O60292 1781 aaPredicted RBP35.37■■■■□ 3.25
CGREF1-202ENST00000312734 FAM196AQ6ZSG2 479 aa35.36■■■■□ 3.25
CGREF1-202ENST00000312734 ITGB4P16144 1822 aa35.35■■■■□ 3.25
CGREF1-202ENST00000312734 EXOSC9Q06265 439 aaKnown RBP35.34■■■■□ 3.25
CGREF1-202ENST00000312734 BCL9O00512 1426 aa35.33■■■■□ 3.25
CGREF1-202ENST00000312734 ZNF790Q6PG37 636 aa35.33■■■■□ 3.25
CGREF1-202ENST00000312734 PTF1AQ7RTS3 328 aa35.32■■■■□ 3.25
CGREF1-202ENST00000312734 TTC5Q8N0Z6 440 aa35.32■■■■□ 3.24
CGREF1-202ENST00000312734 ASAP1Q9ULH1 1129 aa35.31■■■■□ 3.24
CGREF1-202ENST00000312734 KRT24Q2M2I5 525 aa35.3■■■■□ 3.24
CGREF1-202ENST00000312734 ELL2O00472 640 aaPredicted RBP35.29■■■■□ 3.24
CGREF1-202ENST00000312734 EIF4A1P60842 406 aaKnown RBP35.28■■■■□ 3.24
CGREF1-202ENST00000312734 C8orf58Q8NAV2 365 aa35.28■■■■□ 3.24
CGREF1-202ENST00000312734 ATG3Q9NT62 314 aa35.28■■■■□ 3.24
CGREF1-202ENST00000312734 CENPBP07199 599 aaPredicted RBP35.27■■■■□ 3.24
CGREF1-202ENST00000312734 KDM3BQ7LBC6 1761 aa35.26■■■■□ 3.24
CGREF1-202ENST00000312734 TSPYL6Q8N831 410 aa35.26■■■■□ 3.24
CGREF1-202ENST00000312734 TRIM37O94972 964 aa35.25■■■■□ 3.23
CGREF1-202ENST00000312734 PTCD1O75127 700 aaKnown RBP35.24■■■■□ 3.23
CGREF1-202ENST00000312734 ZNF496Q96IT1 587 aaPredicted RBP35.24■■■■□ 3.23
CGREF1-202ENST00000312734 BCL11BQ9C0K0 894 aaPredicted RBP35.23■■■■□ 3.23
CGREF1-202ENST00000312734 SBF2Q86WG5 1849 aa35.22■■■■□ 3.23
CGREF1-202ENST00000312734 TWISTNBQ3B726 338 aaPredicted RBP35.21■■■■□ 3.23
CGREF1-202ENST00000312734 NHSQ6T4R5 1651 aa35.21■■■■□ 3.23
CGREF1-202ENST00000312734 FMNL2Q96PY5 1086 aa35.21■■■■□ 3.23
CGREF1-202ENST00000312734 RBM42Q9BTD8 480 aaKnown RBP35.2■■■■□ 3.23
CGREF1-202ENST00000312734 EP400Q96L91 3159 aa35.19■■■■□ 3.22
CGREF1-202ENST00000312734 PAPPAQ13219 1627 aa35.18■■■■□ 3.22
CGREF1-202ENST00000312734 VAMP4O75379 141 aa35.17■■■■□ 3.22
CGREF1-202ENST00000312734 PRAMEF22A3QJZ6 481 aa35.17■■■■□ 3.22
CGREF1-202ENST00000312734 SMARCC1Q92922 1105 aaPredicted RBP35.16■■■■□ 3.22
CGREF1-202ENST00000312734 GIGYF1O75420 1035 aaPredicted RBP35.15■■■■□ 3.22
CGREF1-202ENST00000312734 KCPQ6ZWJ8 1503 aa35.15■■■■□ 3.22
CGREF1-202ENST00000312734 PALLDQ8WX93 1383 aa35.14■■■■□ 3.22
CGREF1-202ENST00000312734 HEG1Q9ULI3 1381 aa35.14■■■■□ 3.22
CGREF1-202ENST00000312734 BTAF1O14981 1849 aa35.14■■■■□ 3.22
CGREF1-202ENST00000312734 SNRPA1P09661 255 aaKnown RBP35.13■■■■□ 3.21
CGREF1-202ENST00000312734 NECTIN2Q92692 538 aa35.12■■■■□ 3.21
CGREF1-202ENST00000312734 CT47B1P0C2W7 299 aaPredicted RBP35.11■■■■□ 3.21
CGREF1-202ENST00000312734 EIF2S2P20042 333 aaKnown RBP35.11■■■■□ 3.21
CGREF1-202ENST00000312734 UBR2Q8IWV8 1755 aa35.11■■■■□ 3.21
CGREF1-202ENST00000312734 TCERG1O14776 1098 aaKnown RBP35.1■■■■□ 3.21
CGREF1-202ENST00000312734 RCAN3Q9UKA8 241 aa35.1■■■■□ 3.21
CGREF1-202ENST00000312734 SLC4A9Q96Q91 983 aa35.1■■■■□ 3.21
CGREF1-202ENST00000312734 LOC102724428A0A0B4J2F2 783 aa35.08■■■■□ 3.21
CGREF1-202ENST00000312734 SIK1P57059 783 aa35.08■■■■□ 3.21
CGREF1-202ENST00000312734 USP16Q9Y5T5 823 aa35.08■■■■□ 3.21
CGREF1-202ENST00000312734 APBA3O96018 575 aa35.06■■■■□ 3.2
CGREF1-202ENST00000312734 HOXB7P09629 217 aa35.06■■■■□ 3.2
CGREF1-202ENST00000312734 VSIG10Q8N0Z9 540 aa35.06■■■■□ 3.2
CGREF1-202ENST00000312734 ATP6V1AP38606 617 aa35.06■■■■□ 3.2
CGREF1-202ENST00000312734 RARSP54136 660 aaKnown RBP35.06■■■■□ 3.2
CGREF1-202ENST00000312734 HDGFL1Q5TGJ6 251 aa35.06■■■■□ 3.2
CGREF1-202ENST00000312734 BCL2L13Q9BXK5 485 aa35.06■■■■□ 3.2
CGREF1-202ENST00000312734 DNAJC10Q8IXB1 793 aa35.05■■■■□ 3.2
CGREF1-202ENST00000312734 SOS1Q07889 1333 aaPredicted RBP35.05■■■■□ 3.2
CGREF1-202ENST00000312734 KCNQ4P56696 695 aa35.03■■■■□ 3.2
CGREF1-202ENST00000312734 SSH1Q8WYL5 1049 aa35.03■■■■□ 3.2
CGREF1-202ENST00000312734 BCAR3O75815 825 aa35.02■■■■□ 3.2
CGREF1-202ENST00000312734 CCDC30Q5VVM6 783 aa35.02■■■■□ 3.2
CGREF1-202ENST00000312734 ZNF428Q96B54 188 aa35.02■■■■□ 3.2
CGREF1-202ENST00000312734 C5P01031 1676 aa35.02■■■■□ 3.2
CGREF1-202ENST00000312734 TEX13AQ9BXU3 409 aaPredicted RBP35■■■■□ 3.19
CGREF1-202ENST00000312734 SMC4Q9NTJ3 1288 aa35■■■■□ 3.19
CGREF1-202ENST00000312734 ITPK1Q13572 414 aa34.99■■■■□ 3.19
CGREF1-202ENST00000312734 ALDH1L2Q3SY69 923 aa34.99■■■■□ 3.19
CGREF1-202ENST00000312734 CCNL1Q9UK58 526 aaPredicted RBP34.99■■■■□ 3.19
CGREF1-202ENST00000312734 STK31Q9BXU1 1019 aa34.97■■■■□ 3.19
CGREF1-202ENST00000312734 STARD3NLO95772 234 aa34.96■■■■□ 3.19
CGREF1-202ENST00000312734 CHMP4AQ9BY43 222 aa34.96■■■■□ 3.19
CGREF1-202ENST00000312734 CHPF2Q9P2E5 772 aa34.96■■■■□ 3.19
CGREF1-202ENST00000312734 SLC4A2P04920 1241 aa34.95■■■■□ 3.19
CGREF1-202ENST00000312734 PIP4K2AP48426 406 aaPredicted RBP34.95■■■■□ 3.19
CGREF1-202ENST00000312734 PLSCR1O15162 318 aa34.95■■■■□ 3.18
CGREF1-202ENST00000312734 A1BGP04217 495 aa34.95■■■■□ 3.18
CGREF1-202ENST00000312734 SUPT16HQ9Y5B9 1047 aaKnown RBP34.95■■■■□ 3.18
CGREF1-202ENST00000312734 ANXA1P04083 346 aa34.94■■■■□ 3.18
CGREF1-202ENST00000312734 CYP19A1P11511 503 aaPredicted RBP34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms