RNA–Protein interactions for RNA: ENST00000311832.5

COMMD1-201, Transcript of copper metabolism domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-201ENST00000311832 FHDC1Q9C0D6 1143 aaPredicted RBP25.45■■□□□ 1.66
COMMD1-201ENST00000311832 TJP1Q07157 1748 aa25.44■■□□□ 1.66
COMMD1-201ENST00000311832 CICQ96RK0 1608 aaPredicted RBP25.44■■□□□ 1.66
COMMD1-201ENST00000311832 C1orf141Q5JVX7 400 aa25.43■■□□□ 1.66
COMMD1-201ENST00000311832 SMIM5Q71RC9 77 aa25.43■■□□□ 1.66
COMMD1-201ENST00000311832 SLC4A9Q96Q91 983 aa25.43■■□□□ 1.66
COMMD1-201ENST00000311832 ARXQ96QS3 562 aa25.43■■□□□ 1.66
COMMD1-201ENST00000311832 MRC1P22897 1456 aa25.42■■□□□ 1.66
COMMD1-201ENST00000311832 SYT17Q9BSW7 474 aa25.41■■□□□ 1.66
COMMD1-201ENST00000311832 UTRNP46939 3433 aa25.4■■□□□ 1.66
COMMD1-201ENST00000311832 AKAP4Q5JQC9 854 aa25.4■■□□□ 1.66
COMMD1-201ENST00000311832 MAP3K5Q99683 1374 aa25.4■■□□□ 1.66
COMMD1-201ENST00000311832 MYH14Q7Z406 1995 aaKnown RBP25.4■■□□□ 1.66
COMMD1-201ENST00000311832 ATP6V1AP38606 617 aa25.39■■□□□ 1.66
COMMD1-201ENST00000311832 CABP4P57796 275 aa25.39■■□□□ 1.66
COMMD1-201ENST00000311832 MTHFSDQ2M296 383 aaKnown RBP25.39■■□□□ 1.66
COMMD1-201ENST00000311832 AK7Q96M32 723 aa25.39■■□□□ 1.66
COMMD1-201ENST00000311832 MSH5O43196 834 aa25.38■■□□□ 1.65
COMMD1-201ENST00000311832 SIPA1L3O60292 1781 aaPredicted RBP25.38■■□□□ 1.65
COMMD1-201ENST00000311832 PPP2R1AP30153 589 aa25.37■■□□□ 1.65
COMMD1-201ENST00000311832 NFATC2IPQ8NCF5 419 aa25.37■■□□□ 1.65
COMMD1-201ENST00000311832 LGR6Q9HBX8 967 aa25.37■■□□□ 1.65
COMMD1-201ENST00000311832 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
COMMD1-201ENST00000311832 MSL1Q68DK7 614 aa25.36■■□□□ 1.65
COMMD1-201ENST00000311832 UBR2Q8IWV8 1755 aa25.36■■□□□ 1.65
COMMD1-201ENST00000311832 U2SURPO15042 1029 aaKnown RBP25.35■■□□□ 1.65
COMMD1-201ENST00000311832 PHF14O94880 888 aa25.35■■□□□ 1.65
COMMD1-201ENST00000311832 HMGB2P26583 209 aaKnown RBP25.35■■□□□ 1.65
COMMD1-201ENST00000311832 RBM42Q9BTD8 480 aaKnown RBP25.35■■□□□ 1.65
COMMD1-201ENST00000311832 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.34■■□□□ 1.65
COMMD1-201ENST00000311832 POLD1P28340 1107 aa25.34■■□□□ 1.65
COMMD1-201ENST00000311832 FLAD1Q8NFF5 587 aa25.34■■□□□ 1.65
COMMD1-201ENST00000311832 RNMTO43148 476 aaKnown RBP25.33■■□□□ 1.65
COMMD1-201ENST00000311832 SSFA2P28290 1259 aa25.32■■□□□ 1.64
COMMD1-201ENST00000311832 KCPQ6ZWJ8 1503 aa25.32■■□□□ 1.64
COMMD1-201ENST00000311832 GNPATO15228 680 aa25.31■■□□□ 1.64
COMMD1-201ENST00000311832 SLC52A2Q9HAB3 445 aa25.31■■□□□ 1.64
COMMD1-201ENST00000311832 GOLGB1Q14789 3259 aaKnown RBP25.31■■□□□ 1.64
COMMD1-201ENST00000311832 PTCD1O75127 700 aaKnown RBP25.29■■□□□ 1.64
COMMD1-201ENST00000311832 RSPH6AQ9H0K4 717 aa25.29■■□□□ 1.64
COMMD1-201ENST00000311832 CFAP53Q96M91 514 aa25.28■■□□□ 1.64
COMMD1-201ENST00000311832 CNTNAP4Q9C0A0 1308 aa25.28■■□□□ 1.64
COMMD1-201ENST00000311832 KLHL34Q8N239 644 aa25.27■■□□□ 1.64
COMMD1-201ENST00000311832 NLGN2Q8NFZ4 835 aa25.27■■□□□ 1.64
COMMD1-201ENST00000311832 RC3H1Q5TC82 1133 aaKnown RBP25.26■■□□□ 1.63
COMMD1-201ENST00000311832 PHACTR3Q96KR7 559 aa25.26■■□□□ 1.63
COMMD1-201ENST00000311832 PRKAR2BP31323 418 aa25.25■■□□□ 1.63
COMMD1-201ENST00000311832 SLC39A6Q13433 755 aa25.25■■□□□ 1.63
COMMD1-201ENST00000311832 CHD4Q14839 1912 aa25.24■■□□□ 1.63
COMMD1-201ENST00000311832 IL17REQ8NFR9 667 aa25.23■■□□□ 1.63
COMMD1-201ENST00000311832 DLG5Q8TDM6 1919 aa25.23■■□□□ 1.63
COMMD1-201ENST00000311832 KIF13BQ9NQT8 1826 aa25.23■■□□□ 1.63
COMMD1-201ENST00000311832 GAS2L2Q8NHY3 880 aa25.22■■□□□ 1.63
COMMD1-201ENST00000311832 RTCBQ9Y3I0 505 aaKnown RBP25.22■■□□□ 1.63
COMMD1-201ENST00000311832 KIAA1551Q9HCM1 1747 aa25.21■■□□□ 1.63
COMMD1-201ENST00000311832 DCAF8L1A6NGE4 600 aa25.21■■□□□ 1.63
COMMD1-201ENST00000311832 RPS6KA4O75676 772 aa25.21■■□□□ 1.63
COMMD1-201ENST00000311832 CEMIPQ8WUJ3 1361 aa25.2■■□□□ 1.63
COMMD1-201ENST00000311832 GNAT3A8MTJ3 354 aa25.2■■□□□ 1.62
COMMD1-201ENST00000311832 U2AF1L5P0DN76 240 aaPredicted RBP25.2■■□□□ 1.62
COMMD1-201ENST00000311832 CRKLP46109 303 aaKnown RBP25.2■■□□□ 1.62
COMMD1-201ENST00000311832 U2AF1Q01081 240 aaKnown RBP eCLIP25.2■■□□□ 1.62
COMMD1-201ENST00000311832 ARHGEF1Q92888 912 aaKnown RBP25.2■■□□□ 1.62
COMMD1-201ENST00000311832 NUDCQ9Y266 331 aa25.2■■□□□ 1.62
COMMD1-201ENST00000311832 TRAPPC3LQ5T215 181 aa25.19■■□□□ 1.62
COMMD1-201ENST00000311832 DNAJC10Q8IXB1 793 aa25.19■■□□□ 1.62
COMMD1-201ENST00000311832 INTS5Q6P9B9 1019 aaKnown RBP25.18■■□□□ 1.62
COMMD1-201ENST00000311832 YY1P25490 414 aa25.17■■□□□ 1.62
COMMD1-201ENST00000311832 ADRA2BP18089 450 aa25.16■■□□□ 1.62
COMMD1-201ENST00000311832 FCHSD2O94868 740 aa25.15■■□□□ 1.62
COMMD1-201ENST00000311832 GYS1P13807 737 aa25.15■■□□□ 1.62
COMMD1-201ENST00000311832 CD2APQ9Y5K6 639 aa25.15■■□□□ 1.62
COMMD1-201ENST00000311832 CYP19A1P11511 503 aaPredicted RBP25.14■■□□□ 1.62
COMMD1-201ENST00000311832 DDX10Q13206 875 aaKnown RBP25.14■■□□□ 1.62
COMMD1-201ENST00000311832 N4BP2Q86UW6 1770 aaPredicted RBP25.13■■□□□ 1.61
COMMD1-201ENST00000311832 MMP10P09238 476 aa25.12■■□□□ 1.61
COMMD1-201ENST00000311832 YBX3P16989 372 aaKnown RBP eCLIP25.12■■□□□ 1.61
COMMD1-201ENST00000311832 TEFQ10587 303 aa25.12■■□□□ 1.61
COMMD1-201ENST00000311832 GPR162Q16538 588 aa25.12■■□□□ 1.61
COMMD1-201ENST00000311832 CCDC87Q9NVE4 849 aa25.12■■□□□ 1.61
COMMD1-201ENST00000311832 SRP68Q9UHB9 627 aaKnown RBP25.12■■□□□ 1.61
COMMD1-201ENST00000311832 RFC4P35249 363 aa25.11■■□□□ 1.61
COMMD1-201ENST00000311832 VSIG10Q8N0Z9 540 aa25.11■■□□□ 1.61
COMMD1-201ENST00000311832 SOS1Q07889 1333 aaPredicted RBP25.11■■□□□ 1.61
COMMD1-201ENST00000311832 USP42Q9H9J4 1324 aaKnown RBP25.11■■□□□ 1.61
COMMD1-201ENST00000311832 ZNF790Q6PG37 636 aa25.1■■□□□ 1.61
COMMD1-201ENST00000311832 ZNF496Q96IT1 587 aaPredicted RBP25.1■■□□□ 1.61
COMMD1-201ENST00000311832 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
COMMD1-201ENST00000311832 ZBTB1Q9Y2K1 713 aa25.09■■□□□ 1.61
COMMD1-201ENST00000311832 BRCA1P38398 1863 aaKnown RBP25.09■■□□□ 1.61
COMMD1-201ENST00000311832 HEG1Q9ULI3 1381 aa25.08■■□□□ 1.61
COMMD1-201ENST00000311832 KCNQ3O43525 872 aa25.08■■□□□ 1.61
COMMD1-201ENST00000311832 MCM10Q7L590 875 aa25.08■■□□□ 1.61
COMMD1-201ENST00000311832 TTC5Q8N0Z6 440 aa25.08■■□□□ 1.61
COMMD1-201ENST00000311832 NLGN1Q8N2Q7 840 aa25.08■■□□□ 1.61
COMMD1-201ENST00000311832 PLEKHF1Q96S99 279 aa25.08■■□□□ 1.61
COMMD1-201ENST00000311832 AFDNP55196 1824 aaKnown RBP25.07■■□□□ 1.6
COMMD1-201ENST00000311832 C10orf71Q711Q0 1435 aa25.07■■□□□ 1.6
COMMD1-201ENST00000311832 DCTN1Q14203 1278 aa25.07■■□□□ 1.6
COMMD1-201ENST00000311832 KDM3BQ7LBC6 1761 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms