RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 CWC22Q9HCG8 908 aaKnown RBP20.24■□□□□ 0.83
SSH3-201ENST00000308127 ROBO2Q9HCK4 1378 aa20.23■□□□□ 0.83
SSH3-201ENST00000308127 MX1P20591 662 aa20.23■□□□□ 0.83
SSH3-201ENST00000308127 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.23■□□□□ 0.83
SSH3-201ENST00000308127 RIMBP3CA6NJZ7 1639 aa20.22■□□□□ 0.83
SSH3-201ENST00000308127 RIMBP3BA6NNM3 1639 aa20.22■□□□□ 0.83
SSH3-201ENST00000308127 RIMBP3Q9UFD9 1639 aa20.22■□□□□ 0.83
SSH3-201ENST00000308127 LRRCC1Q9C099 1032 aa20.22■□□□□ 0.83
SSH3-201ENST00000308127 ESF1Q9H501 851 aaKnown RBP20.22■□□□□ 0.83
SSH3-201ENST00000308127 RIMS1Q86UR5 1692 aaKnown RBP20.22■□□□□ 0.83
SSH3-201ENST00000308127 KIF24Q5T7B8 1368 aa20.22■□□□□ 0.83
SSH3-201ENST00000308127 FLIIQ13045 1269 aa20.21■□□□□ 0.83
SSH3-201ENST00000308127 STK31Q9BXU1 1019 aa20.21■□□□□ 0.83
SSH3-201ENST00000308127 CRB1P82279 1406 aa20.21■□□□□ 0.83
SSH3-201ENST00000308127 RRP9O43818 475 aaKnown RBP20.2■□□□□ 0.83
SSH3-201ENST00000308127 USHBP1Q8N6Y0 703 aa20.2■□□□□ 0.83
SSH3-201ENST00000308127 FAM13BQ9NYF5 915 aa20.2■□□□□ 0.82
SSH3-201ENST00000308127 TSPOAP1O95153 1857 aa20.2■□□□□ 0.82
SSH3-201ENST00000308127 CHMLP26374 656 aa20.2■□□□□ 0.82
SSH3-201ENST00000308127 AMPHP49418 695 aa20.2■□□□□ 0.82
SSH3-201ENST00000308127 EYA1Q99502 592 aa20.2■□□□□ 0.82
SSH3-201ENST00000308127 DLC1Q96QB1 1528 aa20.19■□□□□ 0.82
SSH3-201ENST00000308127 CPA1P15085 419 aa20.19■□□□□ 0.82
SSH3-201ENST00000308127 LRSAM1Q6UWE0 723 aa20.19■□□□□ 0.82
SSH3-201ENST00000308127 DDX54Q8TDD1 881 aaKnown RBP20.19■□□□□ 0.82
SSH3-201ENST00000308127 CCT4P50991 539 aaKnown RBP20.19■□□□□ 0.82
SSH3-201ENST00000308127 IBTKQ9P2D0 1353 aaPredicted RBP20.19■□□□□ 0.82
SSH3-201ENST00000308127 OFD1O75665 1012 aa20.18■□□□□ 0.82
SSH3-201ENST00000308127 KIAA0232Q92628 1395 aa20.18■□□□□ 0.82
SSH3-201ENST00000308127 HAP1P54257 671 aaPredicted RBP20.18■□□□□ 0.82
SSH3-201ENST00000308127 ZNF830Q96NB3 372 aaPredicted RBP20.18■□□□□ 0.82
SSH3-201ENST00000308127 PHAXQ9H814 394 aaKnown RBP20.18■□□□□ 0.82
SSH3-201ENST00000308127 ANXA1P04083 346 aa20.17■□□□□ 0.82
SSH3-201ENST00000308127 EIF2S2P20042 333 aaKnown RBP20.17■□□□□ 0.82
SSH3-201ENST00000308127 JARID2Q92833 1246 aaPredicted RBP20.16■□□□□ 0.82
SSH3-201ENST00000308127 BRD1O95696 1058 aa20.16■□□□□ 0.82
SSH3-201ENST00000308127 PTMAP06454 111 aaKnown RBP20.16■□□□□ 0.82
SSH3-201ENST00000308127 NGDNQ8NEJ9 315 aaKnown RBP20.15■□□□□ 0.82
SSH3-201ENST00000308127 ZMYND15Q9H091 742 aa20.15■□□□□ 0.82
SSH3-201ENST00000308127 OSBPL3Q9H4L5 887 aa20.15■□□□□ 0.82
SSH3-201ENST00000308127 PDLIM2Q96JY6 352 aa20.15■□□□□ 0.82
SSH3-201ENST00000308127 GLIPR1L2Q4G1C9 344 aa20.14■□□□□ 0.82
SSH3-201ENST00000308127 C14orf37Q86TY3 774 aa20.14■□□□□ 0.82
SSH3-201ENST00000308127 NOL7Q9UMY1 257 aaKnown RBP20.14■□□□□ 0.82
SSH3-201ENST00000308127 SETD1AO15047 1707 aaKnown RBP20.14■□□□□ 0.81
SSH3-201ENST00000308127 SURF6O75683 361 aaKnown RBP20.14■□□□□ 0.81
SSH3-201ENST00000308127 TPM2P07951 284 aa20.14■□□□□ 0.81
SSH3-201ENST00000308127 MCCP23508 829 aa20.14■□□□□ 0.81
SSH3-201ENST00000308127 SALL3Q9BXA9 1300 aa20.14■□□□□ 0.81
SSH3-201ENST00000308127 USP48Q86UV5 1035 aa20.13■□□□□ 0.81
SSH3-201ENST00000308127 REREQ9P2R6 1566 aa20.13■□□□□ 0.81
SSH3-201ENST00000308127 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
SSH3-201ENST00000308127 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
SSH3-201ENST00000308127 PLCB2Q00722 1185 aa20.13■□□□□ 0.81
SSH3-201ENST00000308127 SPG7Q9UQ90 795 aa20.13■□□□□ 0.81
SSH3-201ENST00000308127 LTKP29376 864 aa20.13■□□□□ 0.81
SSH3-201ENST00000308127 ATP8B2P98198 1209 aa20.13■□□□□ 0.81
SSH3-201ENST00000308127 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.13■□□□□ 0.81
SSH3-201ENST00000308127 C17orf53Q8N3J3 647 aaPredicted RBP20.13■□□□□ 0.81
SSH3-201ENST00000308127 CEBPAP49715 358 aaPredicted RBP20.12■□□□□ 0.81
SSH3-201ENST00000308127 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
SSH3-201ENST00000308127 CNPY2Q9Y2B0 182 aa20.12■□□□□ 0.81
SSH3-201ENST00000308127 C3P01024 1663 aa20.11■□□□□ 0.81
SSH3-201ENST00000308127 UBTFL1P0CB47 393 aaPredicted RBP20.11■□□□□ 0.81
SSH3-201ENST00000308127 ZKSCAN5Q9Y2L8 839 aa20.11■□□□□ 0.81
SSH3-201ENST00000308127 UQCRHLA0A096LP55 91 aa20.11■□□□□ 0.81
SSH3-201ENST00000308127 UQCRHP07919 91 aa20.11■□□□□ 0.81
SSH3-201ENST00000308127 NLRP6P59044 892 aa20.1■□□□□ 0.81
SSH3-201ENST00000308127 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
SSH3-201ENST00000308127 PPP1R42Q7Z4L9 355 aa20.1■□□□□ 0.81
SSH3-201ENST00000308127 IL17REQ8NFR9 667 aa20.1■□□□□ 0.81
SSH3-201ENST00000308127 OVOS2A0A0J9YW53 1432 aa20.1■□□□□ 0.81
SSH3-201ENST00000308127 OVOS2Q6IE36 1432 aa20.1■□□□□ 0.81
SSH3-201ENST00000308127 MON2Q7Z3U7 1717 aa20.1■□□□□ 0.81
SSH3-201ENST00000308127 RASEFQ8IZ41 740 aa20.1■□□□□ 0.81
SSH3-201ENST00000308127 TSC1Q92574 1164 aa20.1■□□□□ 0.81
SSH3-201ENST00000308127 TSPY26PQ9H489 355 aa20.1■□□□□ 0.81
SSH3-201ENST00000308127 GNAI3P08754 354 aa20.09■□□□□ 0.81
SSH3-201ENST00000308127 CUL4AQ13619 759 aa20.09■□□□□ 0.81
SSH3-201ENST00000308127 CCDC30Q5VVM6 783 aa20.09■□□□□ 0.81
SSH3-201ENST00000308127 CEP170BQ9Y4F5 1589 aaPredicted RBP20.09■□□□□ 0.81
SSH3-201ENST00000308127 USP6P35125 1406 aa20.09■□□□□ 0.81
SSH3-201ENST00000308127 SRCIN1Q9C0H9 1055 aa20.09■□□□□ 0.81
SSH3-201ENST00000308127 USP25Q9UHP3 1055 aa20.09■□□□□ 0.81
SSH3-201ENST00000308127 FIBPO43427 364 aa20.09■□□□□ 0.81
SSH3-201ENST00000308127 NBPF7P0C2Y1 421 aaPredicted RBP20.09■□□□□ 0.81
SSH3-201ENST00000308127 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.81
SSH3-201ENST00000308127 TCHHQ07283 1943 aa20.08■□□□□ 0.8
SSH3-201ENST00000308127 SRGAP3O43295 1099 aa20.08■□□□□ 0.8
SSH3-201ENST00000308127 MBD3O95983 291 aa20.08■□□□□ 0.8
SSH3-201ENST00000308127 RBM33Q96EV2 1170 aaKnown RBP20.08■□□□□ 0.8
SSH3-201ENST00000308127 ITSN1Q15811 1721 aa20.07■□□□□ 0.8
SSH3-201ENST00000308127 FAM177BA6PVY3 158 aa20.07■□□□□ 0.8
SSH3-201ENST00000308127 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
SSH3-201ENST00000308127 CHMP3Q9Y3E7 222 aa20.07■□□□□ 0.8
SSH3-201ENST00000308127 SOS1Q07889 1333 aaPredicted RBP20.07■□□□□ 0.8
SSH3-201ENST00000308127 LARGE1O95461 756 aa20.06■□□□□ 0.8
SSH3-201ENST00000308127 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.06■□□□□ 0.8
SSH3-201ENST00000308127 KCNQ3O43525 872 aa20.06■□□□□ 0.8
SSH3-201ENST00000308127 HCLS1P14317 486 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms