RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 MPNDQ8N594 471 aa4.72□□□□□ -1.65
USH2A-201ENST00000307340 PPM1EQ8WY54 764 aa4.72□□□□□ -1.65
USH2A-201ENST00000307340 GLRX3O76003 335 aaKnown RBP4.72□□□□□ -1.65
USH2A-201ENST00000307340 CDC42BPBQ9Y5S2 1711 aa4.72□□□□□ -1.65
USH2A-201ENST00000307340 EZRP15311 586 aaKnown RBP4.72□□□□□ -1.65
USH2A-201ENST00000307340 NGDNQ8NEJ9 315 aaKnown RBP4.72□□□□□ -1.65
USH2A-201ENST00000307340 KANK4Q5T7N3 995 aaPredicted RBP4.71□□□□□ -1.65
USH2A-201ENST00000307340 SF3B2Q13435 895 aaKnown RBP4.71□□□□□ -1.65
USH2A-201ENST00000307340 CCAR1Q8IX12 1150 aaKnown RBP4.71□□□□□ -1.65
USH2A-201ENST00000307340 ABCA9Q8IUA7 1624 aa4.71□□□□□ -1.65
USH2A-201ENST00000307340 PLCB2Q00722 1185 aa4.71□□□□□ -1.65
USH2A-201ENST00000307340 TPRNQ4KMQ1 711 aa4.71□□□□□ -1.65
USH2A-201ENST00000307340 CCDC57Q2TAC2 916 aa4.71□□□□□ -1.65
USH2A-201ENST00000307340 RASSF8Q8NHQ8 419 aa4.71□□□□□ -1.65
USH2A-201ENST00000307340 ZGPATQ8N5A5 531 aaKnown RBP4.71□□□□□ -1.66
USH2A-201ENST00000307340 ODF2Q5BJF6 829 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 B4GALNT3Q6L9W6 998 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 BBXQ8WY36 941 aaPredicted RBP4.71□□□□□ -1.66
USH2A-201ENST00000307340 PDCL3Q9H2J4 239 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 CCDC102AQ96A19 550 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 DMRT2Q9Y5R5 561 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 CETN1Q12798 172 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 MPHOSPH6Q99547 160 aaKnown RBP4.71□□□□□ -1.66
USH2A-201ENST00000307340 ZBTB7CA1YPR0 619 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 HOXB7P09629 217 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 HAUS2Q9NVX0 235 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 MVPQ14764 893 aaKnown RBP4.71□□□□□ -1.66
USH2A-201ENST00000307340 CCDC158Q5M9N0 1113 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 TEX2Q8IWB9 1127 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 ZNF652Q9Y2D9 606 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 CARMIL3Q8ND23 1372 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 NEFHP12036 1026 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 NOL7Q9UMY1 257 aaKnown RBP4.71□□□□□ -1.66
USH2A-201ENST00000307340 LRRIQ1Q96JM4 1722 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 CCDC61Q9Y6R9 512 aa4.71□□□□□ -1.66
USH2A-201ENST00000307340 UBTFL1P0CB47 393 aaPredicted RBP4.71□□□□□ -1.66
USH2A-201ENST00000307340 ZFYP08048 801 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 POTEJP0CG39 1038 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 AOX1Q06278 1338 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 PLA2R1Q13018 1463 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 HOMER1Q86YM7 354 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 POLR3AO14802 1390 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 PCP11498 1178 aaKnown RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 LMOD2Q6P5Q4 547 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 FAM177A1Q8N128 213 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 TAOK2Q9UL54 1235 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 RGS22Q8NE09 1264 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 KIF18AQ8NI77 898 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 TACO1Q9BSH4 297 aaKnown RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 MAGEC2Q9UBF1 373 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 ATP10AO60312 1499 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 JAKMIP2Q96AA8 810 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 ARID4AP29374 1257 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 DUSP27Q5VZP5 1158 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 RAPGEF4Q8WZA2 1011 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 LRRC45Q96CN5 670 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 DDX19AQ9NUU7 478 aaKnown RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 SPG7Q9UQ90 795 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 SAMD9LQ8IVG5 1584 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 DENND4BO75064 1496 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 ARHGEF10O15013 1369 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 CALCOCO1Q9P1Z2 691 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 GIGYF2Q6Y7W6 1299 aaKnown RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 SPATS2Q86XZ4 545 aaKnown RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 PLCH2O75038 1416 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 GCOM1H8Y6P7 765 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 ZNF189O75820 626 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 MYZAPP0CAP1 466 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 PDE6BP35913 854 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 FAM114A1Q8IWE2 563 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 GABPB2Q8TAK5 448 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 RMND1Q9NWS8 449 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 R3HCC1Q9Y3T6 440 aaKnown RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 CYP46A1Q9Y6A2 500 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 RPGRIP1Q96KN7 1286 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 ANKRD45Q5TZF3 282 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 VPS37DQ86XT2 251 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 HDAC1Q13547 482 aaPredicted RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 CEP57L1Q8IYX8 460 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 RUSC2Q8N2Y8 1516 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 TSGA10Q9BZW7 698 aa4.7□□□□□ -1.66
USH2A-201ENST00000307340 GPATCH8Q9UKJ3 1502 aaKnown RBP4.7□□□□□ -1.66
USH2A-201ENST00000307340 SNX21Q969T3 373 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 DNAJC2Q99543 621 aaKnown RBP4.69□□□□□ -1.66
USH2A-201ENST00000307340 SDF4Q9BRK5 362 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 KIF1BPQ96EK5 621 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 BACH2Q9BYV9 841 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 SYCP1Q15431 976 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 SLC26A8Q96RN1 970 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 TRIM34Q9BYJ4 488 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 MRGBPQ9NV56 204 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 K7ELQ4 463 aaPredicted RBP4.69□□□□□ -1.66
USH2A-201ENST00000307340 MSH6P52701 1360 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 GBP1P32455 592 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 PLCD4Q9BRC7 762 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 ANKS4BQ8N8V4 417 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 HDAC9Q9UKV0 1011 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 GNAT2P19087 354 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 UNC13BO14795 1591 aa4.69□□□□□ -1.66
USH2A-201ENST00000307340 ZSCAN30Q86W11 494 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms