RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
SYNPO2-201ENST00000307142 MINDY4BA8MYZ0 360 aa12.75□□□□□ -0.37
SYNPO2-201ENST00000307142 TRIM22Q8IYM9 498 aa12.75□□□□□ -0.37
SYNPO2-201ENST00000307142 DBF4Q9UBU7 674 aaPredicted RBP12.75□□□□□ -0.37
SYNPO2-201ENST00000307142 ODF2Q5BJF6 829 aa12.75□□□□□ -0.37
SYNPO2-201ENST00000307142 CT47A1Q5JQC4 288 aaPredicted RBP12.75□□□□□ -0.37
SYNPO2-201ENST00000307142 CWC25Q9NXE8 425 aaPredicted RBP12.75□□□□□ -0.37
SYNPO2-201ENST00000307142 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
SYNPO2-201ENST00000307142 KCNA6P17658 529 aa12.75□□□□□ -0.37
SYNPO2-201ENST00000307142 ABCC1P33527 1531 aa12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 SNRPA1P09661 255 aaKnown RBP12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 CWC27Q6UX04 472 aaKnown RBP12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 MYO1BO43795 1136 aa12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 IPO7O95373 1038 aaKnown RBP12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
SYNPO2-201ENST00000307142 ZFYVE16Q7Z3T8 1539 aa12.73□□□□□ -0.37
SYNPO2-201ENST00000307142 PDE3AQ14432 1141 aa12.73□□□□□ -0.37
SYNPO2-201ENST00000307142 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
SYNPO2-201ENST00000307142 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
SYNPO2-201ENST00000307142 ATP7AQ04656 1500 aa12.73□□□□□ -0.37
SYNPO2-201ENST00000307142 MATR3P43243 847 aaKnown RBP eCLIP12.73□□□□□ -0.37
SYNPO2-201ENST00000307142 OLFM4Q6UX06 510 aa12.73□□□□□ -0.37
SYNPO2-201ENST00000307142 CTNNA3Q9UI47 895 aa12.73□□□□□ -0.37
SYNPO2-201ENST00000307142 F6X3S4 739 aa12.72□□□□□ -0.37
SYNPO2-201ENST00000307142 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
SYNPO2-201ENST00000307142 HSP90AB2PQ58FF8 381 aa12.72□□□□□ -0.37
SYNPO2-201ENST00000307142 ZFYVE27Q5T4F4 411 aa12.72□□□□□ -0.37
SYNPO2-201ENST00000307142 CYP46A1Q9Y6A2 500 aa12.72□□□□□ -0.37
SYNPO2-201ENST00000307142 NPATQ14207 1427 aa12.72□□□□□ -0.37
SYNPO2-201ENST00000307142 NSD2O96028 1365 aa12.72□□□□□ -0.37
SYNPO2-201ENST00000307142 NEK4P51957 841 aa12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 NAP1L1P55209 391 aaKnown RBP12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 MAP3K12Q12852 859 aa12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 CCDC152Q4G0S7 254 aa12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 USP21Q9UK80 565 aa12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 CEBPZQ03701 1054 aaKnown RBP12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
SYNPO2-201ENST00000307142 IMMTQ16891 758 aaKnown RBP12.71□□□□□ -0.38
SYNPO2-201ENST00000307142 CCAR2Q8N163 923 aaKnown RBP12.71□□□□□ -0.38
SYNPO2-201ENST00000307142 EIF2AK4Q9P2K8 1649 aaKnown RBP12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 SKOR2Q2VWA4 1001 aaPredicted RBP12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 ZNF444Q8N0Y2 327 aaPredicted RBP12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 FAM98CQ17RN3 349 aaKnown RBP12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 SEC63Q9UGP8 760 aaKnown RBP12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 FAM83GA6ND36 823 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 KIF1BPQ96EK5 621 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 BOLA2Q9H3K6 86 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 NUP160Q12769 1436 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 SLC4A8Q2Y0W8 1093 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 NIP7Q9Y221 180 aaKnown RBP eCLIP12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 CCDC96Q2M329 555 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 DISP3Q9P2K9 1392 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 FEZ1Q99689 392 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 TRPM2O94759 1503 aa12.7□□□□□ -0.38
SYNPO2-201ENST00000307142 ANKRD1Q15327 319 aa12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 PAF1Q8N7H5 531 aa12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 CHD1LQ86WJ1 897 aa12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 NUCB2P80303 420 aa12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 NYXQ9GZU5 481 aa12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 NAPBQ9H115 298 aa12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 SDF4Q9BRK5 362 aa12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 LRRFIP2Q9Y608 721 aaKnown RBP12.69□□□□□ -0.38
SYNPO2-201ENST00000307142 RPRD2Q5VT52 1461 aaKnown RBP12.68□□□□□ -0.38
SYNPO2-201ENST00000307142 GCP02774 474 aa12.68□□□□□ -0.38
SYNPO2-201ENST00000307142 OFD1O75665 1012 aa12.68□□□□□ -0.38
SYNPO2-201ENST00000307142 UBE3BQ7Z3V4 1068 aa12.68□□□□□ -0.38
SYNPO2-201ENST00000307142 NLRP3Q96P20 1036 aa12.68□□□□□ -0.38
SYNPO2-201ENST00000307142 F8W031 263 aaPredicted RBP12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 GOLGA6L1Q8N7Z2 621 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 CCDC8Q9H0W5 538 aaPredicted RBP12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 ZRANB1Q9UGI0 708 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 HDAC9Q9UKV0 1011 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 ZNF396Q96N95 335 aaPredicted RBP12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 ABCC11Q96J66 1382 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 MAST1Q9Y2H9 1570 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 ANKRD18AQ8IVF6 992 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 RANBP6O60518 1105 aaKnown RBP12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 NFATC2IPQ8NCF5 419 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 SLAIN2Q9P270 581 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 GNPATO15228 680 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 CDKL5O76039 1030 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 TNIP1Q15025 636 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 AKAP4Q5JQC9 854 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 DZIP3Q86Y13 1208 aaKnown RBP12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms