RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 ATG3Q9NT62 314 aa21.07■□□□□ 0.96
SCAND1-201ENST00000305978 MAP3K5Q99683 1374 aa21.07■□□□□ 0.96
SCAND1-201ENST00000305978 CICQ96RK0 1608 aaPredicted RBP21.07■□□□□ 0.96
SCAND1-201ENST00000305978 MYH14Q7Z406 1995 aaKnown RBP21.06■□□□□ 0.96
SCAND1-201ENST00000305978 CHD4Q14839 1912 aa21.06■□□□□ 0.96
SCAND1-201ENST00000305978 SYT17Q9BSW7 474 aa21.06■□□□□ 0.96
SCAND1-201ENST00000305978 TJP1Q07157 1748 aa21.06■□□□□ 0.96
SCAND1-201ENST00000305978 GOLGB1Q14789 3259 aaKnown RBP21.05■□□□□ 0.96
SCAND1-201ENST00000305978 MSH5O43196 834 aa21.05■□□□□ 0.96
SCAND1-201ENST00000305978 HMOX1P09601 288 aa21.05■□□□□ 0.96
SCAND1-201ENST00000305978 POLD1P28340 1107 aa21.04■□□□□ 0.96
SCAND1-201ENST00000305978 LINC00116Q8NCU8 138 aa21.04■□□□□ 0.96
SCAND1-201ENST00000305978 FLAD1Q8NFF5 587 aa21.04■□□□□ 0.96
SCAND1-201ENST00000305978 AK7Q96M32 723 aa21.04■□□□□ 0.96
SCAND1-201ENST00000305978 CABP4P57796 275 aa21.03■□□□□ 0.96
SCAND1-201ENST00000305978 ITPK1Q13572 414 aa21.03■□□□□ 0.96
SCAND1-201ENST00000305978 MRC1P22897 1456 aa21.02■□□□□ 0.96
SCAND1-201ENST00000305978 DCAF8L1A6NGE4 600 aa21.02■□□□□ 0.96
SCAND1-201ENST00000305978 ATP6V1AP38606 617 aa21.02■□□□□ 0.96
SCAND1-201ENST00000305978 AMIGO3Q86WK7 504 aa21.02■□□□□ 0.96
SCAND1-201ENST00000305978 SIPA1L3O60292 1781 aaPredicted RBP21.02■□□□□ 0.96
SCAND1-201ENST00000305978 C4AP0C0L4 1744 aa21.01■□□□□ 0.95
SCAND1-201ENST00000305978 AKAP4Q5JQC9 854 aa21.01■□□□□ 0.95
SCAND1-201ENST00000305978 UBR2Q8IWV8 1755 aa21■□□□□ 0.95
SCAND1-201ENST00000305978 NFATC2IPQ8NCF5 419 aa20.99■□□□□ 0.95
SCAND1-201ENST00000305978 SLC4A9Q96Q91 983 aa20.99■□□□□ 0.95
SCAND1-201ENST00000305978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.98■□□□□ 0.95
SCAND1-201ENST00000305978 SSFA2P28290 1259 aa20.98■□□□□ 0.95
SCAND1-201ENST00000305978 MSL1Q68DK7 614 aa20.98■□□□□ 0.95
SCAND1-201ENST00000305978 U2SURPO15042 1029 aaKnown RBP20.97■□□□□ 0.95
SCAND1-201ENST00000305978 PHF14O94880 888 aa20.97■□□□□ 0.95
SCAND1-201ENST00000305978 MTHFSDQ2M296 383 aaKnown RBP20.97■□□□□ 0.95
SCAND1-201ENST00000305978 SMIM5Q71RC9 77 aa20.97■□□□□ 0.95
SCAND1-201ENST00000305978 RBM42Q9BTD8 480 aaKnown RBP20.97■□□□□ 0.95
SCAND1-201ENST00000305978 GNPATO15228 680 aa20.96■□□□□ 0.95
SCAND1-201ENST00000305978 PPP2R1AP30153 589 aa20.95■□□□□ 0.94
SCAND1-201ENST00000305978 KLHL34Q8N239 644 aa20.95■□□□□ 0.94
SCAND1-201ENST00000305978 CFAP53Q96M91 514 aa20.95■□□□□ 0.94
SCAND1-201ENST00000305978 LGR6Q9HBX8 967 aa20.95■□□□□ 0.94
SCAND1-201ENST00000305978 RNMTO43148 476 aaKnown RBP20.94■□□□□ 0.94
SCAND1-201ENST00000305978 SLC52A2Q9HAB3 445 aa20.94■□□□□ 0.94
SCAND1-201ENST00000305978 KIF13BQ9NQT8 1826 aa20.93■□□□□ 0.94
SCAND1-201ENST00000305978 PTCD1O75127 700 aaKnown RBP20.93■□□□□ 0.94
SCAND1-201ENST00000305978 CNTNAP4Q9C0A0 1308 aa20.93■□□□□ 0.94
SCAND1-201ENST00000305978 KCPQ6ZWJ8 1503 aa20.93■□□□□ 0.94
SCAND1-201ENST00000305978 DLG5Q8TDM6 1919 aa20.92■□□□□ 0.94
SCAND1-201ENST00000305978 RC3H1Q5TC82 1133 aaKnown RBP20.92■□□□□ 0.94
SCAND1-201ENST00000305978 NLGN2Q8NFZ4 835 aa20.9■□□□□ 0.94
SCAND1-201ENST00000305978 RTCBQ9Y3I0 505 aaKnown RBP20.9■□□□□ 0.94
SCAND1-201ENST00000305978 YY1P25490 414 aa20.89■□□□□ 0.93
SCAND1-201ENST00000305978 GAS2L2Q8NHY3 880 aa20.89■□□□□ 0.93
SCAND1-201ENST00000305978 RSPH6AQ9H0K4 717 aa20.88■□□□□ 0.93
SCAND1-201ENST00000305978 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
SCAND1-201ENST00000305978 KIAA1551Q9HCM1 1747 aa20.87■□□□□ 0.93
SCAND1-201ENST00000305978 RPS6KA4O75676 772 aa20.87■□□□□ 0.93
SCAND1-201ENST00000305978 ADRA2BP18089 450 aa20.87■□□□□ 0.93
SCAND1-201ENST00000305978 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
SCAND1-201ENST00000305978 GNAT3A8MTJ3 354 aa20.86■□□□□ 0.93
SCAND1-201ENST00000305978 PRKAR2BP31323 418 aa20.86■□□□□ 0.93
SCAND1-201ENST00000305978 CRKLP46109 303 aaKnown RBP20.86■□□□□ 0.93
SCAND1-201ENST00000305978 SLC39A6Q13433 755 aa20.85■□□□□ 0.93
SCAND1-201ENST00000305978 ARHGEF1Q92888 912 aaKnown RBP20.85■□□□□ 0.93
SCAND1-201ENST00000305978 PHACTR3Q96KR7 559 aa20.85■□□□□ 0.93
SCAND1-201ENST00000305978 CD2APQ9Y5K6 639 aa20.85■□□□□ 0.93
SCAND1-201ENST00000305978 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
SCAND1-201ENST00000305978 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
SCAND1-201ENST00000305978 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
SCAND1-201ENST00000305978 GPR162Q16538 588 aa20.84■□□□□ 0.93
SCAND1-201ENST00000305978 DNAJC10Q8IXB1 793 aa20.83■□□□□ 0.93
SCAND1-201ENST00000305978 IL17REQ8NFR9 667 aa20.83■□□□□ 0.93
SCAND1-201ENST00000305978 CEMIPQ8WUJ3 1361 aa20.83■□□□□ 0.92
SCAND1-201ENST00000305978 BRCA1P38398 1863 aaKnown RBP20.82■□□□□ 0.92
SCAND1-201ENST00000305978 FCHSD2O94868 740 aa20.82■□□□□ 0.92
SCAND1-201ENST00000305978 TEFQ10587 303 aa20.82■□□□□ 0.92
SCAND1-201ENST00000305978 RFC4P35249 363 aa20.81■□□□□ 0.92
SCAND1-201ENST00000305978 INTS5Q6P9B9 1019 aaKnown RBP20.81■□□□□ 0.92
SCAND1-201ENST00000305978 PELP1Q8IZL8 1130 aaKnown RBP20.81■□□□□ 0.92
SCAND1-201ENST00000305978 AFDNP55196 1824 aaKnown RBP20.81■□□□□ 0.92
SCAND1-201ENST00000305978 MMP10P09238 476 aa20.8■□□□□ 0.92
SCAND1-201ENST00000305978 GYS1P13807 737 aa20.8■□□□□ 0.92
SCAND1-201ENST00000305978 VSIG10Q8N0Z9 540 aa20.8■□□□□ 0.92
SCAND1-201ENST00000305978 NLGN1Q8N2Q7 840 aa20.8■□□□□ 0.92
SCAND1-201ENST00000305978 CCDC87Q9NVE4 849 aa20.8■□□□□ 0.92
SCAND1-201ENST00000305978 CYP19A1P11511 503 aaPredicted RBP20.79■□□□□ 0.92
SCAND1-201ENST00000305978 YBX3P16989 372 aaKnown RBP eCLIP20.78■□□□□ 0.92
SCAND1-201ENST00000305978 TTC5Q8N0Z6 440 aa20.78■□□□□ 0.92
SCAND1-201ENST00000305978 C10orf71Q711Q0 1435 aa20.77■□□□□ 0.91
SCAND1-201ENST00000305978 SOS1Q07889 1333 aaPredicted RBP20.77■□□□□ 0.91
SCAND1-201ENST00000305978 USP42Q9H9J4 1324 aaKnown RBP20.77■□□□□ 0.91
SCAND1-201ENST00000305978 ZNF790Q6PG37 636 aa20.76■□□□□ 0.91
SCAND1-201ENST00000305978 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
SCAND1-201ENST00000305978 KDM3BQ7LBC6 1761 aa20.76■□□□□ 0.91
SCAND1-201ENST00000305978 HEG1Q9ULI3 1381 aa20.75■□□□□ 0.91
SCAND1-201ENST00000305978 SCN7AQ01118 1682 aa20.75■□□□□ 0.91
SCAND1-201ENST00000305978 COL15A1P39059 1388 aa20.74■□□□□ 0.91
SCAND1-201ENST00000305978 GRIN3BO60391 1043 aa20.74■□□□□ 0.91
SCAND1-201ENST00000305978 DDX10Q13206 875 aaKnown RBP20.74■□□□□ 0.91
SCAND1-201ENST00000305978 ZNF496Q96IT1 587 aaPredicted RBP20.74■□□□□ 0.91
SCAND1-201ENST00000305978 NRXN2Q9P2S2 1712 aa20.74■□□□□ 0.91
SCAND1-201ENST00000305978 ZBTB1Q9Y2K1 713 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms