RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 UNC13AQ9UPW8 1703 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 EIF5P55010 431 aaKnown RBP8.91□□□□□ -0.98
SF3B3-201ENST00000302516 IKQ13123 557 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-201ENST00000302516 RTEL1-TNFRSF6BF6WH68 1400 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 FKBP15Q5T1M5 1219 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 C1orf115Q9H7X2 142 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 NAIPQ13075 1403 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 DDX12PQ92771 950 aa8.9□□□□□ -0.98
SF3B3-201ENST00000302516 BCAR3O75815 825 aa8.9□□□□□ -0.98
SF3B3-201ENST00000302516 CNNM1Q9NRU3 951 aa8.9□□□□□ -0.98
SF3B3-201ENST00000302516 GIGYF2Q6Y7W6 1299 aaKnown RBP8.9□□□□□ -0.98
SF3B3-201ENST00000302516 SNAPC4Q5SXM2 1469 aa8.9□□□□□ -0.98
SF3B3-201ENST00000302516 PLCD4Q9BRC7 762 aa8.9□□□□□ -0.98
SF3B3-201ENST00000302516 MX1P20591 662 aa8.9□□□□□ -0.98
SF3B3-201ENST00000302516 FAM193AP78312 1265 aa8.9□□□□□ -0.98
SF3B3-201ENST00000302516 SYTL4Q96C24 671 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-201ENST00000302516 NAA15Q9BXJ9 866 aaKnown RBP8.9□□□□□ -0.98
SF3B3-201ENST00000302516 ERICH4A6NGS2 130 aa8.9□□□□□ -0.98
SF3B3-201ENST00000302516 TSG101Q99816 390 aa8.9□□□□□ -0.98
SF3B3-201ENST00000302516 GLRX3O76003 335 aaKnown RBP8.9□□□□□ -0.99
SF3B3-201ENST00000302516 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.99
SF3B3-201ENST00000302516 PODXL2Q9NZ53 605 aa8.9□□□□□ -0.99
SF3B3-201ENST00000302516 TAOK3Q9H2K8 898 aa8.9□□□□□ -0.99
SF3B3-201ENST00000302516 SMC1AQ14683 1233 aaKnown RBP8.89□□□□□ -0.99
SF3B3-201ENST00000302516 KIF1BPQ96EK5 621 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 FEZ1Q99689 392 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 NLRP2Q9NX02 1062 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 TOP1P11387 765 aaKnown RBP8.89□□□□□ -0.99
SF3B3-201ENST00000302516 TSR2Q969E8 191 aaKnown RBP8.89□□□□□ -0.99
SF3B3-201ENST00000302516 ASXL1Q8IXJ9 1541 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 PTPRCP08575 1304 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 TAX1BP1Q86VP1 789 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 SLC52A1Q9NWF4 448 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 SPG7Q9UQ90 795 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 IVLP07476 585 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 LAMC3Q9Y6N6 1575 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 STK3Q13188 491 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 FAM114A1Q8IWE2 563 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 ZNF644Q9H582 1327 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-201ENST00000302516 USO1O60763 962 aaKnown RBP8.89□□□□□ -0.99
SF3B3-201ENST00000302516 NLRP6P59044 892 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 NFE2L2Q16236 605 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 HS1BP3Q53T59 392 aa8.89□□□□□ -0.99
SF3B3-201ENST00000302516 KIF20AO95235 890 aa8.88□□□□□ -0.99
SF3B3-201ENST00000302516 ABTB2Q8N961 1025 aa8.88□□□□□ -0.99
SF3B3-201ENST00000302516 MAP2K1Q02750 393 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-201ENST00000302516 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
SF3B3-201ENST00000302516 STAMBPO95630 424 aa8.88□□□□□ -0.99
SF3B3-201ENST00000302516 SKIDA1Q1XH10 827 aa8.88□□□□□ -0.99
SF3B3-201ENST00000302516 SRGAP3O43295 1099 aa8.88□□□□□ -0.99
SF3B3-201ENST00000302516 YEATS4O95619 227 aa8.88□□□□□ -0.99
SF3B3-201ENST00000302516 RAB34Q9BZG1 259 aa8.88□□□□□ -0.99
SF3B3-201ENST00000302516 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-201ENST00000302516 FAM177A1Q8N128 213 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-201ENST00000302516 CWC27Q6UX04 472 aaKnown RBP8.87□□□□□ -0.99
SF3B3-201ENST00000302516 BBXQ8WY36 941 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-201ENST00000302516 ATP2B1P20020 1258 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 SPECC1LQ69YQ0 1117 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 KANK3Q6NY19 840 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 SEC63Q9UGP8 760 aaKnown RBP8.87□□□□□ -0.99
SF3B3-201ENST00000302516 RPRD2Q5VT52 1461 aaKnown RBP8.87□□□□□ -0.99
SF3B3-201ENST00000302516 BCL11BQ9C0K0 894 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-201ENST00000302516 SCAF11Q99590 1463 aaKnown RBP8.87□□□□□ -0.99
SF3B3-201ENST00000302516 UBE2HP62256 183 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 KRI1Q8N9T8 703 aaKnown RBP8.87□□□□□ -0.99
SF3B3-201ENST00000302516 ANKRD62A6NC57 917 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 LIMCH1Q9UPQ0 1083 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 CDK13Q14004 1512 aaKnown RBP8.87□□□□□ -0.99
SF3B3-201ENST00000302516 NF2P35240 595 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 TDO2P48775 406 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 HMG20BQ9P0W2 317 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 ABCA10Q8WWZ4 1543 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 MAGI1Q96QZ7 1491 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-201ENST00000302516 BMP2KLQ5H9B9 411 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 SPATA24Q86W54 205 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 KLHL40Q2TBA0 621 aa8.87□□□□□ -0.99
SF3B3-201ENST00000302516 PRG4Q92954 1404 aaPredicted RBP8.86□□□□□ -0.99
SF3B3-201ENST00000302516 BMS1Q14692 1282 aaKnown RBP8.86□□□□□ -0.99
SF3B3-201ENST00000302516 GOLIM4O00461 696 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
SF3B3-201ENST00000302516 NBPF1Q3BBV0 1214 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 RAPGEF6Q8TEU7 1601 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 KDM5AP29375 1690 aaKnown RBP8.86□□□□□ -0.99
SF3B3-201ENST00000302516 IFFO1Q0D2I5 559 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 TNPO1Q92973 898 aaKnown RBP8.86□□□□□ -0.99
SF3B3-201ENST00000302516 PRAM1Q96QH2 718 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 KRT222Q8N1A0 295 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 TIGD1Q96MW7 591 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 MPHOSPH8Q99549 860 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 IL16Q14005 1332 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 CTR9Q6PD62 1173 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 CDK19Q9BWU1 502 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 CKAP4Q07065 602 aaKnown RBP8.86□□□□□ -0.99
SF3B3-201ENST00000302516 TMEM57Q8N5G2 664 aa8.86□□□□□ -0.99
SF3B3-201ENST00000302516 SEPT11Q9NVA2 429 aaKnown RBP8.86□□□□□ -0.99
SF3B3-201ENST00000302516 TNNT1P13805 278 aa8.85□□□□□ -0.99
SF3B3-201ENST00000302516 PAFAH1B1P43034 410 aa8.85□□□□□ -0.99
SF3B3-201ENST00000302516 CCDC175P0C221 793 aa8.85□□□□□ -0.99
SF3B3-201ENST00000302516 TNIP1Q15025 636 aa8.85□□□□□ -0.99
SF3B3-201ENST00000302516 MSH5O43196 834 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms