RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 MCM10Q7L590 875 aa11.62□□□□□ -0.55
TRIM44-201ENST00000299413 ZNF444Q8N0Y2 327 aaPredicted RBP11.62□□□□□ -0.55
TRIM44-201ENST00000299413 LARP1BQ659C4 914 aaKnown RBP11.62□□□□□ -0.55
TRIM44-201ENST00000299413 RAPGEF3O95398 923 aa11.62□□□□□ -0.55
TRIM44-201ENST00000299413 CTNNA2P26232 953 aa11.62□□□□□ -0.55
TRIM44-201ENST00000299413 IMMTQ16891 758 aaKnown RBP11.62□□□□□ -0.55
TRIM44-201ENST00000299413 LRSAM1Q6UWE0 723 aa11.62□□□□□ -0.55
TRIM44-201ENST00000299413 FAM43AQ8N2R8 423 aa11.62□□□□□ -0.55
TRIM44-201ENST00000299413 PROCA1Q8NCQ7 364 aaPredicted RBP11.62□□□□□ -0.55
TRIM44-201ENST00000299413 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
TRIM44-201ENST00000299413 CSPG5O95196 566 aa11.62□□□□□ -0.55
TRIM44-201ENST00000299413 PPP1R12BO60237 982 aaPredicted RBP11.62□□□□□ -0.55
TRIM44-201ENST00000299413 PDRG1Q9NUG6 133 aa11.62□□□□□ -0.55
TRIM44-201ENST00000299413 C11orf95C9JLR9 678 aaPredicted RBP11.61□□□□□ -0.55
TRIM44-201ENST00000299413 TAF4BQ92750 862 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 KIAA0754O94854 1291 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
TRIM44-201ENST00000299413 SYCP3Q8IZU3 236 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 TRMT112Q9UI30 125 aaKnown RBP11.61□□□□□ -0.55
TRIM44-201ENST00000299413 SYNCQ9H7C4 482 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 LEKR1Q6ZMV7 388 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 CDCA7LQ96GN5 454 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 MYO1BO43795 1136 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 SLC12A5Q9H2X9 1139 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 BOLA2Q9H3K6 86 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 RRBP1Q9P2E9 1410 aaKnown RBP11.61□□□□□ -0.55
TRIM44-201ENST00000299413 FYCO1Q9BQS8 1478 aa11.61□□□□□ -0.55
TRIM44-201ENST00000299413 PIP4K2AP48426 406 aaPredicted RBP11.61□□□□□ -0.55
TRIM44-201ENST00000299413 SRCIN1Q9C0H9 1055 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 NLRP5P59047 1200 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 AKNAD1Q5T1N1 836 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 CDKL5O76039 1030 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 BEGAINQ9BUH8 593 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 JAG2Q9Y219 1238 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 PDCP20941 246 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 CCDC91Q7Z6B0 441 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 CEP63Q96MT8 703 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 LMAN1P49257 510 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 NAPBQ9H115 298 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 TAF12Q16514 161 aa11.6□□□□□ -0.55
TRIM44-201ENST00000299413 SPATA32Q96LK8 384 aa11.59□□□□□ -0.55
TRIM44-201ENST00000299413 IQSEC3Q9UPP2 1182 aaPredicted RBP11.59□□□□□ -0.55
TRIM44-201ENST00000299413 DYDC1Q8WWB3 177 aa11.59□□□□□ -0.55
TRIM44-201ENST00000299413 PDZRN3Q9UPQ7 1066 aa11.59□□□□□ -0.55
TRIM44-201ENST00000299413 SLC5A1P13866 664 aa11.59□□□□□ -0.55
TRIM44-201ENST00000299413 HOOK3Q86VS8 718 aa11.59□□□□□ -0.55
TRIM44-201ENST00000299413 GJA3Q9Y6H8 435 aa11.59□□□□□ -0.55
TRIM44-201ENST00000299413 PRKRIP1Q9H875 184 aaPredicted RBP11.59□□□□□ -0.55
TRIM44-201ENST00000299413 DACH1Q9UI36 760 aa11.59□□□□□ -0.55
TRIM44-201ENST00000299413 SMC1AQ14683 1233 aaKnown RBP11.58□□□□□ -0.55
TRIM44-201ENST00000299413 ST5P78524 1137 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 NBPF6Q5VWK0 638 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 BLOC1S2Q6QNY1 142 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 NBPF5PQ86XG9 351 aaPredicted RBP11.58□□□□□ -0.56
TRIM44-201ENST00000299413 NBPF4Q96M43 638 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 CWC15Q9P013 229 aaKnown RBP11.58□□□□□ -0.56
TRIM44-201ENST00000299413 ERICH4A6NGS2 130 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 UQCRHP07919 91 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.56
TRIM44-201ENST00000299413 IFIT1P09914 478 aaKnown RBP11.58□□□□□ -0.56
TRIM44-201ENST00000299413 TSG101Q99816 390 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 TMCO5BA8MYB1 307 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
TRIM44-201ENST00000299413 CCP110O43303 1012 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 RSPH6AQ9H0K4 717 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 SSX2IPQ9Y2D8 614 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 INCENPQ9NQS7 918 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 SP4Q02446 784 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 PRPF4BQ13523 1007 aaKnown RBP11.58□□□□□ -0.56
TRIM44-201ENST00000299413 CADPSQ9ULU8 1353 aa11.58□□□□□ -0.56
TRIM44-201ENST00000299413 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
TRIM44-201ENST00000299413 GJC1P36383 396 aa11.57□□□□□ -0.56
TRIM44-201ENST00000299413 LARP1Q6PKG0 1096 aaKnown RBP11.57□□□□□ -0.56
TRIM44-201ENST00000299413 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
TRIM44-201ENST00000299413 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
TRIM44-201ENST00000299413 CCDC102AQ96A19 550 aa11.57□□□□□ -0.56
TRIM44-201ENST00000299413 FOXO3O43524 673 aa11.57□□□□□ -0.56
TRIM44-201ENST00000299413 CFAP45Q9UL16 551 aa11.57□□□□□ -0.56
TRIM44-201ENST00000299413 APBB1IPQ7Z5R6 666 aaPredicted RBP11.57□□□□□ -0.56
TRIM44-201ENST00000299413 PRC1O43663 620 aa11.57□□□□□ -0.56
TRIM44-201ENST00000299413 SCAPERQ9BY12 1400 aa11.57□□□□□ -0.56
TRIM44-201ENST00000299413 CHRNA2Q15822 529 aa11.57□□□□□ -0.56
TRIM44-201ENST00000299413 WAPLQ7Z5K2 1190 aa11.57□□□□□ -0.56
TRIM44-201ENST00000299413 CCT2P78371 535 aaKnown RBP11.56□□□□□ -0.56
TRIM44-201ENST00000299413 EXOC6BQ9Y2D4 811 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 GNAT3A8MTJ3 354 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 FERMT3Q86UX7 667 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 EHMT1Q9H9B1 1298 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 PICALMQ13492 652 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 ATF7IPQ6VMQ6 1270 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 CACNA2D4Q7Z3S7 1137 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 HAND2P61296 217 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 KCNA4P22459 653 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 ZNF397Q8NF99 534 aaPredicted RBP11.56□□□□□ -0.56
TRIM44-201ENST00000299413 ATP5J2-PTCD1G3V325 749 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 POLD1P28340 1107 aa11.56□□□□□ -0.56
TRIM44-201ENST00000299413 CTNNA3Q9UI47 895 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms