RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 HIP1O00291 1037 aa18.15■□□□□ 0.5
FNDC1-201ENST00000297267 TCEANC2Q96MN5 208 aa18.15■□□□□ 0.5
FNDC1-201ENST00000297267 ZNF76P36508 570 aa18.15■□□□□ 0.5
FNDC1-201ENST00000297267 ERICH3Q5RHP9 1530 aa18.15■□□□□ 0.5
FNDC1-201ENST00000297267 POLR3DP05423 398 aaPredicted RBP18.15■□□□□ 0.5
FNDC1-201ENST00000297267 UBAC1Q9BSL1 405 aa18.15■□□□□ 0.5
FNDC1-201ENST00000297267 CEBPAP49715 358 aaPredicted RBP18.15■□□□□ 0.5
FNDC1-201ENST00000297267 BCCIPQ9P287 314 aaKnown RBP eCLIP18.15■□□□□ 0.5
FNDC1-201ENST00000297267 TRIM22Q8IYM9 498 aa18.15■□□□□ 0.5
FNDC1-201ENST00000297267 WDR63Q8IWG1 891 aa18.14■□□□□ 0.5
FNDC1-201ENST00000297267 CCDC113Q9H0I3 377 aa18.14■□□□□ 0.5
FNDC1-201ENST00000297267 RARSP54136 660 aaKnown RBP18.14■□□□□ 0.49
FNDC1-201ENST00000297267 VAT1LQ9HCJ6 419 aa18.14■□□□□ 0.49
FNDC1-201ENST00000297267 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.49
FNDC1-201ENST00000297267 AEBP1Q8IUX7 1158 aa18.14■□□□□ 0.49
FNDC1-201ENST00000297267 C16orf71Q8IYS4 520 aaPredicted RBP18.14■□□□□ 0.49
FNDC1-201ENST00000297267 MX1P20591 662 aa18.14■□□□□ 0.49
FNDC1-201ENST00000297267 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
FNDC1-201ENST00000297267 C16orf45Q96MC5 204 aaPredicted RBP18.14■□□□□ 0.49
FNDC1-201ENST00000297267 MMRN2Q9H8L6 949 aa18.14■□□□□ 0.49
FNDC1-201ENST00000297267 RBM25P49756 843 aaKnown RBP18.14■□□□□ 0.49
FNDC1-201ENST00000297267 NECAB1Q8N987 351 aa18.14■□□□□ 0.49
FNDC1-201ENST00000297267 ZSWIM4Q9H7M6 989 aa18.14■□□□□ 0.49
FNDC1-201ENST00000297267 PCF11O94913 1555 aaKnown RBP18.13■□□□□ 0.49
FNDC1-201ENST00000297267 NFE2L2Q16236 605 aa18.13■□□□□ 0.49
FNDC1-201ENST00000297267 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
FNDC1-201ENST00000297267 CEP57L1Q8IYX8 460 aa18.13■□□□□ 0.49
FNDC1-201ENST00000297267 ZNHIT6Q9NWK9 470 aaKnown RBP18.13■□□□□ 0.49
FNDC1-201ENST00000297267 ZHX1Q9UKY1 873 aaPredicted RBP18.13■□□□□ 0.49
FNDC1-201ENST00000297267 RDXP35241 583 aaKnown RBP18.12■□□□□ 0.49
FNDC1-201ENST00000297267 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
FNDC1-201ENST00000297267 FAM170AA1A519 330 aa18.12■□□□□ 0.49
FNDC1-201ENST00000297267 GOPCQ9HD26 462 aa18.12■□□□□ 0.49
FNDC1-201ENST00000297267 ESPNB1AK53 854 aa18.12■□□□□ 0.49
FNDC1-201ENST00000297267 RANBP6O60518 1105 aaKnown RBP18.12■□□□□ 0.49
FNDC1-201ENST00000297267 GNL3LQ9NVN8 582 aaKnown RBP18.12■□□□□ 0.49
FNDC1-201ENST00000297267 TIAM1Q13009 1591 aa18.12■□□□□ 0.49
FNDC1-201ENST00000297267 EIF5P55010 431 aaKnown RBP18.11■□□□□ 0.49
FNDC1-201ENST00000297267 PDCP20941 246 aa18.11■□□□□ 0.49
FNDC1-201ENST00000297267 GJB2P29033 226 aa18.11■□□□□ 0.49
FNDC1-201ENST00000297267 NACAP1Q9BZK3 213 aa18.1■□□□□ 0.49
FNDC1-201ENST00000297267 MAP3K11Q16584 847 aa18.1■□□□□ 0.49
FNDC1-201ENST00000297267 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
FNDC1-201ENST00000297267 SNAPC4Q5SXM2 1469 aa18.1■□□□□ 0.49
FNDC1-201ENST00000297267 ANKIB1Q9P2G1 1089 aa18.1■□□□□ 0.49
FNDC1-201ENST00000297267 IQSEC3Q9UPP2 1182 aaPredicted RBP18.1■□□□□ 0.49
FNDC1-201ENST00000297267 MAP3K2Q9Y2U5 619 aa18.1■□□□□ 0.49
FNDC1-201ENST00000297267 SEPT7Q16181 437 aaKnown RBP18.1■□□□□ 0.49
FNDC1-201ENST00000297267 SPTY2D1Q68D10 685 aaPredicted RBP18.09■□□□□ 0.49
FNDC1-201ENST00000297267 TRIM27P14373 513 aa18.09■□□□□ 0.49
FNDC1-201ENST00000297267 PPARDQ03181 441 aa18.09■□□□□ 0.49
FNDC1-201ENST00000297267 CASQ1P31415 396 aa18.09■□□□□ 0.49
FNDC1-201ENST00000297267 MCM2P49736 904 aa18.09■□□□□ 0.49
FNDC1-201ENST00000297267 ANKRD1Q15327 319 aa18.09■□□□□ 0.49
FNDC1-201ENST00000297267 TBC1D9Q6ZT07 1266 aa18.09■□□□□ 0.49
FNDC1-201ENST00000297267 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
FNDC1-201ENST00000297267 IMMTQ16891 758 aaKnown RBP18.09■□□□□ 0.49
FNDC1-201ENST00000297267 EHBP1L1Q8N3D4 1523 aa18.09■□□□□ 0.49
FNDC1-201ENST00000297267 ADGRF5Q8IZF2 1346 aa18.09■□□□□ 0.49
FNDC1-201ENST00000297267 CLIP2Q9UDT6 1046 aa18.08■□□□□ 0.49
FNDC1-201ENST00000297267 CDR1P51861 262 aa18.08■□□□□ 0.49
FNDC1-201ENST00000297267 CHST3Q7LGC8 479 aa18.08■□□□□ 0.49
FNDC1-201ENST00000297267 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.08■□□□□ 0.48
FNDC1-201ENST00000297267 IFIT1P09914 478 aaKnown RBP18.08■□□□□ 0.48
FNDC1-201ENST00000297267 CWC15Q9P013 229 aaKnown RBP18.08■□□□□ 0.48
FNDC1-201ENST00000297267 CEP126Q9P2H0 1117 aa18.08■□□□□ 0.48
FNDC1-201ENST00000297267 DISP3Q9P2K9 1392 aa18.08■□□□□ 0.48
FNDC1-201ENST00000297267 GOLIM4O00461 696 aa18.08■□□□□ 0.48
FNDC1-201ENST00000297267 GIMAP6Q6P9H5 292 aa18.08■□□□□ 0.48
FNDC1-201ENST00000297267 URI1O94763 535 aaPredicted RBP18.07■□□□□ 0.48
FNDC1-201ENST00000297267 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
FNDC1-201ENST00000297267 PDCL2Q8N4E4 241 aa18.07■□□□□ 0.48
FNDC1-201ENST00000297267 CCDC178Q5BJE1 867 aa18.07■□□□□ 0.48
FNDC1-201ENST00000297267 ERCC4Q92889 916 aaPredicted RBP18.07■□□□□ 0.48
FNDC1-201ENST00000297267 GOLGA6L10A6NI86 522 aa18.06■□□□□ 0.48
FNDC1-201ENST00000297267 ZRANB1Q9UGI0 708 aa18.06■□□□□ 0.48
FNDC1-201ENST00000297267 EPB41L2O43491 1005 aaKnown RBP18.06■□□□□ 0.48
FNDC1-201ENST00000297267 PTPN23Q9H3S7 1636 aa18.05■□□□□ 0.48
FNDC1-201ENST00000297267 ANKRD30BQ9BXX2 1392 aa18.05■□□□□ 0.48
FNDC1-201ENST00000297267 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
FNDC1-201ENST00000297267 JAG2Q9Y219 1238 aa18.05■□□□□ 0.48
FNDC1-201ENST00000297267 RAB11FIP3O75154 756 aa18.05■□□□□ 0.48
FNDC1-201ENST00000297267 CHRNA2Q15822 529 aa18.05■□□□□ 0.48
FNDC1-201ENST00000297267 TMC6Q7Z403 805 aa18.05■□□□□ 0.48
FNDC1-201ENST00000297267 STIM1Q13586 685 aa18.05■□□□□ 0.48
FNDC1-201ENST00000297267 FOXO3O43524 673 aa18.04■□□□□ 0.48
FNDC1-201ENST00000297267 NOL7Q9UMY1 257 aaKnown RBP18.04■□□□□ 0.48
FNDC1-201ENST00000297267 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
FNDC1-201ENST00000297267 CALRP27797 417 aaKnown RBP18.04■□□□□ 0.48
FNDC1-201ENST00000297267 IGHMBP2P38935 993 aaKnown RBP18.04■□□□□ 0.48
FNDC1-201ENST00000297267 CCDC191Q8NCU4 936 aa18.04■□□□□ 0.48
FNDC1-201ENST00000297267 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.04■□□□□ 0.48
FNDC1-201ENST00000297267 V9GYY5 206 aaPredicted RBP18.04■□□□□ 0.48
FNDC1-201ENST00000297267 PSMD1Q99460 953 aa18.03■□□□□ 0.48
FNDC1-201ENST00000297267 GOLGA8BA8MQT2 603 aa18.03■□□□□ 0.48
FNDC1-201ENST00000297267 ADCY5O95622 1261 aa18.03■□□□□ 0.48
FNDC1-201ENST00000297267 MKNK2Q9HBH9 465 aa18.03■□□□□ 0.48
FNDC1-201ENST00000297267 NKTRP30414 1462 aaKnown RBP18.03■□□□□ 0.48
FNDC1-201ENST00000297267 ACSBG1Q96GR2 724 aa18.03■□□□□ 0.48
FNDC1-201ENST00000297267 CFAP45Q9UL16 551 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms