RNA–Protein interactions for RNA: ENST00000294613.9

TM2D1-201, Transcript of TM2 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM2D1, Length 1,250 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-201ENST00000294613 PPP1R1BQ9UD71 204 aaPredicted RBP23.32■■□□□ 1.32
TM2D1-201ENST00000294613 LOC102724428A0A0B4J2F2 783 aa23.31■■□□□ 1.32
TM2D1-201ENST00000294613 ERVV-2B6SEH9 535 aa23.31■■□□□ 1.32
TM2D1-201ENST00000294613 PPP2R1AP30153 589 aa23.31■■□□□ 1.32
TM2D1-201ENST00000294613 SIK1P57059 783 aa23.31■■□□□ 1.32
TM2D1-201ENST00000294613 C1orf141Q5JVX7 400 aa23.31■■□□□ 1.32
TM2D1-201ENST00000294613 GOLGB1Q14789 3259 aaKnown RBP23.3■■□□□ 1.32
TM2D1-201ENST00000294613 ITPK1Q13572 414 aa23.3■■□□□ 1.32
TM2D1-201ENST00000294613 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
TM2D1-201ENST00000294613 DLG5Q8TDM6 1919 aa23.29■■□□□ 1.32
TM2D1-201ENST00000294613 KCPQ6ZWJ8 1503 aa23.28■■□□□ 1.32
TM2D1-201ENST00000294613 SLC4A9Q96Q91 983 aa23.28■■□□□ 1.32
TM2D1-201ENST00000294613 U2SURPO15042 1029 aaKnown RBP23.27■■□□□ 1.32
TM2D1-201ENST00000294613 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.32
TM2D1-201ENST00000294613 MTHFSDQ2M296 383 aaKnown RBP23.26■■□□□ 1.31
TM2D1-201ENST00000294613 AKAP4Q5JQC9 854 aa23.26■■□□□ 1.31
TM2D1-201ENST00000294613 CABP4P57796 275 aa23.25■■□□□ 1.31
TM2D1-201ENST00000294613 SMIM5Q71RC9 77 aa23.25■■□□□ 1.31
TM2D1-201ENST00000294613 SLC16A10Q8TF71 515 aa23.25■■□□□ 1.31
TM2D1-201ENST00000294613 MAP3K5Q99683 1374 aa23.24■■□□□ 1.31
TM2D1-201ENST00000294613 AK7Q96M32 723 aa23.23■■□□□ 1.31
TM2D1-201ENST00000294613 FHDC1Q9C0D6 1143 aaPredicted RBP23.23■■□□□ 1.31
TM2D1-201ENST00000294613 ATP6V1AP38606 617 aa23.22■■□□□ 1.31
TM2D1-201ENST00000294613 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
TM2D1-201ENST00000294613 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
TM2D1-201ENST00000294613 LGR6Q9HBX8 967 aa23.22■■□□□ 1.31
TM2D1-201ENST00000294613 NFATC2IPQ8NCF5 419 aa23.21■■□□□ 1.31
TM2D1-201ENST00000294613 ARXQ96QS3 562 aa23.21■■□□□ 1.31
TM2D1-201ENST00000294613 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
TM2D1-201ENST00000294613 PHF14O94880 888 aa23.2■■□□□ 1.3
TM2D1-201ENST00000294613 MSL1Q68DK7 614 aa23.2■■□□□ 1.3
TM2D1-201ENST00000294613 SLC52A2Q9HAB3 445 aa23.2■■□□□ 1.3
TM2D1-201ENST00000294613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.19■■□□□ 1.3
TM2D1-201ENST00000294613 RBM42Q9BTD8 480 aaKnown RBP23.19■■□□□ 1.3
TM2D1-201ENST00000294613 KIF13BQ9NQT8 1826 aa23.18■■□□□ 1.3
TM2D1-201ENST00000294613 GNPATO15228 680 aa23.18■■□□□ 1.3
TM2D1-201ENST00000294613 MSH5O43196 834 aa23.18■■□□□ 1.3
TM2D1-201ENST00000294613 PRKAR2BP31323 418 aa23.18■■□□□ 1.3
TM2D1-201ENST00000294613 KIAA1551Q9HCM1 1747 aa23.17■■□□□ 1.3
TM2D1-201ENST00000294613 CNTNAP4Q9C0A0 1308 aa23.17■■□□□ 1.3
TM2D1-201ENST00000294613 SSFA2P28290 1259 aa23.17■■□□□ 1.3
TM2D1-201ENST00000294613 PHACTR3Q96KR7 559 aa23.17■■□□□ 1.3
TM2D1-201ENST00000294613 SYT17Q9BSW7 474 aa23.17■■□□□ 1.3
TM2D1-201ENST00000294613 CHD4Q14839 1912 aa23.16■■□□□ 1.3
TM2D1-201ENST00000294613 PTCD1O75127 700 aaKnown RBP23.16■■□□□ 1.3
TM2D1-201ENST00000294613 FLAD1Q8NFF5 587 aa23.15■■□□□ 1.3
TM2D1-201ENST00000294613 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.3
TM2D1-201ENST00000294613 HMGB2P26583 209 aaKnown RBP23.14■■□□□ 1.29
TM2D1-201ENST00000294613 POLD1P28340 1107 aa23.14■■□□□ 1.29
TM2D1-201ENST00000294613 GAS2L2Q8NHY3 880 aa23.14■■□□□ 1.29
TM2D1-201ENST00000294613 U2AF1L5P0DN76 240 aaPredicted RBP23.13■■□□□ 1.29
TM2D1-201ENST00000294613 U2AF1Q01081 240 aaKnown RBP eCLIP23.13■■□□□ 1.29
TM2D1-201ENST00000294613 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
TM2D1-201ENST00000294613 DDX10Q13206 875 aaKnown RBP23.12■■□□□ 1.29
TM2D1-201ENST00000294613 SLC39A6Q13433 755 aa23.12■■□□□ 1.29
TM2D1-201ENST00000294613 IL17REQ8NFR9 667 aa23.11■■□□□ 1.29
TM2D1-201ENST00000294613 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
TM2D1-201ENST00000294613 SCN7AQ01118 1682 aa23.1■■□□□ 1.29
TM2D1-201ENST00000294613 GNAT3A8MTJ3 354 aa23.1■■□□□ 1.29
TM2D1-201ENST00000294613 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
TM2D1-201ENST00000294613 CRKLP46109 303 aaKnown RBP23.09■■□□□ 1.29
TM2D1-201ENST00000294613 RC3H1Q5TC82 1133 aaKnown RBP23.09■■□□□ 1.29
TM2D1-201ENST00000294613 KLHL34Q8N239 644 aa23.09■■□□□ 1.29
TM2D1-201ENST00000294613 NLGN2Q8NFZ4 835 aa23.09■■□□□ 1.29
TM2D1-201ENST00000294613 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
TM2D1-201ENST00000294613 FCHSD2O94868 740 aa23.07■■□□□ 1.28
TM2D1-201ENST00000294613 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
TM2D1-201ENST00000294613 N4BP2Q86UW6 1770 aaPredicted RBP23.06■■□□□ 1.28
TM2D1-201ENST00000294613 DNAJC10Q8IXB1 793 aa23.06■■□□□ 1.28
TM2D1-201ENST00000294613 BCORQ6W2J9 1755 aa23.06■■□□□ 1.28
TM2D1-201ENST00000294613 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
TM2D1-201ENST00000294613 RPS6KA4O75676 772 aa23.05■■□□□ 1.28
TM2D1-201ENST00000294613 ADRA2BP18089 450 aa23.04■■□□□ 1.28
TM2D1-201ENST00000294613 INTS5Q6P9B9 1019 aaKnown RBP23.04■■□□□ 1.28
TM2D1-201ENST00000294613 TEFQ10587 303 aa23.03■■□□□ 1.28
TM2D1-201ENST00000294613 RALBP1Q15311 655 aa23.03■■□□□ 1.28
TM2D1-201ENST00000294613 ARHGEF1Q92888 912 aaKnown RBP23.03■■□□□ 1.28
TM2D1-201ENST00000294613 CYP19A1P11511 503 aaPredicted RBP23.02■■□□□ 1.28
TM2D1-201ENST00000294613 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
TM2D1-201ENST00000294613 NRXN2Q9P2S2 1712 aa23.02■■□□□ 1.28
TM2D1-201ENST00000294613 HEG1Q9ULI3 1381 aa23.01■■□□□ 1.27
TM2D1-201ENST00000294613 PLEKHF1Q96S99 279 aa23.01■■□□□ 1.27
TM2D1-201ENST00000294613 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
TM2D1-201ENST00000294613 SOS1Q07889 1333 aaPredicted RBP23.01■■□□□ 1.27
TM2D1-201ENST00000294613 C10orf71Q711Q0 1435 aa23■■□□□ 1.27
TM2D1-201ENST00000294613 GYS1P13807 737 aa23■■□□□ 1.27
TM2D1-201ENST00000294613 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
TM2D1-201ENST00000294613 ZNF790Q6PG37 636 aa23■■□□□ 1.27
TM2D1-201ENST00000294613 MCM10Q7L590 875 aa23■■□□□ 1.27
TM2D1-201ENST00000294613 ZNF496Q96IT1 587 aaPredicted RBP23■■□□□ 1.27
TM2D1-201ENST00000294613 COL15A1P39059 1388 aa23■■□□□ 1.27
TM2D1-201ENST00000294613 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
TM2D1-201ENST00000294613 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
TM2D1-201ENST00000294613 SRP68Q9UHB9 627 aaKnown RBP22.99■■□□□ 1.27
TM2D1-201ENST00000294613 ZBTB1Q9Y2K1 713 aa22.99■■□□□ 1.27
TM2D1-201ENST00000294613 USP42Q9H9J4 1324 aaKnown RBP22.99■■□□□ 1.27
TM2D1-201ENST00000294613 KCNQ3O43525 872 aa22.98■■□□□ 1.27
TM2D1-201ENST00000294613 MMP10P09238 476 aa22.98■■□□□ 1.27
TM2D1-201ENST00000294613 TTC5Q8N0Z6 440 aa22.98■■□□□ 1.27
TM2D1-201ENST00000294613 PXDNLA1KZ92 1463 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms