RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 MPRIPQ6WCQ1 1025 aa19.52■□□□□ 0.71
NCKIPSD-201ENST00000294129 SNX21Q969T3 373 aa19.52■□□□□ 0.71
NCKIPSD-201ENST00000294129 HTATSF1O43719 755 aaKnown RBP19.51■□□□□ 0.71
NCKIPSD-201ENST00000294129 IP6K1Q92551 441 aa19.51■□□□□ 0.71
NCKIPSD-201ENST00000294129 K7ELQ4 463 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-201ENST00000294129 NWD1Q149M9 1564 aa19.5■□□□□ 0.71
NCKIPSD-201ENST00000294129 ZNF530Q6P9A1 599 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-201ENST00000294129 CASC1Q6TDU7 716 aa19.5■□□□□ 0.71
NCKIPSD-201ENST00000294129 MARF1Q9Y4F3 1742 aaKnown RBP19.49■□□□□ 0.71
NCKIPSD-201ENST00000294129 TEFQ10587 303 aa19.48■□□□□ 0.71
NCKIPSD-201ENST00000294129 GNAI3P08754 354 aa19.48■□□□□ 0.71
NCKIPSD-201ENST00000294129 PDE1AP54750 535 aa19.48■□□□□ 0.71
NCKIPSD-201ENST00000294129 TNPO1Q92973 898 aaKnown RBP19.48■□□□□ 0.71
NCKIPSD-201ENST00000294129 IL1RAPL2Q9NP60 686 aa19.48■□□□□ 0.71
NCKIPSD-201ENST00000294129 LTN1O94822 1766 aa19.47■□□□□ 0.71
NCKIPSD-201ENST00000294129 TRAK2O60296 914 aa19.47■□□□□ 0.71
NCKIPSD-201ENST00000294129 TRIM6-TRIM34B2RNG4 842 aa19.47■□□□□ 0.71
NCKIPSD-201ENST00000294129 UBTFL1P0CB47 393 aaPredicted RBP19.47■□□□□ 0.71
NCKIPSD-201ENST00000294129 RILPL2Q969X0 211 aa19.47■□□□□ 0.71
NCKIPSD-201ENST00000294129 USP26Q9BXU7 913 aa19.47■□□□□ 0.71
NCKIPSD-201ENST00000294129 CHPF2Q9P2E5 772 aa19.47■□□□□ 0.71
NCKIPSD-201ENST00000294129 LRRCC1Q9C099 1032 aa19.47■□□□□ 0.71
NCKIPSD-201ENST00000294129 GCP02774 474 aa19.45■□□□□ 0.7
NCKIPSD-201ENST00000294129 USP44Q9H0E7 712 aa19.45■□□□□ 0.7
NCKIPSD-201ENST00000294129 BTBD11A6QL63 1104 aa19.45■□□□□ 0.7
NCKIPSD-201ENST00000294129 KCNH5Q8NCM2 988 aa19.44■□□□□ 0.7
NCKIPSD-201ENST00000294129 AK9Q5TCS8 1911 aa19.44■□□□□ 0.7
NCKIPSD-201ENST00000294129 ZC3H6P61129 1189 aaKnown RBP19.44■□□□□ 0.7
NCKIPSD-201ENST00000294129 CHD2O14647 1828 aaKnown RBP19.43■□□□□ 0.7
NCKIPSD-201ENST00000294129 ATP8B2P98198 1209 aa19.43■□□□□ 0.7
NCKIPSD-201ENST00000294129 PI4KAP2A4QPH2 592 aa19.43■□□□□ 0.7
NCKIPSD-201ENST00000294129 EIF4A1P60842 406 aaKnown RBP19.43■□□□□ 0.7
NCKIPSD-201ENST00000294129 PI4KAP1Q8N8J0 262 aa19.43■□□□□ 0.7
NCKIPSD-201ENST00000294129 NCOA3Q9Y6Q9 1424 aa19.43■□□□□ 0.7
NCKIPSD-201ENST00000294129 MAP4K4O95819 1239 aaPredicted RBP19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 MX1P20591 662 aa19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 SSFA2P28290 1259 aa19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 DDIT3P35638 169 aa19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 NUTM1Q86Y26 1132 aa19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 RGPD2P0DJD1 1756 aa19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 RABEP1Q15276 862 aa19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 C1orf141Q5JVX7 400 aa19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 PROSER2Q86WR7 435 aaPredicted RBP19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 ANKRD24Q8TF21 1146 aa19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 ADGRL3Q9HAR2 1447 aa19.42■□□□□ 0.7
NCKIPSD-201ENST00000294129 ERC2O15083 957 aa19.41■□□□□ 0.7
NCKIPSD-201ENST00000294129 DDX17Q92841 729 aaKnown RBP19.41■□□□□ 0.7
NCKIPSD-201ENST00000294129 SRCIN1Q9C0H9 1055 aa19.41■□□□□ 0.7
NCKIPSD-201ENST00000294129 FAM208AQ9UK61 1670 aaKnown RBP19.41■□□□□ 0.7
NCKIPSD-201ENST00000294129 SURF6O75683 361 aaKnown RBP19.41■□□□□ 0.7
NCKIPSD-201ENST00000294129 NBPF7P0C2Y1 421 aaPredicted RBP19.41■□□□□ 0.7
NCKIPSD-201ENST00000294129 REC8O95072 547 aa19.41■□□□□ 0.7
NCKIPSD-201ENST00000294129 PLEKHO1Q53GL0 409 aaPredicted RBP19.41■□□□□ 0.7
NCKIPSD-201ENST00000294129 AXIN2Q9Y2T1 843 aa19.41■□□□□ 0.7
NCKIPSD-201ENST00000294129 LRRC37A3O60309 1634 aa19.4■□□□□ 0.7
NCKIPSD-201ENST00000294129 PRAMEF22A3QJZ6 481 aa19.4■□□□□ 0.7
NCKIPSD-201ENST00000294129 NOL8Q76FK4 1167 aaKnown RBP19.4■□□□□ 0.7
NCKIPSD-201ENST00000294129 PPP1R42Q7Z4L9 355 aa19.4■□□□□ 0.7
NCKIPSD-201ENST00000294129 DDX11L8A8MPP1 907 aa19.4■□□□□ 0.7
NCKIPSD-201ENST00000294129 SRGAP3O43295 1099 aa19.39■□□□□ 0.69
NCKIPSD-201ENST00000294129 RAB3GAP1Q15042 981 aa19.39■□□□□ 0.69
NCKIPSD-201ENST00000294129 GBP4Q96PP9 640 aa19.39■□□□□ 0.69
NCKIPSD-201ENST00000294129 UNC5CLQ8IV45 518 aa19.38■□□□□ 0.69
NCKIPSD-201ENST00000294129 NFAT5O94916 1531 aa19.38■□□□□ 0.69
NCKIPSD-201ENST00000294129 GOLGA6L3A6NEY3 463 aa19.38■□□□□ 0.69
NCKIPSD-201ENST00000294129 AKAP4Q5JQC9 854 aa19.38■□□□□ 0.69
NCKIPSD-201ENST00000294129 KRT28Q7Z3Y7 464 aa19.38■□□□□ 0.69
NCKIPSD-201ENST00000294129 ANO2Q9NQ90 1003 aa19.38■□□□□ 0.69
NCKIPSD-201ENST00000294129 CEMIPQ8WUJ3 1361 aa19.38■□□□□ 0.69
NCKIPSD-201ENST00000294129 ARHGEF25Q86VW2 580 aa19.38■□□□□ 0.69
NCKIPSD-201ENST00000294129 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
NCKIPSD-201ENST00000294129 CIZ1Q9ULV3 898 aaPredicted RBP19.37■□□□□ 0.69
NCKIPSD-201ENST00000294129 IBTKQ9P2D0 1353 aaPredicted RBP19.37■□□□□ 0.69
NCKIPSD-201ENST00000294129 NPHP4O75161 1426 aaPredicted RBP19.37■□□□□ 0.69
NCKIPSD-201ENST00000294129 PROSER3Q2NL68 480 aa19.36■□□□□ 0.69
NCKIPSD-201ENST00000294129 AIMP1Q12904 312 aaKnown RBP19.36■□□□□ 0.69
NCKIPSD-201ENST00000294129 OSBPL3Q9H4L5 887 aa19.36■□□□□ 0.69
NCKIPSD-201ENST00000294129 BABAM1Q9NWV8 329 aa19.36■□□□□ 0.69
NCKIPSD-201ENST00000294129 PXDNQ92626 1479 aa19.36■□□□□ 0.69
NCKIPSD-201ENST00000294129 RNMTO43148 476 aaKnown RBP19.35■□□□□ 0.69
NCKIPSD-201ENST00000294129 ST18O60284 1047 aa19.35■□□□□ 0.69
NCKIPSD-201ENST00000294129 OS9Q13438 667 aaPredicted RBP19.35■□□□□ 0.69
NCKIPSD-201ENST00000294129 PKP1Q13835 747 aa19.35■□□□□ 0.69
NCKIPSD-201ENST00000294129 FOXD4L5Q5VV16 416 aaPredicted RBP19.35■□□□□ 0.69
NCKIPSD-201ENST00000294129 ZGPATQ8N5A5 531 aaKnown RBP19.35■□□□□ 0.69
NCKIPSD-201ENST00000294129 FOXD4L4Q8WXT5 416 aaPredicted RBP19.35■□□□□ 0.69
NCKIPSD-201ENST00000294129 PANK2Q9BZ23 570 aa19.35■□□□□ 0.69
NCKIPSD-201ENST00000294129 EIF5BO60841 1220 aaKnown RBP19.34■□□□□ 0.69
NCKIPSD-201ENST00000294129 NEK4P51957 841 aa19.34■□□□□ 0.69
NCKIPSD-201ENST00000294129 L1TD1Q5T7N2 865 aaKnown RBP19.34■□□□□ 0.69
NCKIPSD-201ENST00000294129 SOS1Q07889 1333 aaPredicted RBP19.34■□□□□ 0.69
NCKIPSD-201ENST00000294129 ESYT1Q9BSJ8 1104 aa19.34■□□□□ 0.69
NCKIPSD-201ENST00000294129 NLRP2Q9NX02 1062 aa19.34■□□□□ 0.69
NCKIPSD-201ENST00000294129 CACNA1FO60840 1977 aa19.33■□□□□ 0.69
NCKIPSD-201ENST00000294129 CABLES1Q8TDN4 633 aa19.33■□□□□ 0.69
NCKIPSD-201ENST00000294129 SALL3Q9BXA9 1300 aa19.33■□□□□ 0.68
NCKIPSD-201ENST00000294129 SLC39A6Q13433 755 aa19.33■□□□□ 0.68
NCKIPSD-201ENST00000294129 MAP3K2Q9Y2U5 619 aa19.33■□□□□ 0.68
NCKIPSD-201ENST00000294129 CWF19L2Q2TBE0 894 aaKnown RBP19.32■□□□□ 0.68
NCKIPSD-201ENST00000294129 BEND3Q5T5X7 828 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms