RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CCAR1Q8IX12 1150 aaKnown RBP17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 USHBP1Q8N6Y0 703 aa17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 CCDC8Q9H0W5 538 aaPredicted RBP17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 TNNQ9UQP3 1299 aa17.98■□□□□ 0.47
SHROOM4-201ENST00000289292 EMILIN1Q9Y6C2 1016 aa17.98■□□□□ 0.47
SHROOM4-201ENST00000289292 GOLGA6L10A6NI86 522 aa17.98■□□□□ 0.47
SHROOM4-201ENST00000289292 ATP2B2Q01814 1243 aa17.98■□□□□ 0.47
SHROOM4-201ENST00000289292 GNAT3A8MTJ3 354 aa17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 KLHL10Q6JEL2 608 aa17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 KIF1BPQ96EK5 621 aa17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 ZFP91Q96JP5 570 aaPredicted RBP17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 SNAPC4Q5SXM2 1469 aa17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 CCDC57Q2TAC2 916 aa17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 KIAA1328Q86T90 577 aa17.97■□□□□ 0.47
SHROOM4-201ENST00000289292 TATP17735 454 aaPredicted RBP17.96■□□□□ 0.47
SHROOM4-201ENST00000289292 SFPQP23246 707 aaKnown RBP eCLIP17.96■□□□□ 0.47
SHROOM4-201ENST00000289292 ISM2Q6H9L7 571 aa17.96■□□□□ 0.47
SHROOM4-201ENST00000289292 NME9Q86XW9 330 aa17.96■□□□□ 0.47
SHROOM4-201ENST00000289292 ZNF692Q9BU19 519 aaPredicted RBP17.96■□□□□ 0.47
SHROOM4-201ENST00000289292 MYO6Q9UM54 1294 aa17.96■□□□□ 0.47
SHROOM4-201ENST00000289292 RAB11FIP3O75154 756 aa17.96■□□□□ 0.47
SHROOM4-201ENST00000289292 CCT2P78371 535 aaKnown RBP17.96■□□□□ 0.47
SHROOM4-201ENST00000289292 GIMAP6Q6P9H5 292 aa17.96■□□□□ 0.47
SHROOM4-201ENST00000289292 BIN1O00499 593 aa17.96■□□□□ 0.46
SHROOM4-201ENST00000289292 KRT32Q14532 448 aa17.95■□□□□ 0.46
SHROOM4-201ENST00000289292 ATAD2Q6PL18 1390 aa17.95■□□□□ 0.46
SHROOM4-201ENST00000289292 FAM83GA6ND36 823 aa17.95■□□□□ 0.46
SHROOM4-201ENST00000289292 TDO2P48775 406 aa17.95■□□□□ 0.46
SHROOM4-201ENST00000289292 STIM1Q13586 685 aa17.95■□□□□ 0.46
SHROOM4-201ENST00000289292 SLC3A2P08195 630 aaKnown RBP17.95■□□□□ 0.46
SHROOM4-201ENST00000289292 ARHGAP29Q52LW3 1261 aa17.95■□□□□ 0.46
SHROOM4-201ENST00000289292 KIF18AQ8NI77 898 aa17.95■□□□□ 0.46
SHROOM4-201ENST00000289292 TAX1BP1Q86VP1 789 aa17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 ANO10Q9NW15 660 aa17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 LIMCH1Q9UPQ0 1083 aa17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 RPRD2Q5VT52 1461 aaKnown RBP17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 IDH1O75874 414 aaKnown RBP17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 HCLS1P14317 486 aaPredicted RBP17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 CPLX3Q8WVH0 158 aa17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 DHX8Q14562 1220 aaKnown RBP17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 TTC22Q5TAA0 569 aa17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 ADGRF5Q8IZF2 1346 aa17.94■□□□□ 0.46
SHROOM4-201ENST00000289292 GTF2F1P35269 517 aaKnown RBP eCLIP17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 SEPT11Q9NVA2 429 aaKnown RBP17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 FBLN1P23142 703 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 NUDT16Q96DE0 195 aaKnown RBP17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 SEC24BO95487 1268 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 NACAP1Q9BZK3 213 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 STX6O43752 255 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 GLRX3O76003 335 aaKnown RBP17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 CDKL5O76039 1030 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 IMMTQ16891 758 aaKnown RBP17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 TMC6Q7Z403 805 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 OSCARQ8IYS5 282 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 KLHL40Q2TBA0 621 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 BMP2KLQ5H9B9 411 aa17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 NOL7Q9UMY1 257 aaKnown RBP17.93■□□□□ 0.46
SHROOM4-201ENST00000289292 SSBP05455 408 aaKnown RBP eCLIP17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 CNPY2Q9Y2B0 182 aa17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 EIF5P55010 431 aaKnown RBP17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 NUCB1Q02818 461 aa17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 RAB11FIP4Q86YS3 637 aa17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 SYCP1Q15431 976 aa17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 TAF7Q15545 349 aaPredicted RBP17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 CCDC82Q8N4S0 544 aa17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 PLEKHH1Q9ULM0 1364 aa17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 MYD88Q99836 296 aa17.92■□□□□ 0.46
SHROOM4-201ENST00000289292 LRSAM1Q6UWE0 723 aa17.91■□□□□ 0.46
SHROOM4-201ENST00000289292 RAPGEF3O95398 923 aa17.91■□□□□ 0.46
SHROOM4-201ENST00000289292 TOP1P11387 765 aaKnown RBP17.91■□□□□ 0.46
SHROOM4-201ENST00000289292 ZBTB9Q96C00 473 aa17.91■□□□□ 0.46
SHROOM4-201ENST00000289292 FSIP1Q8NA03 581 aa17.91■□□□□ 0.46
SHROOM4-201ENST00000289292 UBAC1Q9BSL1 405 aa17.91■□□□□ 0.46
SHROOM4-201ENST00000289292 SCAND2PQ9GZW5 306 aaPredicted RBP17.9■□□□□ 0.46
SHROOM4-201ENST00000289292 FAM135AQ9P2D6 1515 aa17.9■□□□□ 0.46
SHROOM4-201ENST00000289292 MBIPQ9NS73 344 aa17.9■□□□□ 0.46
SHROOM4-201ENST00000289292 ERLIN2O94905 339 aa17.9■□□□□ 0.46
SHROOM4-201ENST00000289292 DNA2P51530 1060 aa17.9■□□□□ 0.46
SHROOM4-201ENST00000289292 ENOX2Q16206 610 aaKnown RBP17.9■□□□□ 0.46
SHROOM4-201ENST00000289292 TMX3Q96JJ7 454 aa17.9■□□□□ 0.46
SHROOM4-201ENST00000289292 CTNNA3Q9UI47 895 aa17.9■□□□□ 0.46
SHROOM4-201ENST00000289292 CLCN1P35523 988 aa17.89■□□□□ 0.46
SHROOM4-201ENST00000289292 C16orf71Q8IYS4 520 aaPredicted RBP17.89■□□□□ 0.46
SHROOM4-201ENST00000289292 CCDC148Q8NFR7 591 aa17.89■□□□□ 0.46
SHROOM4-201ENST00000289292 RAI14Q9P0K7 980 aa17.89■□□□□ 0.46
SHROOM4-201ENST00000289292 CCDC141Q6ZP82 1450 aa17.89■□□□□ 0.46
SHROOM4-201ENST00000289292 NECAB1Q8N987 351 aa17.89■□□□□ 0.45
SHROOM4-201ENST00000289292 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
SHROOM4-201ENST00000289292 NEFHP12036 1026 aa17.89■□□□□ 0.45
SHROOM4-201ENST00000289292 DYNC1I1O14576 645 aa17.89■□□□□ 0.45
SHROOM4-201ENST00000289292 ZSCAN25Q6NSZ9 544 aa17.89■□□□□ 0.45
SHROOM4-201ENST00000289292 CEP126Q9P2H0 1117 aa17.89■□□□□ 0.45
SHROOM4-201ENST00000289292 CEP135Q66GS9 1140 aa17.88■□□□□ 0.45
SHROOM4-201ENST00000289292 CCDC144CPQ8IYA2 1237 aa17.88■□□□□ 0.45
SHROOM4-201ENST00000289292 GPATCH11Q8N954 259 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms