RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 MCM10Q7L590 875 aa26.32■■□□□ 1.8
TIMP4-201ENST00000287814 LY75O60449 1722 aa26.32■■□□□ 1.8
TIMP4-201ENST00000287814 MRC1P22897 1456 aa26.32■■□□□ 1.8
TIMP4-201ENST00000287814 SLC27A3Q5K4L6 730 aa26.31■■□□□ 1.8
TIMP4-201ENST00000287814 CCNL1Q9UK58 526 aaPredicted RBP26.31■■□□□ 1.8
TIMP4-201ENST00000287814 CEMIPQ8WUJ3 1361 aa26.31■■□□□ 1.8
TIMP4-201ENST00000287814 RUNDC1Q96C34 613 aa26.31■■□□□ 1.8
TIMP4-201ENST00000287814 VIRMAQ69YN4 1812 aaKnown RBP26.29■■□□□ 1.8
TIMP4-201ENST00000287814 PSDA5PKW4 1024 aaPredicted RBP26.29■■□□□ 1.8
TIMP4-201ENST00000287814 RTF1Q92541 710 aaKnown RBP26.29■■□□□ 1.8
TIMP4-201ENST00000287814 HTATSF1O43719 755 aaKnown RBP26.28■■□□□ 1.8
TIMP4-201ENST00000287814 R3HDM1Q15032 1099 aaKnown RBP26.28■■□□□ 1.8
TIMP4-201ENST00000287814 LOC102724428A0A0B4J2F2 783 aa26.28■■□□□ 1.8
TIMP4-201ENST00000287814 TMPOP42166 694 aaKnown RBP26.28■■□□□ 1.8
TIMP4-201ENST00000287814 SIK1P57059 783 aa26.28■■□□□ 1.8
TIMP4-201ENST00000287814 SLC39A6Q13433 755 aa26.28■■□□□ 1.8
TIMP4-201ENST00000287814 NBPF14Q5TI25 921 aa26.28■■□□□ 1.8
TIMP4-201ENST00000287814 DIEXFQ68CQ4 756 aaKnown RBP26.28■■□□□ 1.8
TIMP4-201ENST00000287814 SLC4A9Q96Q91 983 aa26.28■■□□□ 1.8
TIMP4-201ENST00000287814 RRP7AQ9Y3A4 280 aaKnown RBP26.28■■□□□ 1.8
TIMP4-201ENST00000287814 TEFQ10587 303 aa26.27■■□□□ 1.8
TIMP4-201ENST00000287814 RIPK4P57078 832 aa26.25■■□□□ 1.79
TIMP4-201ENST00000287814 PAPPAQ13219 1627 aa26.25■■□□□ 1.79
TIMP4-201ENST00000287814 DLG5Q8TDM6 1919 aa26.25■■□□□ 1.79
TIMP4-201ENST00000287814 ZNF827Q17R98 1081 aa26.25■■□□□ 1.79
TIMP4-201ENST00000287814 RBM42Q9BTD8 480 aaKnown RBP26.25■■□□□ 1.79
TIMP4-201ENST00000287814 THUMPD2Q9BTF0 503 aaKnown RBP26.25■■□□□ 1.79
TIMP4-201ENST00000287814 PTCD1O75127 700 aaKnown RBP26.24■■□□□ 1.79
TIMP4-201ENST00000287814 ITPK1Q13572 414 aa26.24■■□□□ 1.79
TIMP4-201ENST00000287814 NEUROD2Q15784 382 aa26.24■■□□□ 1.79
TIMP4-201ENST00000287814 SLC15A2Q16348 729 aa26.23■■□□□ 1.79
TIMP4-201ENST00000287814 AKT1S1Q96B36 256 aa26.22■■□□□ 1.79
TIMP4-201ENST00000287814 APAF1O14727 1248 aa26.22■■□□□ 1.79
TIMP4-201ENST00000287814 ATP6V1AP38606 617 aa26.22■■□□□ 1.79
TIMP4-201ENST00000287814 STK32BQ9NY57 414 aa26.22■■□□□ 1.79
TIMP4-201ENST00000287814 SIPA1L3O60292 1781 aaPredicted RBP26.2■■□□□ 1.78
TIMP4-201ENST00000287814 KCNQ3O43525 872 aa26.19■■□□□ 1.78
TIMP4-201ENST00000287814 LINC00116Q8NCU8 138 aa26.19■■□□□ 1.78
TIMP4-201ENST00000287814 TRIM35Q9UPQ4 493 aa26.19■■□□□ 1.78
TIMP4-201ENST00000287814 PDGFDQ9GZP0 370 aaPredicted RBP26.19■■□□□ 1.78
TIMP4-201ENST00000287814 SENP3-EIF4A1A0A087X0R7 540 aa26.18■■□□□ 1.78
TIMP4-201ENST00000287814 BTBD11A6QL63 1104 aa26.18■■□□□ 1.78
TIMP4-201ENST00000287814 ZNF790Q6PG37 636 aa26.18■■□□□ 1.78
TIMP4-201ENST00000287814 FAM9BQ8IZU0 186 aa26.18■■□□□ 1.78
TIMP4-201ENST00000287814 MIS18AQ9NYP9 233 aa26.17■■□□□ 1.78
TIMP4-201ENST00000287814 KCPQ6ZWJ8 1503 aa26.17■■□□□ 1.78
TIMP4-201ENST00000287814 TAF7Q15545 349 aaPredicted RBP26.16■■□□□ 1.78
TIMP4-201ENST00000287814 MIER1Q8N108 512 aa26.16■■□□□ 1.78
TIMP4-201ENST00000287814 C5P01031 1676 aa26.15■■□□□ 1.78
TIMP4-201ENST00000287814 TAF1LQ8IZX4 1826 aa26.15■■□□□ 1.78
TIMP4-201ENST00000287814 ZNF496Q96IT1 587 aaPredicted RBP26.15■■□□□ 1.78
TIMP4-201ENST00000287814 TTC5Q8N0Z6 440 aa26.14■■□□□ 1.78
TIMP4-201ENST00000287814 SRCAPQ6ZRS2 3230 aa26.13■■□□□ 1.77
TIMP4-201ENST00000287814 LMOD3Q0VAK6 560 aa26.13■■□□□ 1.77
TIMP4-201ENST00000287814 AMIGO3Q86WK7 504 aa26.13■■□□□ 1.77
TIMP4-201ENST00000287814 TFCP2L1Q9NZI6 479 aa26.13■■□□□ 1.77
TIMP4-201ENST00000287814 CCER2I3L3R5 266 aa26.12■■□□□ 1.77
TIMP4-201ENST00000287814 SMIM5Q71RC9 77 aa26.12■■□□□ 1.77
TIMP4-201ENST00000287814 ZNF831Q5JPB2 1677 aa26.12■■□□□ 1.77
TIMP4-201ENST00000287814 C4BP0C0L5 1744 aa26.12■■□□□ 1.77
TIMP4-201ENST00000287814 DNAJC10Q8IXB1 793 aa26.12■■□□□ 1.77
TIMP4-201ENST00000287814 UBR2Q8IWV8 1755 aa26.11■■□□□ 1.77
TIMP4-201ENST00000287814 PNPLA7Q6ZV29 1317 aa26.11■■□□□ 1.77
TIMP4-201ENST00000287814 TJP1Q07157 1748 aa26.09■■□□□ 1.77
TIMP4-201ENST00000287814 VSIG10Q8N0Z9 540 aa26.09■■□□□ 1.77
TIMP4-201ENST00000287814 AK7Q96M32 723 aa26.09■■□□□ 1.77
TIMP4-201ENST00000287814 HEG1Q9ULI3 1381 aa26.08■■□□□ 1.77
TIMP4-201ENST00000287814 HMGB2P26583 209 aaKnown RBP26.08■■□□□ 1.77
TIMP4-201ENST00000287814 FMNL2Q96PY5 1086 aa26.08■■□□□ 1.77
TIMP4-201ENST00000287814 TUBGCP6Q96RT7 1819 aa26.07■■□□□ 1.76
TIMP4-201ENST00000287814 CYP19A1P11511 503 aaPredicted RBP26.06■■□□□ 1.76
TIMP4-201ENST00000287814 COL23A1Q86Y22 540 aaPredicted RBP26.06■■□□□ 1.76
TIMP4-201ENST00000287814 COL5A3P25940 1745 aaPredicted RBP26.06■■□□□ 1.76
TIMP4-201ENST00000287814 PRAMEF22A3QJZ6 481 aa26.06■■□□□ 1.76
TIMP4-201ENST00000287814 GNPATO15228 680 aa26.06■■□□□ 1.76
TIMP4-201ENST00000287814 CRKLP46109 303 aaKnown RBP26.06■■□□□ 1.76
TIMP4-201ENST00000287814 RC3H1Q5TC82 1133 aaKnown RBP26.06■■□□□ 1.76
TIMP4-201ENST00000287814 CNTNAP4Q9C0A0 1308 aa26.05■■□□□ 1.76
TIMP4-201ENST00000287814 CICQ96RK0 1608 aaPredicted RBP26.05■■□□□ 1.76
TIMP4-201ENST00000287814 CASZ1Q86V15 1759 aa26.05■■□□□ 1.76
TIMP4-201ENST00000287814 INTS5Q6P9B9 1019 aaKnown RBP26.05■■□□□ 1.76
TIMP4-201ENST00000287814 PHF14O94880 888 aa26.03■■□□□ 1.76
TIMP4-201ENST00000287814 TSPYL4Q9UJ04 414 aa26.03■■□□□ 1.76
TIMP4-201ENST00000287814 MYH14Q7Z406 1995 aaKnown RBP26.03■■□□□ 1.76
TIMP4-201ENST00000287814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.03■■□□□ 1.76
TIMP4-201ENST00000287814 ZBTB7AO95365 584 aa26.03■■□□□ 1.76
TIMP4-201ENST00000287814 EIF4A1P60842 406 aaKnown RBP26.03■■□□□ 1.76
TIMP4-201ENST00000287814 CHL1O00533 1208 aa26.02■■□□□ 1.76
TIMP4-201ENST00000287814 SALL2Q9Y467 1007 aaPredicted RBP26.02■■□□□ 1.76
TIMP4-201ENST00000287814 LAS1LQ9Y4W2 734 aaKnown RBP26.02■■□□□ 1.76
TIMP4-201ENST00000287814 USP16Q9Y5T5 823 aa26.02■■□□□ 1.76
TIMP4-201ENST00000287814 KDM3BQ7LBC6 1761 aa26.02■■□□□ 1.76
TIMP4-201ENST00000287814 QSER1Q2KHR3 1735 aa26.01■■□□□ 1.75
TIMP4-201ENST00000287814 UBR3Q6ZT12 1888 aa26.01■■□□□ 1.75
TIMP4-201ENST00000287814 RPS6KA4O75676 772 aa26■■□□□ 1.75
TIMP4-201ENST00000287814 CCDC27Q2M243 656 aa26■■□□□ 1.75
TIMP4-201ENST00000287814 CCDC87Q9NVE4 849 aa26■■□□□ 1.75
TIMP4-201ENST00000287814 BABAM1Q9NWV8 329 aa26■■□□□ 1.75
TIMP4-201ENST00000287814 MSH5O43196 834 aa25.99■■□□□ 1.75
TIMP4-201ENST00000287814 SNRPA1P09661 255 aaKnown RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms