RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 HDGFP51858 240 aaKnown RBP16.18■□□□□ 0.18
SLC28A1-201ENST00000286749 TMX3Q96JJ7 454 aa16.17■□□□□ 0.18
SLC28A1-201ENST00000286749 ESYT1Q9BSJ8 1104 aa16.17■□□□□ 0.18
SLC28A1-201ENST00000286749 USP31Q70CQ4 1352 aa16.17■□□□□ 0.18
SLC28A1-201ENST00000286749 PLEKHG3A1L390 1219 aa16.17■□□□□ 0.18
SLC28A1-201ENST00000286749 HSP90AA2PQ14568 343 aaPredicted RBP16.17■□□□□ 0.18
SLC28A1-201ENST00000286749 FAM208AQ9UK61 1670 aaKnown RBP16.17■□□□□ 0.18
SLC28A1-201ENST00000286749 SALL3Q9BXA9 1300 aa16.17■□□□□ 0.18
SLC28A1-201ENST00000286749 MSNP26038 577 aaKnown RBP16.16■□□□□ 0.18
SLC28A1-201ENST00000286749 ESF1Q9H501 851 aaKnown RBP16.16■□□□□ 0.18
SLC28A1-201ENST00000286749 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
SLC28A1-201ENST00000286749 LRRCC1Q9C099 1032 aa16.16■□□□□ 0.18
SLC28A1-201ENST00000286749 TMEM63CQ9P1W3 806 aa16.16■□□□□ 0.18
SLC28A1-201ENST00000286749 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
SLC28A1-201ENST00000286749 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
SLC28A1-201ENST00000286749 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
SLC28A1-201ENST00000286749 UBR1Q8IWV7 1749 aa16.16■□□□□ 0.18
SLC28A1-201ENST00000286749 MX1P20591 662 aa16.15■□□□□ 0.18
SLC28A1-201ENST00000286749 PNMA6EA0A0J9YXQ4 647 aa16.15■□□□□ 0.18
SLC28A1-201ENST00000286749 NOL8Q76FK4 1167 aaKnown RBP16.15■□□□□ 0.18
SLC28A1-201ENST00000286749 TRIM6-TRIM34B2RNG4 842 aa16.15■□□□□ 0.18
SLC28A1-201ENST00000286749 RRP9O43818 475 aaKnown RBP16.15■□□□□ 0.18
SLC28A1-201ENST00000286749 NECTIN2Q92692 538 aa16.15■□□□□ 0.18
SLC28A1-201ENST00000286749 RILPL2Q969X0 211 aa16.15■□□□□ 0.18
SLC28A1-201ENST00000286749 ADAMTS13Q76LX8 1427 aa16.14■□□□□ 0.18
SLC28A1-201ENST00000286749 TMEM2Q9UHN6 1383 aa16.14■□□□□ 0.17
SLC28A1-201ENST00000286749 CEP170BQ9Y4F5 1589 aaPredicted RBP16.14■□□□□ 0.17
SLC28A1-201ENST00000286749 SYCE3A1L190 88 aa16.14■□□□□ 0.17
SLC28A1-201ENST00000286749 FKBP5Q13451 457 aaPredicted RBP16.14■□□□□ 0.17
SLC28A1-201ENST00000286749 KIAA1211Q6ZU35 1233 aa16.14■□□□□ 0.17
SLC28A1-201ENST00000286749 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
SLC28A1-201ENST00000286749 TPM2P07951 284 aa16.14■□□□□ 0.17
SLC28A1-201ENST00000286749 MCCP23508 829 aa16.14■□□□□ 0.17
SLC28A1-201ENST00000286749 FLIIQ13045 1269 aa16.14■□□□□ 0.17
SLC28A1-201ENST00000286749 TNRQ92752 1358 aa16.13■□□□□ 0.17
SLC28A1-201ENST00000286749 CHMLP26374 656 aa16.13■□□□□ 0.17
SLC28A1-201ENST00000286749 MCM2P49736 904 aa16.13■□□□□ 0.17
SLC28A1-201ENST00000286749 LRSAM1Q6UWE0 723 aa16.13■□□□□ 0.17
SLC28A1-201ENST00000286749 PDLIM2Q96JY6 352 aa16.13■□□□□ 0.17
SLC28A1-201ENST00000286749 GNAI3P08754 354 aa16.13■□□□□ 0.17
SLC28A1-201ENST00000286749 FLT4P35916 1363 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 KDRP35968 1356 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 SSH2Q76I76 1423 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 OFD1O75665 1012 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 BRD1O95696 1058 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 CUL4AQ13619 759 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 EYA1Q99502 592 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 CACNA1FO60840 1977 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 ATP8B2P98198 1209 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 HS1BP3Q53T59 392 aa16.12■□□□□ 0.17
SLC28A1-201ENST00000286749 LRRFIP2Q9Y608 721 aaKnown RBP16.11■□□□□ 0.17
SLC28A1-201ENST00000286749 N4BP2Q86UW6 1770 aaPredicted RBP16.11■□□□□ 0.17
SLC28A1-201ENST00000286749 MBD3O95983 291 aa16.11■□□□□ 0.17
SLC28A1-201ENST00000286749 CCDC30Q5VVM6 783 aa16.11■□□□□ 0.17
SLC28A1-201ENST00000286749 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
SLC28A1-201ENST00000286749 RGPD8O14715 1765 aaPredicted RBP16.1■□□□□ 0.17
SLC28A1-201ENST00000286749 AMPHP49418 695 aa16.1■□□□□ 0.17
SLC28A1-201ENST00000286749 IGSF1Q8N6C5 1336 aa16.1■□□□□ 0.17
SLC28A1-201ENST00000286749 NOL7Q9UMY1 257 aaKnown RBP16.1■□□□□ 0.17
SLC28A1-201ENST00000286749 ANAPC15P60006 121 aa16.1■□□□□ 0.17
SLC28A1-201ENST00000286749 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.1■□□□□ 0.17
SLC28A1-201ENST00000286749 UPF3BQ9BZI7 483 aaKnown RBP16.1■□□□□ 0.17
SLC28A1-201ENST00000286749 TTC21AQ8NDW8 1320 aa16.09■□□□□ 0.17
SLC28A1-201ENST00000286749 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.09■□□□□ 0.17
SLC28A1-201ENST00000286749 STAP2Q9UGK3 403 aa16.09■□□□□ 0.17
SLC28A1-201ENST00000286749 TCHHQ07283 1943 aa16.08■□□□□ 0.17
SLC28A1-201ENST00000286749 INTS4Q96HW7 963 aaKnown RBP16.08■□□□□ 0.17
SLC28A1-201ENST00000286749 FOXD4L6Q3SYB3 417 aaPredicted RBP16.08■□□□□ 0.16
SLC28A1-201ENST00000286749 GLIPR1L2Q4G1C9 344 aa16.08■□□□□ 0.16
SLC28A1-201ENST00000286749 FOXD4L3Q6VB84 417 aaPredicted RBP16.08■□□□□ 0.16
SLC28A1-201ENST00000286749 RNF214Q8ND24 703 aa16.08■□□□□ 0.16
SLC28A1-201ENST00000286749 SRCIN1Q9C0H9 1055 aa16.08■□□□□ 0.16
SLC28A1-201ENST00000286749 IL1RAPL2Q9NP60 686 aa16.08■□□□□ 0.16
SLC28A1-201ENST00000286749 LTKP29376 864 aa16.07■□□□□ 0.16
SLC28A1-201ENST00000286749 IL25Q9H293 177 aa16.07■□□□□ 0.16
SLC28A1-201ENST00000286749 PIK3C2AO00443 1686 aa16.07■□□□□ 0.16
SLC28A1-201ENST00000286749 GNAT3A8MTJ3 354 aa16.07■□□□□ 0.16
SLC28A1-201ENST00000286749 SLC26A8Q96RN1 970 aa16.07■□□□□ 0.16
SLC28A1-201ENST00000286749 PTPRUQ92729 1446 aa16.07■□□□□ 0.16
SLC28A1-201ENST00000286749 USP44Q9H0E7 712 aa16.06■□□□□ 0.16
SLC28A1-201ENST00000286749 HTATSF1O43719 755 aaKnown RBP16.06■□□□□ 0.16
SLC28A1-201ENST00000286749 ZNF500O60304 480 aaPredicted RBP16.06■□□□□ 0.16
SLC28A1-201ENST00000286749 UBTFL1P0CB47 393 aaPredicted RBP16.06■□□□□ 0.16
SLC28A1-201ENST00000286749 XPCQ01831 940 aaPredicted RBP16.06■□□□□ 0.16
SLC28A1-201ENST00000286749 NUTM1Q86Y26 1132 aa16.06■□□□□ 0.16
SLC28A1-201ENST00000286749 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
SLC28A1-201ENST00000286749 PLEKHG1Q9ULL1 1385 aa16.06■□□□□ 0.16
SLC28A1-201ENST00000286749 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
SLC28A1-201ENST00000286749 GDPD2Q9HCC8 539 aa16.05■□□□□ 0.16
SLC28A1-201ENST00000286749 ZKSCAN5Q9Y2L8 839 aa16.05■□□□□ 0.16
SLC28A1-201ENST00000286749 AOX1Q06278 1338 aa16.05■□□□□ 0.16
SLC28A1-201ENST00000286749 SOS1Q07889 1333 aaPredicted RBP16.05■□□□□ 0.16
SLC28A1-201ENST00000286749 IL17RAQ96F46 866 aa16.04■□□□□ 0.16
SLC28A1-201ENST00000286749 PXDNLA1KZ92 1463 aa16.04■□□□□ 0.16
SLC28A1-201ENST00000286749 GADD45BO75293 160 aaPredicted RBP16.04■□□□□ 0.16
SLC28A1-201ENST00000286749 IL17REQ8NFR9 667 aa16.04■□□□□ 0.16
SLC28A1-201ENST00000286749 TSPY26PQ9H489 355 aa16.04■□□□□ 0.16
SLC28A1-201ENST00000286749 R3HCC1Q9Y3T6 440 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms