RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 DBF4Q9UBU7 674 aaPredicted RBP22.84■■□□□ 1.25
LSM11-201ENST00000286307 MAP3K2Q9Y2U5 619 aa22.84■■□□□ 1.25
LSM11-201ENST00000286307 PARP3Q9Y6F1 533 aa22.84■■□□□ 1.25
LSM11-201ENST00000286307 FEZ1Q99689 392 aa22.84■■□□□ 1.25
LSM11-201ENST00000286307 STK38Q15208 465 aa22.83■■□□□ 1.25
LSM11-201ENST00000286307 SLC4A8Q2Y0W8 1093 aa22.83■■□□□ 1.25
LSM11-201ENST00000286307 UHRF1BP1Q6BDS2 1440 aa22.83■■□□□ 1.25
LSM11-201ENST00000286307 MVPQ14764 893 aaKnown RBP22.83■■□□□ 1.25
LSM11-201ENST00000286307 IMMTQ16891 758 aaKnown RBP22.83■■□□□ 1.25
LSM11-201ENST00000286307 ZNF444Q8N0Y2 327 aaPredicted RBP22.83■■□□□ 1.24
LSM11-201ENST00000286307 PDILTQ8N807 584 aa22.83■■□□□ 1.24
LSM11-201ENST00000286307 MAP3K12Q12852 859 aa22.83■■□□□ 1.24
LSM11-201ENST00000286307 JARID2Q92833 1246 aaPredicted RBP22.83■■□□□ 1.24
LSM11-201ENST00000286307 SMARCC1Q92922 1105 aaPredicted RBP22.83■■□□□ 1.24
LSM11-201ENST00000286307 PDE3AQ14432 1141 aa22.82■■□□□ 1.24
LSM11-201ENST00000286307 CWC25Q9NXE8 425 aaPredicted RBP22.82■■□□□ 1.24
LSM11-201ENST00000286307 DNAAF4Q8WXU2 420 aa22.82■■□□□ 1.24
LSM11-201ENST00000286307 MAGEC2Q9UBF1 373 aaPredicted RBP22.82■■□□□ 1.24
LSM11-201ENST00000286307 SYCP1Q15431 976 aa22.82■■□□□ 1.24
LSM11-201ENST00000286307 SEC63Q9UGP8 760 aaKnown RBP22.82■■□□□ 1.24
LSM11-201ENST00000286307 BOLA2Q9H3K6 86 aa22.81■■□□□ 1.24
LSM11-201ENST00000286307 BTG4Q9NY30 223 aa22.81■■□□□ 1.24
LSM11-201ENST00000286307 HSP90AB2PQ58FF8 381 aa22.81■■□□□ 1.24
LSM11-201ENST00000286307 ZNF396Q96N95 335 aaPredicted RBP22.81■■□□□ 1.24
LSM11-201ENST00000286307 SYCP2Q9BX26 1530 aa22.81■■□□□ 1.24
LSM11-201ENST00000286307 SNRPA1P09661 255 aaKnown RBP22.81■■□□□ 1.24
LSM11-201ENST00000286307 ZMYM3Q14202 1370 aa22.81■■□□□ 1.24
LSM11-201ENST00000286307 CHMP5Q9NZZ3 219 aa22.8■■□□□ 1.24
LSM11-201ENST00000286307 IL2RBP14784 551 aa22.8■■□□□ 1.24
LSM11-201ENST00000286307 HOMER1Q86YM7 354 aa22.8■■□□□ 1.24
LSM11-201ENST00000286307 NOL7Q9UMY1 257 aaKnown RBP22.8■■□□□ 1.24
LSM11-201ENST00000286307 KAT6BQ8WYB5 2073 aa22.8■■□□□ 1.24
LSM11-201ENST00000286307 PPIP5K1Q6PFW1 1433 aa22.79■■□□□ 1.24
LSM11-201ENST00000286307 TMEM57Q8N5G2 664 aa22.79■■□□□ 1.24
LSM11-201ENST00000286307 NAPBQ9H115 298 aa22.79■■□□□ 1.24
LSM11-201ENST00000286307 PDCL3Q9H2J4 239 aa22.79■■□□□ 1.24
LSM11-201ENST00000286307 BRPF1P55201 1214 aaPredicted RBP22.79■■□□□ 1.24
LSM11-201ENST00000286307 ANKRD1Q15327 319 aa22.79■■□□□ 1.24
LSM11-201ENST00000286307 LDHAL6AQ6ZMR3 332 aa22.79■■□□□ 1.24
LSM11-201ENST00000286307 RANBP6O60518 1105 aaKnown RBP22.79■■□□□ 1.24
LSM11-201ENST00000286307 CCDC8Q9H0W5 538 aaPredicted RBP22.79■■□□□ 1.24
LSM11-201ENST00000286307 KIF21AQ7Z4S6 1674 aa22.78■■□□□ 1.24
LSM11-201ENST00000286307 F8W031 263 aaPredicted RBP22.78■■□□□ 1.24
LSM11-201ENST00000286307 RTCBQ9Y3I0 505 aaKnown RBP22.78■■□□□ 1.24
LSM11-201ENST00000286307 SLC39A6Q13433 755 aa22.78■■□□□ 1.24
LSM11-201ENST00000286307 SPDYE4A6NLX3 237 aa22.77■■□□□ 1.24
LSM11-201ENST00000286307 TNIP1Q15025 636 aa22.77■■□□□ 1.24
LSM11-201ENST00000286307 KIF1BPQ96EK5 621 aa22.77■■□□□ 1.24
LSM11-201ENST00000286307 NAT10Q9H0A0 1025 aaKnown RBP22.77■■□□□ 1.24
LSM11-201ENST00000286307 BLOC1S2Q6QNY1 142 aa22.77■■□□□ 1.24
LSM11-201ENST00000286307 CHD1LQ86WJ1 897 aa22.77■■□□□ 1.24
LSM11-201ENST00000286307 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
LSM11-201ENST00000286307 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
LSM11-201ENST00000286307 PDCP20941 246 aa22.77■■□□□ 1.23
LSM11-201ENST00000286307 CDKL5O76039 1030 aa22.76■■□□□ 1.23
LSM11-201ENST00000286307 CCDC152Q4G0S7 254 aa22.76■■□□□ 1.23
LSM11-201ENST00000286307 JAKMIP1Q96N16 626 aaKnown RBP22.76■■□□□ 1.23
LSM11-201ENST00000286307 TTC21AQ8NDW8 1320 aa22.76■■□□□ 1.23
LSM11-201ENST00000286307 KINO60870 393 aaKnown RBP22.76■■□□□ 1.23
LSM11-201ENST00000286307 RBM26Q5T8P6 1007 aaKnown RBP22.76■■□□□ 1.23
LSM11-201ENST00000286307 TMEM87AQ8NBN3 555 aa22.76■■□□□ 1.23
LSM11-201ENST00000286307 ECM2O94769 699 aaPredicted RBP22.76■■□□□ 1.23
LSM11-201ENST00000286307 NIP7Q9Y221 180 aaKnown RBP eCLIP22.75■■□□□ 1.23
LSM11-201ENST00000286307 FAM83GA6ND36 823 aa22.75■■□□□ 1.23
LSM11-201ENST00000286307 SMARCA5O60264 1052 aaPredicted RBP22.75■■□□□ 1.23
LSM11-201ENST00000286307 STK32BQ9NY57 414 aa22.75■■□□□ 1.23
LSM11-201ENST00000286307 KCNA6P17658 529 aa22.74■■□□□ 1.23
LSM11-201ENST00000286307 LRRFIP2Q9Y608 721 aaKnown RBP22.74■■□□□ 1.23
LSM11-201ENST00000286307 ANXA1P04083 346 aa22.74■■□□□ 1.23
LSM11-201ENST00000286307 HDAC9Q9UKV0 1011 aa22.74■■□□□ 1.23
LSM11-201ENST00000286307 SIRT1Q96EB6 747 aa22.74■■□□□ 1.23
LSM11-201ENST00000286307 PIP4K2AP48426 406 aaPredicted RBP22.74■■□□□ 1.23
LSM11-201ENST00000286307 RPAP2Q8IXW5 612 aaPredicted RBP22.74■■□□□ 1.23
LSM11-201ENST00000286307 DUOX2Q9NRD8 1548 aa22.74■■□□□ 1.23
LSM11-201ENST00000286307 UBE3BQ7Z3V4 1068 aa22.73■■□□□ 1.23
LSM11-201ENST00000286307 TTLL5Q6EMB2 1281 aa22.73■■□□□ 1.23
LSM11-201ENST00000286307 TANGO6Q9C0B7 1094 aa22.73■■□□□ 1.23
LSM11-201ENST00000286307 CABP5Q9NP86 173 aa22.73■■□□□ 1.23
LSM11-201ENST00000286307 PDRG1Q9NUG6 133 aa22.73■■□□□ 1.23
LSM11-201ENST00000286307 BIVM-ERCC5R4GMW8 1640 aa22.73■■□□□ 1.23
LSM11-201ENST00000286307 CUL5Q93034 780 aa22.72■■□□□ 1.23
LSM11-201ENST00000286307 RAB11FIP3O75154 756 aa22.72■■□□□ 1.23
LSM11-201ENST00000286307 JMYQ8N9B5 988 aa22.72■■□□□ 1.23
LSM11-201ENST00000286307 NLRP3Q96P20 1036 aa22.72■■□□□ 1.23
LSM11-201ENST00000286307 ANKRD18AQ8IVF6 992 aa22.72■■□□□ 1.23
LSM11-201ENST00000286307 TRAPPC8Q9Y2L5 1435 aa22.72■■□□□ 1.23
LSM11-201ENST00000286307 OGFOD1Q8N543 542 aa22.71■■□□□ 1.23
LSM11-201ENST00000286307 TSHZ2Q9NRE2 1034 aa22.71■■□□□ 1.23
LSM11-201ENST00000286307 BMP2KQ9NSY1 1161 aaPredicted RBP22.71■■□□□ 1.23
LSM11-201ENST00000286307 MCM2P49736 904 aa22.71■■□□□ 1.23
LSM11-201ENST00000286307 HLA-DOAP06340 250 aa22.7■■□□□ 1.23
LSM11-201ENST00000286307 FIBPO43427 364 aa22.7■■□□□ 1.22
LSM11-201ENST00000286307 LDHCP07864 332 aa22.7■■□□□ 1.22
LSM11-201ENST00000286307 BAG3O95817 575 aa22.7■■□□□ 1.22
LSM11-201ENST00000286307 FLIIQ13045 1269 aa22.69■■□□□ 1.22
LSM11-201ENST00000286307 FAM98CQ17RN3 349 aaKnown RBP22.69■■□□□ 1.22
LSM11-201ENST00000286307 JDP2Q8WYK2 163 aa22.69■■□□□ 1.22
LSM11-201ENST00000286307 RABEP1Q15276 862 aa22.69■■□□□ 1.22
LSM11-201ENST00000286307 ITSN2Q9NZM3 1697 aa22.69■■□□□ 1.22
LSM11-201ENST00000286307 ME1P48163 572 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms