RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 COL5A2P05997 1499 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-201ENST00000285124 MYL6BP14649 208 aa12.51□□□□□ -0.41
PPP4R1-201ENST00000285124 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-201ENST00000285124 USP21Q9UK80 565 aa12.5□□□□□ -0.41
PPP4R1-201ENST00000285124 IPO8O15397 1037 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-201ENST00000285124 EIF4A1P60842 406 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-201ENST00000285124 FKBP5Q13451 457 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-201ENST00000285124 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
PPP4R1-201ENST00000285124 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
PPP4R1-201ENST00000285124 SLC52A2Q9HAB3 445 aa12.49□□□□□ -0.41
PPP4R1-201ENST00000285124 ZNF496Q96IT1 587 aaPredicted RBP12.49□□□□□ -0.41
PPP4R1-201ENST00000285124 DDB1Q16531 1140 aa12.48□□□□□ -0.41
PPP4R1-201ENST00000285124 ZNF790Q6PG37 636 aa12.48□□□□□ -0.41
PPP4R1-201ENST00000285124 CHPF2Q9P2E5 772 aa12.48□□□□□ -0.41
PPP4R1-201ENST00000285124 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
PPP4R1-201ENST00000285124 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 CCDC30Q5VVM6 783 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 PCDH11XQ9BZA7 1347 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 PCDH11YQ9BZA8 1340 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 JCADQ9P266 1359 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 PDE3AQ14432 1141 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 ALDH1L2Q3SY69 923 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 ASAP1Q9ULH1 1129 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
PPP4R1-201ENST00000285124 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.41
PPP4R1-201ENST00000285124 PHRF1Q9P1Y6 1649 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-201ENST00000285124 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
PPP4R1-201ENST00000285124 TMOD3Q9NYL9 352 aa12.46□□□□□ -0.42
PPP4R1-201ENST00000285124 HSP90AB1P08238 724 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-201ENST00000285124 KCNQ4P56696 695 aa12.45□□□□□ -0.42
PPP4R1-201ENST00000285124 MVPQ14764 893 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-201ENST00000285124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.429e-7■■■□□ 15
PPP4R1-201ENST00000285124 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
PPP4R1-201ENST00000285124 PHLPP1O60346 1717 aa12.45□□□□□ -0.42
PPP4R1-201ENST00000285124 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-201ENST00000285124 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
PPP4R1-201ENST00000285124 IGHDP01880 384 aa12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 RGS3P49796 1198 aa12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 FLIIQ13045 1269 aa12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 SPATA31A1Q5TZJ5 1347 aa12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 KCNQ2O43526 872 aa12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 ERICH6BQ5W0A0 696 aa12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 KDM6AO15550 1401 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 AFF2P51816 1311 aa12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 APBB1O00213 710 aa12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 PIGBQ92521 554 aa12.44□□□□□ -0.42
PPP4R1-201ENST00000285124 NHSL1Q5SYE7 1610 aa12.43□□□□□ -0.42
PPP4R1-201ENST00000285124 A1BGP04217 495 aa12.42□□□□□ -0.42
PPP4R1-201ENST00000285124 MARCH10Q8NA82 808 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-201ENST00000285124 PI4KAP2A4QPH2 592 aa12.42□□□□□ -0.42
PPP4R1-201ENST00000285124 RTL5Q5HYW3 569 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-201ENST00000285124 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-201ENST00000285124 PI4KAP1Q8N8J0 262 aa12.42□□□□□ -0.42
PPP4R1-201ENST00000285124 JARID2Q92833 1246 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-201ENST00000285124 API5Q9BZZ5 524 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-201ENST00000285124 QTRT2Q9H974 415 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-201ENST00000285124 PTF1AQ7RTS3 328 aa12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 SPATA31A5Q5VU36 1347 aa12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 SPATA31A7Q8IWB4 1347 aa12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 OVOS2A0A0G2JMS6 1433 aa12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 COL18A1P39060 1754 aa12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 MS4A1P11836 297 aa12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 DDX19BQ9UMR2 479 aa12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 EP400Q96L91 3159 aa12.41□□□□□ -0.42
PPP4R1-201ENST00000285124 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-201ENST00000285124 MEIS3Q99687 375 aa12.4□□□□□ -0.42
PPP4R1-201ENST00000285124 USP54Q70EL1 1684 aa12.4□□□□□ -0.43
PPP4R1-201ENST00000285124 COPS6Q7L5N1 327 aa12.39□□□□□ -0.43
PPP4R1-201ENST00000285124 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-201ENST00000285124 ERVV-2B6SEH9 535 aa12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 SMIM5Q71RC9 77 aa12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 RIC3Q7Z5B4 369 aa12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 DNAJC10Q8IXB1 793 aa12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 XAGE3Q8WTP9 111 aa12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 DBF4Q9UBU7 674 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 ZBTB7BO15156 539 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 NCAPD2Q15021 1401 aa12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 CWF19L2Q2TBE0 894 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 ATG3Q9NT62 314 aa12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 MAP3K2Q9Y2U5 619 aa12.38□□□□□ -0.43
PPP4R1-201ENST00000285124 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
PPP4R1-201ENST00000285124 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
PPP4R1-201ENST00000285124 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-201ENST00000285124 GJD4Q96KN9 370 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-201ENST00000285124 VPS72Q15906 364 aa12.37□□□□□ -0.43
PPP4R1-201ENST00000285124 ZBTB3Q9H5J0 574 aa12.37□□□□□ -0.43
PPP4R1-201ENST00000285124 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
PPP4R1-201ENST00000285124 ZBTB40Q9NUA8 1239 aa12.36□□□□□ -0.43
PPP4R1-201ENST00000285124 LRP6O75581 1613 aa12.36□□□□□ -0.43
PPP4R1-201ENST00000285124 SEPT12Q8IYM1 358 aa12.36□□□□□ -0.43
PPP4R1-201ENST00000285124 ARHGAP45Q92619 1136 aa12.36□□□□□ -0.43
PPP4R1-201ENST00000285124 BCL9LQ86UU0 1499 aa12.36□□□□□ -0.43
PPP4R1-201ENST00000285124 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-201ENST00000285124 TTLL7Q6ZT98 887 aa12.34□□□□□ -0.43
PPP4R1-201ENST00000285124 NPM2Q86SE8 214 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms