RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 DHX37Q8IY37 1157 aaKnown RBP19.26■□□□□ 0.67
SH3RF1-201ENST00000284637 CCDC85AQ96PX6 553 aaPredicted RBP19.26■□□□□ 0.67
SH3RF1-201ENST00000284637 RBM27Q9P2N5 1060 aaKnown RBP19.26■□□□□ 0.67
SH3RF1-201ENST00000284637 C16orf45Q96MC5 204 aaPredicted RBP19.26■□□□□ 0.67
SH3RF1-201ENST00000284637 BOLA2Q9H3K6 86 aa19.26■□□□□ 0.67
SH3RF1-201ENST00000284637 NCOA1Q15788 1441 aa19.26■□□□□ 0.67
SH3RF1-201ENST00000284637 CLIP2Q9UDT6 1046 aa19.26■□□□□ 0.67
SH3RF1-201ENST00000284637 NOL7Q9UMY1 257 aaKnown RBP19.26■□□□□ 0.67
SH3RF1-201ENST00000284637 PLCD4Q9BRC7 762 aa19.25■□□□□ 0.67
SH3RF1-201ENST00000284637 LUC7LQ9NQ29 371 aaKnown RBP19.25■□□□□ 0.67
SH3RF1-201ENST00000284637 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
SH3RF1-201ENST00000284637 RAB11FIP3O75154 756 aa19.25■□□□□ 0.67
SH3RF1-201ENST00000284637 SLC52A1Q9NWF4 448 aa19.25■□□□□ 0.67
SH3RF1-201ENST00000284637 TRMT1Q9NXH9 659 aaKnown RBP19.25■□□□□ 0.67
SH3RF1-201ENST00000284637 BMS1Q14692 1282 aaKnown RBP19.25■□□□□ 0.67
SH3RF1-201ENST00000284637 SPINK5Q9NQ38 1064 aaPredicted RBP19.25■□□□□ 0.67
SH3RF1-201ENST00000284637 URI1O94763 535 aaPredicted RBP19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 ERLIN2O94905 339 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 SYCP1Q15431 976 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 STRN4Q9NRL3 753 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 GUCY1B3Q02153 619 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 PIBF1Q8WXW3 757 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 GNL3LQ9NVN8 582 aaKnown RBP19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 ATP2B2Q01814 1243 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 ANO10Q9NW15 660 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 PLEKHH2Q8IVE3 1493 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 GPATCH11Q8N954 259 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 TDO2P48775 406 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 UBAC1Q9BSL1 405 aa19.24■□□□□ 0.67
SH3RF1-201ENST00000284637 UVSSAQ2YD98 709 aa19.23■□□□□ 0.67
SH3RF1-201ENST00000284637 LIMCH1Q9UPQ0 1083 aa19.23■□□□□ 0.67
SH3RF1-201ENST00000284637 GNAT3A8MTJ3 354 aa19.23■□□□□ 0.67
SH3RF1-201ENST00000284637 POLR3GO15318 223 aaPredicted RBP19.23■□□□□ 0.67
SH3RF1-201ENST00000284637 IDH1O75874 414 aaKnown RBP19.23■□□□□ 0.67
SH3RF1-201ENST00000284637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.23■□□□□ 0.67
SH3RF1-201ENST00000284637 ADCY5O95622 1261 aa19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 NOLC1Q14978 699 aaKnown RBP eCLIP19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 BMP2KLQ5H9B9 411 aa19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 SLC26A8Q96RN1 970 aa19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 TFIP11Q9UBB9 837 aaKnown RBP19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 EIF5P55010 431 aaKnown RBP19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 MPHOSPH8Q99549 860 aa19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 SH2B1Q9NRF2 756 aaPredicted RBP19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 SSBP05455 408 aaKnown RBP eCLIP19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 TERF1P54274 439 aa19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 FAM107BQ9H098 131 aa19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 IMMTQ16891 758 aaKnown RBP19.22■□□□□ 0.67
SH3RF1-201ENST00000284637 NEFHP12036 1026 aa19.21■□□□□ 0.67
SH3RF1-201ENST00000284637 GTF2A1P52655 376 aaPredicted RBP19.21■□□□□ 0.67
SH3RF1-201ENST00000284637 KIAA1328Q86T90 577 aa19.21■□□□□ 0.67
SH3RF1-201ENST00000284637 TAX1BP1Q86VP1 789 aa19.21■□□□□ 0.67
SH3RF1-201ENST00000284637 ZSCAN23Q3MJ62 389 aa19.21■□□□□ 0.67
SH3RF1-201ENST00000284637 KLHL10Q6JEL2 608 aa19.21■□□□□ 0.67
SH3RF1-201ENST00000284637 SPG7Q9UQ90 795 aa19.21■□□□□ 0.67
SH3RF1-201ENST00000284637 PAXBP1Q9Y5B6 917 aa19.21■□□□□ 0.67
SH3RF1-201ENST00000284637 GBP3Q9H0R5 595 aa19.21■□□□□ 0.67
SH3RF1-201ENST00000284637 SUPT6HQ7KZ85 1726 aaKnown RBP19.21■□□□□ 0.66
SH3RF1-201ENST00000284637 NUDT16Q96DE0 195 aaKnown RBP19.2■□□□□ 0.66
SH3RF1-201ENST00000284637 CDK13Q14004 1512 aaKnown RBP19.2■□□□□ 0.66
SH3RF1-201ENST00000284637 ABCC11Q96J66 1382 aa19.2■□□□□ 0.66
SH3RF1-201ENST00000284637 CCDC8Q9H0W5 538 aaPredicted RBP19.2■□□□□ 0.66
SH3RF1-201ENST00000284637 CCDC61Q9Y6R9 512 aa19.2■□□□□ 0.66
SH3RF1-201ENST00000284637 RPGRIP1LQ68CZ1 1315 aa19.2■□□□□ 0.66
SH3RF1-201ENST00000284637 SOGA3Q5TF21 947 aa19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 U3KPZ7 1027 aaPredicted RBP19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 ZSCAN12O43309 604 aa19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 POLA1P09884 1462 aaPredicted RBP19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 C8orf34Q49A92 452 aa19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 TSHZ3Q63HK5 1081 aa19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 LRSAM1Q6UWE0 723 aa19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 EMILIN1Q9Y6C2 1016 aa19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 NEMFO60524 1076 aa19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 TAF7Q15545 349 aaPredicted RBP19.19■□□□□ 0.66
SH3RF1-201ENST00000284637 IQCEQ6IPM2 695 aa19.18■□□□□ 0.66
SH3RF1-201ENST00000284637 WAPLQ7Z5K2 1190 aa19.18■□□□□ 0.66
SH3RF1-201ENST00000284637 TOP1P11387 765 aaKnown RBP19.18■□□□□ 0.66
SH3RF1-201ENST00000284637 PROSER2Q86WR7 435 aaPredicted RBP19.18■□□□□ 0.66
SH3RF1-201ENST00000284637 TXLNBQ8N3L3 684 aa19.18■□□□□ 0.66
SH3RF1-201ENST00000284637 CRACR2AQ9BSW2 395 aa19.18■□□□□ 0.66
SH3RF1-201ENST00000284637 FEZ1Q99689 392 aa19.18■□□□□ 0.66
SH3RF1-201ENST00000284637 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 STX6O43752 255 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 KIF4BQ2VIQ3 1234 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 PLEKHH1Q9ULM0 1364 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 C8orf76Q96K31 380 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 HECW1Q76N89 1606 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 NME9Q86XW9 330 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 WASF1Q92558 559 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 AIDAQ96BJ3 306 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 TMX1Q9H3N1 280 aa19.17■□□□□ 0.66
SH3RF1-201ENST00000284637 GJB2P29033 226 aa19.16■□□□□ 0.66
SH3RF1-201ENST00000284637 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
SH3RF1-201ENST00000284637 PCDHB15Q9Y5E8 787 aa19.16■□□□□ 0.66
SH3RF1-201ENST00000284637 HCLS1P14317 486 aaPredicted RBP19.16■□□□□ 0.66
SH3RF1-201ENST00000284637 GOLGA6L7A0A1B0GV03 622 aa19.16■□□□□ 0.66
SH3RF1-201ENST00000284637 RAPGEF3O95398 923 aa19.16■□□□□ 0.66
SH3RF1-201ENST00000284637 RAI14Q9P0K7 980 aa19.16■□□□□ 0.66
SH3RF1-201ENST00000284637 CCDC148Q8NFR7 591 aa19.16■□□□□ 0.66
SH3RF1-201ENST00000284637 BIN1O00499 593 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms