RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 IPO8O15397 1037 aaKnown RBP26.71■■□□□ 1.87
YBX3-202ENST00000279550 KRT24Q2M2I5 525 aa26.71■■□□□ 1.87
YBX3-202ENST00000279550 NGLY1Q96IV0 654 aa26.71■■□□□ 1.87
YBX3-202ENST00000279550 ITPRIPQ8IWB1 547 aa26.7■■□□□ 1.86
YBX3-202ENST00000279550 PHKG2P15735 406 aa26.69■■□□□ 1.86
YBX3-202ENST00000279550 PDE4AP27815 886 aa26.69■■□□□ 1.86
YBX3-202ENST00000279550 MPRIPQ6WCQ1 1025 aa26.69■■□□□ 1.86
YBX3-202ENST00000279550 UNC5CLQ8IV45 518 aa26.68■■□□□ 1.86
YBX3-202ENST00000279550 IFNL2Q8IZJ0 200 aa26.68■■□□□ 1.86
YBX3-202ENST00000279550 FNBP4Q8N3X1 1017 aaPredicted RBP26.68■■□□□ 1.86
YBX3-202ENST00000279550 ZCRB1Q8TBF4 217 aaKnown RBP26.68■■□□□ 1.86
YBX3-202ENST00000279550 LGR6Q9HBX8 967 aa26.68■■□□□ 1.86
YBX3-202ENST00000279550 CYP27B1O15528 508 aa26.68■■□□□ 1.86
YBX3-202ENST00000279550 BCL9LQ86UU0 1499 aa26.67■■□□□ 1.86
YBX3-202ENST00000279550 SPATA31A1Q5TZJ5 1347 aa26.67■■□□□ 1.86
YBX3-202ENST00000279550 DISP2A7MBM2 1401 aa26.67■■□□□ 1.86
YBX3-202ENST00000279550 MIS18AQ9NYP9 233 aa26.67■■□□□ 1.86
YBX3-202ENST00000279550 RNMTO43148 476 aaKnown RBP26.66■■□□□ 1.86
YBX3-202ENST00000279550 DDX19BQ9UMR2 479 aa26.66■■□□□ 1.86
YBX3-202ENST00000279550 PCDH11XQ9BZA7 1347 aa26.66■■□□□ 1.86
YBX3-202ENST00000279550 PCDH11YQ9BZA8 1340 aa26.66■■□□□ 1.86
YBX3-202ENST00000279550 BACH2Q9BYV9 841 aa26.65■■□□□ 1.86
YBX3-202ENST00000279550 SPATA31A5Q5VU36 1347 aa26.65■■□□□ 1.86
YBX3-202ENST00000279550 SPATA31A7Q8IWB4 1347 aa26.65■■□□□ 1.86
YBX3-202ENST00000279550 ADAMTS7Q9UKP4 1686 aa26.65■■□□□ 1.86
YBX3-202ENST00000279550 MEX3CQ5U5Q3 659 aaKnown RBP26.65■■□□□ 1.86
YBX3-202ENST00000279550 THRAP3Q9Y2W1 955 aaKnown RBP26.65■■□□□ 1.86
YBX3-202ENST00000279550 TAF7Q15545 349 aaPredicted RBP26.64■■□□□ 1.85
YBX3-202ENST00000279550 ARHGAP45Q92619 1136 aa26.64■■□□□ 1.85
YBX3-202ENST00000279550 RGS3P49796 1198 aa26.63■■□□□ 1.85
YBX3-202ENST00000279550 KDM6AO15550 1401 aaPredicted RBP26.63■■□□□ 1.85
YBX3-202ENST00000279550 TSPYL4Q9UJ04 414 aa26.62■■□□□ 1.85
YBX3-202ENST00000279550 HSP90AB1P08238 724 aaKnown RBP26.62■■□□□ 1.85
YBX3-202ENST00000279550 TEFQ10587 303 aa26.62■■□□□ 1.85
YBX3-202ENST00000279550 BABAM1Q9NWV8 329 aa26.62■■□□□ 1.85
YBX3-202ENST00000279550 CCDC9Q9Y3X0 531 aaKnown RBP26.62■■□□□ 1.85
YBX3-202ENST00000279550 DCAF5Q96JK2 942 aa26.61■■□□□ 1.85
YBX3-202ENST00000279550 ZBTB40Q9NUA8 1239 aa26.61■■□□□ 1.85
YBX3-202ENST00000279550 SHANK3Q9BYB0 1731 aa26.61■■□□□ 1.85
YBX3-202ENST00000279550 VPS72Q15906 364 aa26.6■■□□□ 1.85
YBX3-202ENST00000279550 USP21Q9UK80 565 aa26.6■■□□□ 1.85
YBX3-202ENST00000279550 ABCC4O15439 1325 aa26.6■■□□□ 1.85
YBX3-202ENST00000279550 VIRMAQ69YN4 1812 aaKnown RBP26.6■■□□□ 1.85
YBX3-202ENST00000279550 WNK3Q9BYP7 1800 aa26.6■■□□□ 1.85
YBX3-202ENST00000279550 MSH5O43196 834 aa26.59■■□□□ 1.85
YBX3-202ENST00000279550 CDCA7Q9BWT1 371 aaPredicted RBP26.59■■□□□ 1.85
YBX3-202ENST00000279550 RWDD1Q9H446 243 aaPredicted RBP26.59■■□□□ 1.85
YBX3-202ENST00000279550 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.58■■□□□ 1.85
YBX3-202ENST00000279550 SCN11AQ9UI33 1791 aa26.58■■□□□ 1.85
YBX3-202ENST00000279550 DDX54Q8TDD1 881 aaKnown RBP26.58■■□□□ 1.85
YBX3-202ENST00000279550 BARGINQ6ZT62 677 aa26.57■■□□□ 1.84
YBX3-202ENST00000279550 NKX1-1Q15270 411 aaPredicted RBP26.56■■□□□ 1.84
YBX3-202ENST00000279550 AFF2P51816 1311 aa26.55■■□□□ 1.84
YBX3-202ENST00000279550 API5Q9BZZ5 524 aaKnown RBP26.55■■□□□ 1.84
YBX3-202ENST00000279550 TNS2Q63HR2 1409 aa26.55■■□□□ 1.84
YBX3-202ENST00000279550 SLC52A2Q9HAB3 445 aa26.54■■□□□ 1.84
YBX3-202ENST00000279550 PDZRN3Q9UPQ7 1066 aa26.54■■□□□ 1.84
YBX3-202ENST00000279550 MRC1P22897 1456 aa26.54■■□□□ 1.84
YBX3-202ENST00000279550 RGS12O14924 1447 aa26.54■■□□□ 1.84
YBX3-202ENST00000279550 SIPA1L3O60292 1781 aaPredicted RBP26.54■■□□□ 1.84
YBX3-202ENST00000279550 BTBD11A6QL63 1104 aa26.53■■□□□ 1.84
YBX3-202ENST00000279550 EXOC5O00471 708 aa26.53■■□□□ 1.84
YBX3-202ENST00000279550 HDAC1Q13547 482 aaPredicted RBP26.53■■□□□ 1.84
YBX3-202ENST00000279550 ZBTB7BO15156 539 aaPredicted RBP26.52■■□□□ 1.84
YBX3-202ENST00000279550 C8orf34Q49A92 452 aa26.51■■□□□ 1.83
YBX3-202ENST00000279550 NFATC2IPQ8NCF5 419 aa26.51■■□□□ 1.83
YBX3-202ENST00000279550 KDM3BQ7LBC6 1761 aa26.5■■□□□ 1.83
YBX3-202ENST00000279550 DDB1Q16531 1140 aa26.5■■□□□ 1.83
YBX3-202ENST00000279550 FBXO41Q8TF61 875 aa26.5■■□□□ 1.83
YBX3-202ENST00000279550 FAM98CQ17RN3 349 aaKnown RBP26.49■■□□□ 1.83
YBX3-202ENST00000279550 ERVV-2B6SEH9 535 aa26.48■■□□□ 1.83
YBX3-202ENST00000279550 CABP4P57796 275 aa26.48■■□□□ 1.83
YBX3-202ENST00000279550 FAM161AQ3B820 660 aa26.48■■□□□ 1.83
YBX3-202ENST00000279550 EIF4A1P60842 406 aaKnown RBP26.47■■□□□ 1.83
YBX3-202ENST00000279550 KCNQ3O43525 872 aa26.46■■□□□ 1.83
YBX3-202ENST00000279550 C1orf115Q9H7X2 142 aa26.46■■□□□ 1.83
YBX3-202ENST00000279550 ATRNO75882 1429 aa26.45■■□□□ 1.83
YBX3-202ENST00000279550 SLC4A2P04920 1241 aa26.45■■□□□ 1.82
YBX3-202ENST00000279550 G2E3Q7L622 706 aa26.45■■□□□ 1.82
YBX3-202ENST00000279550 GJD4Q96KN9 370 aaPredicted RBP26.45■■□□□ 1.82
YBX3-202ENST00000279550 TRPC5Q9UL62 973 aaPredicted RBP26.45■■□□□ 1.82
YBX3-202ENST00000279550 INTS3Q68E01 1043 aaKnown RBP26.44■■□□□ 1.82
YBX3-202ENST00000279550 NPM2Q86SE8 214 aaKnown RBP26.44■■□□□ 1.82
YBX3-202ENST00000279550 SOS1Q07889 1333 aaPredicted RBP26.44■■□□□ 1.82
YBX3-202ENST00000279550 ANP32AP39687 249 aaKnown RBP26.43■■□□□ 1.82
YBX3-202ENST00000279550 ZNF790Q6PG37 636 aa26.43■■□□□ 1.82
YBX3-202ENST00000279550 SMC5Q8IY18 1101 aa26.43■■□□□ 1.82
YBX3-202ENST00000279550 TOGARAM1Q9Y4F4 1720 aa26.43■■□□□ 1.82
YBX3-202ENST00000279550 PTPRCP08575 1304 aa26.43■■□□□ 1.82
YBX3-202ENST00000279550 GLI3P10071 1580 aa26.42■■□□□ 1.82
YBX3-202ENST00000279550 SLC39A6Q13433 755 aa26.42■■□□□ 1.82
YBX3-202ENST00000279550 CHMP4BQ9H444 224 aaKnown RBP26.42■■□□□ 1.82
YBX3-202ENST00000279550 MARCH10Q8NA82 808 aaPredicted RBP26.39■■□□□ 1.82
YBX3-202ENST00000279550 THSD7AQ9UPZ6 1657 aa26.39■■□□□ 1.82
YBX3-202ENST00000279550 HOXB7P09629 217 aa26.39■■□□□ 1.81
YBX3-202ENST00000279550 SIRT2Q8IXJ6 389 aa26.39■■□□□ 1.81
YBX3-202ENST00000279550 QTRT2Q9H974 415 aaKnown RBP26.39■■□□□ 1.81
YBX3-202ENST00000279550 HEG1Q9ULI3 1381 aa26.39■■□□□ 1.81
YBX3-202ENST00000279550 A0A0G2JS52 829 aa26.38■■□□□ 1.81
YBX3-202ENST00000279550 MYT1Q01538 1121 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms