RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 RBSNQ9H1K0 784 aa27.12■■□□□ 1.93
CDR2-201ENST00000268383 CCT4P50991 539 aaKnown RBP27.12■■□□□ 1.93
CDR2-201ENST00000268383 TNRQ92752 1358 aa27.12■■□□□ 1.93
CDR2-201ENST00000268383 PRIM1P49642 420 aaKnown RBP27.11■■□□□ 1.93
CDR2-201ENST00000268383 FLIIQ13045 1269 aa27.11■■□□□ 1.93
CDR2-201ENST00000268383 UNC5CLQ8IV45 518 aa27.11■■□□□ 1.93
CDR2-201ENST00000268383 TMX3Q96JJ7 454 aa27.11■■□□□ 1.93
CDR2-201ENST00000268383 UBE2Q2Q8WVN8 375 aa27.1■■□□□ 1.93
CDR2-201ENST00000268383 LTV1Q96GA3 475 aaPredicted RBP27.1■■□□□ 1.93
CDR2-201ENST00000268383 STK31Q9BXU1 1019 aa27.1■■□□□ 1.93
CDR2-201ENST00000268383 CEP170BQ9Y4F5 1589 aaPredicted RBP27.1■■□□□ 1.93
CDR2-201ENST00000268383 CEBPAP49715 358 aaPredicted RBP27.1■■□□□ 1.93
CDR2-201ENST00000268383 CCDC173Q0VFZ6 552 aa27.1■■□□□ 1.93
CDR2-201ENST00000268383 RGPD1P0DJD0 1748 aa27.1■■□□□ 1.93
CDR2-201ENST00000268383 ANO2Q9NQ90 1003 aa27.1■■□□□ 1.93
CDR2-201ENST00000268383 OSBPL3Q9H4L5 887 aa27.09■■□□□ 1.93
CDR2-201ENST00000268383 CWC22Q9HCG8 908 aaKnown RBP27.09■■□□□ 1.93
CDR2-201ENST00000268383 NGDNQ8NEJ9 315 aaKnown RBP27.09■■□□□ 1.93
CDR2-201ENST00000268383 ESYT1Q9BSJ8 1104 aa27.09■■□□□ 1.93
CDR2-201ENST00000268383 LRRCC1Q9C099 1032 aa27.09■■□□□ 1.93
CDR2-201ENST00000268383 IL1RAPL2Q9NP60 686 aa27.09■■□□□ 1.93
CDR2-201ENST00000268383 LRRFIP2Q9Y608 721 aaKnown RBP27.09■■□□□ 1.93
CDR2-201ENST00000268383 MX1P20591 662 aa27.08■■□□□ 1.93
CDR2-201ENST00000268383 IL25Q9H293 177 aa27.08■■□□□ 1.93
CDR2-201ENST00000268383 USP31Q70CQ4 1352 aa27.08■■□□□ 1.93
CDR2-201ENST00000268383 MAP4K4O95819 1239 aaPredicted RBP27.08■■□□□ 1.93
CDR2-201ENST00000268383 PPP1R9BQ96SB3 815 aa27.08■■□□□ 1.93
CDR2-201ENST00000268383 UPF3BQ9BZI7 483 aaKnown RBP27.08■■□□□ 1.93
CDR2-201ENST00000268383 ZNF445P59923 1031 aa27.07■■□□□ 1.92
CDR2-201ENST00000268383 SALL3Q9BXA9 1300 aa27.06■■□□□ 1.92
CDR2-201ENST00000268383 TMEM63CQ9P1W3 806 aa27.06■■□□□ 1.92
CDR2-201ENST00000268383 ARHGEF10O15013 1369 aa27.06■■□□□ 1.92
CDR2-201ENST00000268383 PTPRUQ92729 1446 aa27.06■■□□□ 1.92
CDR2-201ENST00000268383 ANP32BQ92688 251 aaKnown RBP27.05■■□□□ 1.92
CDR2-201ENST00000268383 SYCE3A1L190 88 aa27.04■■□□□ 1.92
CDR2-201ENST00000268383 IBTKQ9P2D0 1353 aaPredicted RBP27.04■■□□□ 1.92
CDR2-201ENST00000268383 CHMLP26374 656 aa27.04■■□□□ 1.92
CDR2-201ENST00000268383 USHBP1Q8N6Y0 703 aa27.04■■□□□ 1.92
CDR2-201ENST00000268383 NUTM1Q86Y26 1132 aa27.03■■□□□ 1.92
CDR2-201ENST00000268383 AMOTL2Q9Y2J4 779 aa27.03■■□□□ 1.92
CDR2-201ENST00000268383 FLT4P35916 1363 aa27.03■■□□□ 1.92
CDR2-201ENST00000268383 PHAXQ9H814 394 aaKnown RBP27.03■■□□□ 1.92
CDR2-201ENST00000268383 NLRP6P59044 892 aa27.02■■□□□ 1.92
CDR2-201ENST00000268383 ATP8B2P98198 1209 aa27.02■■□□□ 1.92
CDR2-201ENST00000268383 TPRNQ4KMQ1 711 aa27.02■■□□□ 1.92
CDR2-201ENST00000268383 IL17REQ8NFR9 667 aa27.02■■□□□ 1.92
CDR2-201ENST00000268383 NALCNQ8IZF0 1738 aa27.02■■□□□ 1.92
CDR2-201ENST00000268383 SSH2Q76I76 1423 aa27.01■■□□□ 1.92
CDR2-201ENST00000268383 TOPAZ1Q8N9V7 1692 aa27.01■■□□□ 1.92
CDR2-201ENST00000268383 IGSF1Q8N6C5 1336 aa27.01■■□□□ 1.92
CDR2-201ENST00000268383 SBNO1A3KN83 1393 aa27.01■■□□□ 1.91
CDR2-201ENST00000268383 CCDC30Q5VVM6 783 aa27.01■■□□□ 1.91
CDR2-201ENST00000268383 GDPD2Q9HCC8 539 aa27.01■■□□□ 1.91
CDR2-201ENST00000268383 RGPD8O14715 1765 aaPredicted RBP27■■□□□ 1.91
CDR2-201ENST00000268383 USP44Q9H0E7 712 aa27■■□□□ 1.91
CDR2-201ENST00000268383 UBR1Q8IWV7 1749 aa27■■□□□ 1.91
CDR2-201ENST00000268383 DTNBO60941 627 aa27■■□□□ 1.91
CDR2-201ENST00000268383 RNF214Q8ND24 703 aa27■■□□□ 1.91
CDR2-201ENST00000268383 GNAT3A8MTJ3 354 aa26.99■■□□□ 1.91
CDR2-201ENST00000268383 ZSCAN30Q86W11 494 aa26.99■■□□□ 1.91
CDR2-201ENST00000268383 LARP6Q9BRS8 491 aaKnown RBP26.99■■□□□ 1.91
CDR2-201ENST00000268383 KDRP35968 1356 aa26.99■■□□□ 1.91
CDR2-201ENST00000268383 GNAI3P08754 354 aa26.99■■□□□ 1.91
CDR2-201ENST00000268383 FMN2Q9NZ56 1722 aa26.98■■□□□ 1.91
CDR2-201ENST00000268383 EIF2S2P20042 333 aaKnown RBP26.96■■□□□ 1.91
CDR2-201ENST00000268383 UBTFL1P0CB47 393 aaPredicted RBP26.95■■□□□ 1.9
CDR2-201ENST00000268383 MSNP26038 577 aaKnown RBP26.95■■□□□ 1.9
CDR2-201ENST00000268383 C14orf37Q86TY3 774 aa26.95■■□□□ 1.9
CDR2-201ENST00000268383 BRD1O95696 1058 aa26.94■■□□□ 1.9
CDR2-201ENST00000268383 SETD1BQ9UPS6 1966 aaKnown RBP26.94■■□□□ 1.9
CDR2-201ENST00000268383 TTC21AQ8NDW8 1320 aa26.94■■□□□ 1.9
CDR2-201ENST00000268383 MCCP23508 829 aa26.94■■□□□ 1.9
CDR2-201ENST00000268383 HOXC9P31274 260 aa26.94■■□□□ 1.9
CDR2-201ENST00000268383 KIAA1211Q6ZU35 1233 aa26.94■■□□□ 1.9
CDR2-201ENST00000268383 ANXA1P04083 346 aa26.93■■□□□ 1.9
CDR2-201ENST00000268383 TUBGCP6Q96RT7 1819 aa26.93■■□□□ 1.9
CDR2-201ENST00000268383 SURF6O75683 361 aaKnown RBP26.93■■□□□ 1.9
CDR2-201ENST00000268383 HDGFL1Q5TGJ6 251 aa26.93■■□□□ 1.9
CDR2-201ENST00000268383 PPP1R42Q7Z4L9 355 aa26.93■■□□□ 1.9
CDR2-201ENST00000268383 PLEKHG5O94827 1062 aa26.92■■□□□ 1.9
CDR2-201ENST00000268383 GADD45BO75293 160 aaPredicted RBP26.92■■□□□ 1.9
CDR2-201ENST00000268383 CUL4AQ13619 759 aa26.92■■□□□ 1.9
CDR2-201ENST00000268383 LRSAM1Q6UWE0 723 aa26.92■■□□□ 1.9
CDR2-201ENST00000268383 PLEKHG1Q9ULL1 1385 aa26.92■■□□□ 1.9
CDR2-201ENST00000268383 XRN1Q8IZH2 1706 aaKnown RBP26.91■■□□□ 1.9
CDR2-201ENST00000268383 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.91■■□□□ 1.9
CDR2-201ENST00000268383 HSP90AA2PQ14568 343 aaPredicted RBP26.9■■□□□ 1.9
CDR2-201ENST00000268383 TAF7Q15545 349 aaPredicted RBP26.9■■□□□ 1.9
CDR2-201ENST00000268383 STAP2Q9UGK3 403 aa26.9■■□□□ 1.9
CDR2-201ENST00000268383 TCHHQ07283 1943 aa26.9■■□□□ 1.9
CDR2-201ENST00000268383 NBPF7P0C2Y1 421 aaPredicted RBP26.9■■□□□ 1.9
CDR2-201ENST00000268383 ZBTB7CA1YPR0 619 aa26.89■■□□□ 1.9
CDR2-201ENST00000268383 FAM208AQ9UK61 1670 aaKnown RBP26.89■■□□□ 1.9
CDR2-201ENST00000268383 XPCQ01831 940 aaPredicted RBP26.89■■□□□ 1.9
CDR2-201ENST00000268383 ABTB2Q8N961 1025 aa26.88■■□□□ 1.89
CDR2-201ENST00000268383 PIK3C2AO00443 1686 aa26.88■■□□□ 1.89
CDR2-201ENST00000268383 KCNQ3O43525 872 aa26.88■■□□□ 1.89
CDR2-201ENST00000268383 PDLIM2Q96JY6 352 aa26.88■■□□□ 1.89
CDR2-201ENST00000268383 EID1Q9Y6B2 187 aa26.88■■□□□ 1.89
CDR2-201ENST00000268383 SOS1Q07889 1333 aaPredicted RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms