RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 SCN11AQ9UI33 1791 aa26.09■■□□□ 1.77
LYSMD2-201ENST00000267838 EIF4A1P60842 406 aaKnown RBP26.08■■□□□ 1.77
LYSMD2-201ENST00000267838 CCDC30Q5VVM6 783 aa26.08■■□□□ 1.77
LYSMD2-201ENST00000267838 IFNL2Q8IZJ0 200 aa26.08■■□□□ 1.77
LYSMD2-201ENST00000267838 ZBTB40Q9NUA8 1239 aa26.08■■□□□ 1.77
LYSMD2-201ENST00000267838 STK31Q9BXU1 1019 aa26.07■■□□□ 1.76
LYSMD2-201ENST00000267838 PHLPP1O60346 1717 aa26.07■■□□□ 1.76
LYSMD2-201ENST00000267838 RGS12O14924 1447 aa26.07■■□□□ 1.76
LYSMD2-201ENST00000267838 CARD10Q9BWT7 1032 aa26.07■■□□□ 1.76
LYSMD2-201ENST00000267838 CHMP4BQ9H444 224 aaKnown RBP26.07■■□□□ 1.76
LYSMD2-201ENST00000267838 KDM6AO15550 1401 aaPredicted RBP26.06■■□□□ 1.76
LYSMD2-201ENST00000267838 EVA1CP58658 441 aa26.06■■□□□ 1.76
LYSMD2-201ENST00000267838 STRN4Q9NRL3 753 aa26.06■■□□□ 1.76
LYSMD2-201ENST00000267838 COL14A1Q05707 1796 aaKnown RBP26.05■■□□□ 1.76
LYSMD2-201ENST00000267838 COL16A1Q07092 1604 aaPredicted RBP26.05■■□□□ 1.76
LYSMD2-201ENST00000267838 KCNQ3O43525 872 aa26.05■■□□□ 1.76
LYSMD2-201ENST00000267838 ANP32AP39687 249 aaKnown RBP26.05■■□□□ 1.76
LYSMD2-201ENST00000267838 RWDD1Q9H446 243 aaPredicted RBP26.05■■□□□ 1.76
LYSMD2-201ENST00000267838 CACNA1FO60840 1977 aa26.04■■□□□ 1.76
LYSMD2-201ENST00000267838 ZBTB7BO15156 539 aaPredicted RBP26.04■■□□□ 1.76
LYSMD2-201ENST00000267838 TOM1O60784 492 aa26.04■■□□□ 1.76
LYSMD2-201ENST00000267838 HOXB7P09629 217 aa26.04■■□□□ 1.76
LYSMD2-201ENST00000267838 LARP1Q6PKG0 1096 aaKnown RBP26.04■■□□□ 1.76
LYSMD2-201ENST00000267838 NOP58Q9Y2X3 529 aaKnown RBP26.04■■□□□ 1.76
LYSMD2-201ENST00000267838 CYP27B1O15528 508 aa26.03■■□□□ 1.76
LYSMD2-201ENST00000267838 SKAP1Q86WV1 359 aa26.03■■□□□ 1.76
LYSMD2-201ENST00000267838 G2E3Q7L622 706 aa26.02■■□□□ 1.76
LYSMD2-201ENST00000267838 INTS3Q68E01 1043 aaKnown RBP26.02■■□□□ 1.76
LYSMD2-201ENST00000267838 HSP90AB1P08238 724 aaKnown RBP26.01■■□□□ 1.75
LYSMD2-201ENST00000267838 HDGFL1Q5TGJ6 251 aa26.01■■□□□ 1.75
LYSMD2-201ENST00000267838 NECTIN2Q92692 538 aa26.01■■□□□ 1.75
LYSMD2-201ENST00000267838 DCAF5Q96JK2 942 aa26.01■■□□□ 1.75
LYSMD2-201ENST00000267838 SLC52A2Q9HAB3 445 aa26.01■■□□□ 1.75
LYSMD2-201ENST00000267838 BTG4Q9NY30 223 aa26.01■■□□□ 1.75
LYSMD2-201ENST00000267838 IL2RBP14784 551 aa26■■□□□ 1.75
LYSMD2-201ENST00000267838 CERKQ8TCT0 537 aa26■■□□□ 1.75
LYSMD2-201ENST00000267838 CHMP4AQ9BY43 222 aa26■■□□□ 1.75
LYSMD2-201ENST00000267838 MRC1P22897 1456 aa25.99■■□□□ 1.75
LYSMD2-201ENST00000267838 ZCRB1Q8TBF4 217 aaKnown RBP25.99■■□□□ 1.75
LYSMD2-201ENST00000267838 PCDH11XQ9BZA7 1347 aa25.98■■□□□ 1.75
LYSMD2-201ENST00000267838 PCDH11YQ9BZA8 1340 aa25.98■■□□□ 1.75
LYSMD2-201ENST00000267838 UBAP1LF5GYI3 381 aa25.98■■□□□ 1.75
LYSMD2-201ENST00000267838 PIP4K2BP78356 416 aa25.98■■□□□ 1.75
LYSMD2-201ENST00000267838 HDAC1Q13547 482 aaPredicted RBP25.98■■□□□ 1.75
LYSMD2-201ENST00000267838 HEG1Q9ULI3 1381 aa25.97■■□□□ 1.75
LYSMD2-201ENST00000267838 FLIIQ13045 1269 aa25.97■■□□□ 1.75
LYSMD2-201ENST00000267838 EIF2S2P20042 333 aaKnown RBP25.95■■□□□ 1.75
LYSMD2-201ENST00000267838 NFATC2IPQ8NCF5 419 aa25.95■■□□□ 1.75
LYSMD2-201ENST00000267838 SHANK3Q9BYB0 1731 aa25.95■■□□□ 1.74
LYSMD2-201ENST00000267838 IPO9Q96P70 1041 aaKnown RBP25.95■■□□□ 1.74
LYSMD2-201ENST00000267838 GIGYF1O75420 1035 aaPredicted RBP25.93■■□□□ 1.74
LYSMD2-201ENST00000267838 ZNF790Q6PG37 636 aa25.93■■□□□ 1.74
LYSMD2-201ENST00000267838 FKBP5Q13451 457 aaPredicted RBP25.92■■□□□ 1.74
LYSMD2-201ENST00000267838 F6X3S4 739 aa25.92■■□□□ 1.74
LYSMD2-201ENST00000267838 RGS3P49796 1198 aa25.91■■□□□ 1.74
LYSMD2-201ENST00000267838 CCT4P50991 539 aaKnown RBP25.91■■□□□ 1.74
LYSMD2-201ENST00000267838 SLC39A6Q13433 755 aa25.91■■□□□ 1.74
LYSMD2-201ENST00000267838 C1orf115Q9H7X2 142 aa25.91■■□□□ 1.74
LYSMD2-201ENST00000267838 USP35Q9P2H5 1018 aa25.91■■□□□ 1.74
LYSMD2-201ENST00000267838 CABP4P57796 275 aa25.9■■□□□ 1.74
LYSMD2-201ENST00000267838 CHPF2Q9P2E5 772 aa25.9■■□□□ 1.74
LYSMD2-201ENST00000267838 PLCH1Q4KWH8 1693 aa25.9■■□□□ 1.74
LYSMD2-201ENST00000267838 SLC4A10Q6U841 1118 aa25.9■■□□□ 1.74
LYSMD2-201ENST00000267838 NKX1-1Q15270 411 aaPredicted RBP25.89■■□□□ 1.73
LYSMD2-201ENST00000267838 PHAXQ9H814 394 aaKnown RBP25.89■■□□□ 1.73
LYSMD2-201ENST00000267838 PDZRN3Q9UPQ7 1066 aa25.89■■□□□ 1.73
LYSMD2-201ENST00000267838 N4BP2Q86UW6 1770 aaPredicted RBP25.88■■□□□ 1.73
LYSMD2-201ENST00000267838 PXDNLA1KZ92 1463 aa25.87■■□□□ 1.73
LYSMD2-201ENST00000267838 ADAMTS2O95450 1211 aa25.87■■□□□ 1.73
LYSMD2-201ENST00000267838 SMC5Q8IY18 1101 aa25.87■■□□□ 1.73
LYSMD2-201ENST00000267838 DDX54Q8TDD1 881 aaKnown RBP25.87■■□□□ 1.73
LYSMD2-201ENST00000267838 DBF4Q9UBU7 674 aaPredicted RBP25.87■■□□□ 1.73
LYSMD2-201ENST00000267838 PRAMEF22A3QJZ6 481 aa25.86■■□□□ 1.73
LYSMD2-201ENST00000267838 TTC5Q8N0Z6 440 aa25.86■■□□□ 1.73
LYSMD2-201ENST00000267838 C5P01031 1676 aa25.86■■□□□ 1.73
LYSMD2-201ENST00000267838 ERVV-2B6SEH9 535 aa25.85■■□□□ 1.73
LYSMD2-201ENST00000267838 DISP2A7MBM2 1401 aa25.85■■□□□ 1.73
LYSMD2-201ENST00000267838 PDE4AP27815 886 aa25.84■■□□□ 1.73
LYSMD2-201ENST00000267838 NRAPQ86VF7 1730 aa25.84■■□□□ 1.73
LYSMD2-201ENST00000267838 MEIS3Q99687 375 aa25.84■■□□□ 1.73
LYSMD2-201ENST00000267838 ZNF496Q96IT1 587 aaPredicted RBP25.83■■□□□ 1.73
LYSMD2-201ENST00000267838 ZBTB47Q9UFB7 747 aaPredicted RBP25.83■■□□□ 1.73
LYSMD2-201ENST00000267838 NUTM2BA6NNL0 878 aaPredicted RBP25.82■■□□□ 1.72
LYSMD2-201ENST00000267838 NUTM2EB1AL46 878 aaPredicted RBP25.82■■□□□ 1.72
LYSMD2-201ENST00000267838 NUTM2AQ8IVF1 878 aaPredicted RBP25.82■■□□□ 1.72
LYSMD2-201ENST00000267838 SIRT2Q8IXJ6 389 aa25.82■■□□□ 1.72
LYSMD2-201ENST00000267838 WNK3Q9BYP7 1800 aa25.82■■□□□ 1.72
LYSMD2-201ENST00000267838 ANXA1P04083 346 aa25.82■■□□□ 1.72
LYSMD2-201ENST00000267838 BACH2Q9BYV9 841 aa25.82■■□□□ 1.72
LYSMD2-201ENST00000267838 FMNL2Q96PY5 1086 aa25.81■■□□□ 1.72
LYSMD2-201ENST00000267838 ATP10DQ9P241 1426 aa25.8■■□□□ 1.72
LYSMD2-201ENST00000267838 SNRPA1P09661 255 aaKnown RBP25.79■■□□□ 1.72
LYSMD2-201ENST00000267838 GCC1Q96CN9 775 aa25.79■■□□□ 1.72
LYSMD2-201ENST00000267838 TOGARAM1Q9Y4F4 1720 aa25.79■■□□□ 1.72
LYSMD2-201ENST00000267838 PROSER3Q2NL68 480 aa25.79■■□□□ 1.72
LYSMD2-201ENST00000267838 RPAP2Q8IXW5 612 aaPredicted RBP25.79■■□□□ 1.72
LYSMD2-201ENST00000267838 HYPKQ9NX55 129 aa25.79■■□□□ 1.72
LYSMD2-201ENST00000267838 PAPPAQ13219 1627 aa25.78■■□□□ 1.72
LYSMD2-201ENST00000267838 ANKRD44Q8N8A2 993 aa25.78■■□□□ 1.72
LYSMD2-201ENST00000267838 DDX21Q9NR30 783 aaKnown RBP eCLIP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms