RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 MCM3P25205 808 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 NUP133Q8WUM0 1156 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 ME1P48163 572 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 CCDC183Q5T5S1 534 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 HMOX1P09601 288 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 WASHC4Q2M389 1173 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 UVSSAQ2YD98 709 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 CCDC97Q96F63 343 aaPredicted RBP6.64□□□□□ -1.35
VCAN-201ENST00000265077 KIF21AQ7Z4S6 1674 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 SERPINC1P01008 464 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 MYCNP04198 464 aaPredicted RBP6.64□□□□□ -1.35
VCAN-201ENST00000265077 SH2B1Q9NRF2 756 aaPredicted RBP6.64□□□□□ -1.35
VCAN-201ENST00000265077 PSME1Q06323 249 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 NAA25Q14CX7 972 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 TRIM22Q8IYM9 498 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 RNF168Q8IYW5 571 aaPredicted RBP6.64□□□□□ -1.35
VCAN-201ENST00000265077 FAM135AQ9P2D6 1515 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 ABCC11Q96J66 1382 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 NEMFO60524 1076 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 CEP135Q66GS9 1140 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 RAD54L2Q9Y4B4 1467 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 EIF2AK4Q9P2K8 1649 aaKnown RBP6.64□□□□□ -1.35
VCAN-201ENST00000265077 MAP3K11Q16584 847 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 CNKSR2Q8WXI2 1034 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.64□□□□□ -1.35
VCAN-201ENST00000265077 NUP62CLQ9H1M0 184 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 NUCKS1Q9H1E3 243 aaKnown RBP6.64□□□□□ -1.35
VCAN-201ENST00000265077 GRIN2BQ13224 1484 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 GOLGA6L10A0A0M3HER8 536 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 CCDC196A0A1B0GTZ2 297 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 POTEB2H3BUK9 544 aa6.64□□□□□ -1.35
VCAN-201ENST00000265077 FOSBP53539 338 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 NAIPQ13075 1403 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 MAP9Q49MG5 647 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 SPATS2LQ9NUQ6 558 aaKnown RBP6.63□□□□□ -1.35
VCAN-201ENST00000265077 GOLGA6L9A6NEM1 432 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 SATB1Q01826 763 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 LARP1BQ659C4 914 aaKnown RBP6.63□□□□□ -1.35
VCAN-201ENST00000265077 ZSCAN23Q3MJ62 389 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 CTNNA3Q9UI47 895 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 ZNF500O60304 480 aaPredicted RBP6.63□□□□□ -1.35
VCAN-201ENST00000265077 JAKMIP3Q5VZ66 844 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 SPATA32Q96LK8 384 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 KIF14Q15058 1648 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 CAPN2P17655 700 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 JRKLQ9Y4A0 524 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 CNTRLQ7Z7A1 2325 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 DNMBPQ6XZF7 1577 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 CCDC171Q6TFL3 1326 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 NCAPD3P42695 1498 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 BIRC2Q13490 618 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 RNF187Q5TA31 235 aaPredicted RBP6.63□□□□□ -1.35
VCAN-201ENST00000265077 SFPQP23246 707 aaKnown RBP eCLIP6.63□□□□□ -1.35
VCAN-201ENST00000265077 HMGXB3Q12766 1538 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 SCAND2PQ9GZW5 306 aaPredicted RBP6.63□□□□□ -1.35
VCAN-201ENST00000265077 ANKRD30BQ9BXX2 1392 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 NCOA1Q15788 1441 aa6.63□□□□□ -1.35
VCAN-201ENST00000265077 BLOC1S2Q6QNY1 142 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 ZNF830Q96NB3 372 aaPredicted RBP6.62□□□□□ -1.35
VCAN-201ENST00000265077 NCAPGQ9BPX3 1015 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 YY1AP1Q9H869 796 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 IQGAP2Q13576 1575 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 TROQ12816 1431 aaPredicted RBP6.62□□□□□ -1.35
VCAN-201ENST00000265077 CEP57Q86XR8 500 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 NECTIN2Q92692 538 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 NUTM2FA1L443 756 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 FAM177BA6PVY3 158 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 EBAG9O00559 213 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 EVA1CP58658 441 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 EXOSC9Q06265 439 aaKnown RBP6.62□□□□□ -1.35
VCAN-201ENST00000265077 HSP90AB2PQ58FF8 381 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 ADCY5O95622 1261 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 RGS22Q8NE09 1264 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 TCHHQ07283 1943 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 MKRN1Q9UHC7 482 aaKnown RBP6.62□□□□□ -1.35
VCAN-201ENST00000265077 LRPPRCP42704 1394 aaKnown RBP6.62□□□□□ -1.35
VCAN-201ENST00000265077 PIK3R5Q8WYR1 880 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 CRACR2AQ9BSW2 395 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 ATAD2Q6PL18 1390 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 ALDH1L2Q3SY69 923 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 NBPF6Q5VWK0 638 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 NBPF5PQ86XG9 351 aaPredicted RBP6.62□□□□□ -1.35
VCAN-201ENST00000265077 NBPF4Q96M43 638 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 UPF3BQ9BZI7 483 aaKnown RBP6.62□□□□□ -1.35
VCAN-201ENST00000265077 RPGRIP1LQ68CZ1 1315 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 ZNF644Q9H582 1327 aaPredicted RBP6.62□□□□□ -1.35
VCAN-201ENST00000265077 CABP2Q9NPB3 220 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 PRKAR2BP31323 418 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 GCKP35557 465 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 EPRSP07814 1512 aaKnown RBP6.62□□□□□ -1.35
VCAN-201ENST00000265077 POTEDQ86YR6 584 aa6.62□□□□□ -1.35
VCAN-201ENST00000265077 GGNBP2Q9H3C7 697 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 BCL2L12Q9HB09 334 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 USP25Q9UHP3 1055 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 SLFN5Q08AF3 891 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 ZSCAN25Q6NSZ9 544 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 PLEKHO1Q53GL0 409 aaPredicted RBP6.61□□□□□ -1.35
VCAN-201ENST00000265077 SMARCC1Q92922 1105 aaPredicted RBP6.61□□□□□ -1.35
VCAN-201ENST00000265077 ARFGAP3Q9NP61 516 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 BCAR3O75815 825 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms