RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ADGBQ8N7X0 1667 aa18.96■□□□□ 0.63
PRPF40B-201ENST00000261897 LMOD3Q0VAK6 560 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 DACT1Q9NYF0 836 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 ERVK-7P63135 1459 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 PTPRTO14522 1441 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 TRIM34Q9BYJ4 488 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 SYNJ2O15056 1496 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 H3BQV1 296 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 PTPN14Q15678 1187 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 UVSSAQ2YD98 709 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 IFFO2Q5TF58 517 aa18.95■□□□□ 0.62
PRPF40B-201ENST00000261897 PRPF40BQ6NWY9 871 aaKnown RBP18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 DDX11Q96FC9 970 aa18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 OGFRQ9NZT2 677 aa18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 GNAI2P04899 355 aa18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 UNC5CLQ8IV45 518 aa18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 AK2P54819 239 aa18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 ELF2Q15723 593 aa18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 NME9Q86XW9 330 aa18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 KIAA1524Q8TCG1 905 aa18.94■□□□□ 0.62
PRPF40B-201ENST00000261897 ERCC4Q92889 916 aaPredicted RBP18.93■□□□□ 0.62
PRPF40B-201ENST00000261897 ZNF165P49910 485 aa18.93■□□□□ 0.62
PRPF40B-201ENST00000261897 CLEC17AQ6ZS10 378 aa18.93■□□□□ 0.62
PRPF40B-201ENST00000261897 G2E3Q7L622 706 aa18.93■□□□□ 0.62
PRPF40B-201ENST00000261897 GRIN2AQ12879 1464 aa18.93■□□□□ 0.62
PRPF40B-201ENST00000261897 KRT222Q8N1A0 295 aa18.93■□□□□ 0.62
PRPF40B-201ENST00000261897 CDK19Q9BWU1 502 aa18.93■□□□□ 0.62
PRPF40B-201ENST00000261897 ERCC6Q03468 1493 aa18.92■□□□□ 0.62
PRPF40B-201ENST00000261897 SPATA32Q96LK8 384 aa18.92■□□□□ 0.62
PRPF40B-201ENST00000261897 KRT85P78386 507 aa18.92■□□□□ 0.62
PRPF40B-201ENST00000261897 TIGD1Q96MW7 591 aa18.92■□□□□ 0.62
PRPF40B-201ENST00000261897 VGFO15240 615 aaPredicted RBP18.92■□□□□ 0.62
PRPF40B-201ENST00000261897 F13A1P00488 732 aa18.92■□□□□ 0.62
PRPF40B-201ENST00000261897 NCBP1Q09161 790 aaKnown RBP18.92■□□□□ 0.62
PRPF40B-201ENST00000261897 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
PRPF40B-201ENST00000261897 TYRO3Q06418 890 aa18.91■□□□□ 0.62
PRPF40B-201ENST00000261897 KCNF1Q9H3M0 494 aa18.91■□□□□ 0.62
PRPF40B-201ENST00000261897 ZNF215Q9UL58 517 aaPredicted RBP18.91■□□□□ 0.62
PRPF40B-201ENST00000261897 LRRFIP2Q9Y608 721 aaKnown RBP18.91■□□□□ 0.62
PRPF40B-201ENST00000261897 CHMLP26374 656 aa18.91■□□□□ 0.62
PRPF40B-201ENST00000261897 ARID5BQ14865 1188 aa18.91■□□□□ 0.62
PRPF40B-201ENST00000261897 WAPLQ7Z5K2 1190 aa18.91■□□□□ 0.62
PRPF40B-201ENST00000261897 EIF2AK4Q9P2K8 1649 aaKnown RBP18.9■□□□□ 0.62
PRPF40B-201ENST00000261897 MSH6P52701 1360 aa18.9■□□□□ 0.62
PRPF40B-201ENST00000261897 SMC2O95347 1197 aa18.9■□□□□ 0.62
PRPF40B-201ENST00000261897 COG3Q96JB2 828 aa18.9■□□□□ 0.62
PRPF40B-201ENST00000261897 PDRG1Q9NUG6 133 aa18.9■□□□□ 0.62
PRPF40B-201ENST00000261897 IL16Q14005 1332 aa18.9■□□□□ 0.62
PRPF40B-201ENST00000261897 TPM3P06753 285 aa18.9■□□□□ 0.62
PRPF40B-201ENST00000261897 LIMCH1Q9UPQ0 1083 aa18.89■□□□□ 0.62
PRPF40B-201ENST00000261897 ADCY10Q96PN6 1610 aa18.89■□□□□ 0.61
PRPF40B-201ENST00000261897 HTATSF1O43719 755 aaKnown RBP18.89■□□□□ 0.61
PRPF40B-201ENST00000261897 LIG1P18858 919 aa18.89■□□□□ 0.61
PRPF40B-201ENST00000261897 USP16Q9Y5T5 823 aa18.89■□□□□ 0.61
PRPF40B-201ENST00000261897 FAM200AQ8TCP9 573 aa18.89■□□□□ 0.61
PRPF40B-201ENST00000261897 UBTFL1P0CB47 393 aaPredicted RBP18.88■□□□□ 0.61
PRPF40B-201ENST00000261897 ZKSCAN1P17029 563 aaPredicted RBP18.88■□□□□ 0.61
PRPF40B-201ENST00000261897 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
PRPF40B-201ENST00000261897 AP5Z1O43299 807 aa18.88■□□□□ 0.61
PRPF40B-201ENST00000261897 HAP1P54257 671 aaPredicted RBP18.88■□□□□ 0.61
PRPF40B-201ENST00000261897 MNS1Q8NEH6 495 aa18.88■□□□□ 0.61
PRPF40B-201ENST00000261897 ARHGAP45Q92619 1136 aa18.88■□□□□ 0.61
PRPF40B-201ENST00000261897 A0A1W2PP64 1363 aa18.88■□□□□ 0.61
PRPF40B-201ENST00000261897 SKILP12757 684 aa18.88■□□□□ 0.61
PRPF40B-201ENST00000261897 CFAP65Q6ZU64 1925 aaKnown RBP18.87■□□□□ 0.61
PRPF40B-201ENST00000261897 SHANK2Q9UPX8 1470 aa18.87■□□□□ 0.61
PRPF40B-201ENST00000261897 ISM2Q6H9L7 571 aa18.87■□□□□ 0.61
PRPF40B-201ENST00000261897 FEZ1Q99689 392 aa18.87■□□□□ 0.61
PRPF40B-201ENST00000261897 NOL10Q9BSC4 688 aaKnown RBP18.87■□□□□ 0.61
PRPF40B-201ENST00000261897 PNMA6EA0A0J9YXQ4 647 aa18.87■□□□□ 0.61
PRPF40B-201ENST00000261897 NRDCO43847 1150 aa18.87■□□□□ 0.61
PRPF40B-201ENST00000261897 MLECQ14165 292 aa18.87■□□□□ 0.61
PRPF40B-201ENST00000261897 ZNF518AQ6AHZ1 1483 aa18.86■□□□□ 0.61
PRPF40B-201ENST00000261897 UGGT1Q9NYU2 1555 aa18.86■□□□□ 0.61
PRPF40B-201ENST00000261897 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
PRPF40B-201ENST00000261897 GUCY1B3Q02153 619 aa18.86■□□□□ 0.61
PRPF40B-201ENST00000261897 SDF4Q9BRK5 362 aa18.86■□□□□ 0.61
PRPF40B-201ENST00000261897 C14orf93Q9H972 538 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-201ENST00000261897 CBX8Q9HC52 389 aa18.86■□□□□ 0.61
PRPF40B-201ENST00000261897 CYP46A1Q9Y6A2 500 aa18.86■□□□□ 0.61
PRPF40B-201ENST00000261897 SMTNL1A8MU46 457 aa18.85■□□□□ 0.61
PRPF40B-201ENST00000261897 SRGAP3O43295 1099 aa18.85■□□□□ 0.61
PRPF40B-201ENST00000261897 TAF3Q5VWG9 929 aa18.85■□□□□ 0.61
PRPF40B-201ENST00000261897 NCKAP5LQ9HCH0 1330 aa18.85■□□□□ 0.61
PRPF40B-201ENST00000261897 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
PRPF40B-201ENST00000261897 STK11IPQ8N1F8 1099 aa18.85■□□□□ 0.61
PRPF40B-201ENST00000261897 BIN1O00499 593 aa18.84■□□□□ 0.61
PRPF40B-201ENST00000261897 LARGE1O95461 756 aa18.84■□□□□ 0.61
PRPF40B-201ENST00000261897 PAXIP1Q6ZW49 1069 aaPredicted RBP18.84■□□□□ 0.61
PRPF40B-201ENST00000261897 ZSWIM4Q9H7M6 989 aa18.84■□□□□ 0.61
PRPF40B-201ENST00000261897 RASEFQ8IZ41 740 aa18.84■□□□□ 0.61
PRPF40B-201ENST00000261897 ABCC4O15439 1325 aa18.83■□□□□ 0.61
PRPF40B-201ENST00000261897 FOXO3O43524 673 aa18.83■□□□□ 0.61
PRPF40B-201ENST00000261897 SF3A1Q15459 793 aaKnown RBP18.83■□□□□ 0.61
PRPF40B-201ENST00000261897 KIF18AQ8NI77 898 aa18.83■□□□□ 0.61
PRPF40B-201ENST00000261897 ADAMTS12P58397 1594 aa18.83■□□□□ 0.6
PRPF40B-201ENST00000261897 RAB11FIP3O75154 756 aa18.83■□□□□ 0.6
PRPF40B-201ENST00000261897 NEK11Q8NG66 645 aa18.83■□□□□ 0.6
PRPF40B-201ENST00000261897 CACTINQ8WUQ7 758 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms