RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 NAIPQ13075 1403 aa14.34□□□□□ -0.11
SPG11-201ENST00000261866 F8W031 263 aaPredicted RBP14.34□□□□□ -0.11
SPG11-201ENST00000261866 LRRFIP2Q9Y608 721 aaKnown RBP14.34□□□□□ -0.11
SPG11-201ENST00000261866 MAP3K2Q9Y2U5 619 aa14.33□□□□□ -0.11
SPG11-201ENST00000261866 WASLO00401 505 aaPredicted RBP14.33□□□□□ -0.12
SPG11-201ENST00000261866 CCDC173Q0VFZ6 552 aa14.33□□□□□ -0.12
SPG11-201ENST00000261866 VAT1LQ9HCJ6 419 aa14.33□□□□□ -0.12
SPG11-201ENST00000261866 PDE3AQ14432 1141 aa14.33□□□□□ -0.12
SPG11-201ENST00000261866 CCDC83Q8IWF9 413 aa14.33□□□□□ -0.12
SPG11-201ENST00000261866 SSR1P43307 286 aaKnown RBP14.33□□□□□ -0.12
SPG11-201ENST00000261866 NOL7Q9UMY1 257 aaKnown RBP14.33□□□□□ -0.12
SPG11-201ENST00000261866 A0A087WZG4 1122 aa14.33□□□□□ -0.12
SPG11-201ENST00000261866 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
SPG11-201ENST00000261866 RFC4P35249 363 aa14.32□□□□□ -0.12
SPG11-201ENST00000261866 IQSEC3Q9UPP2 1182 aaPredicted RBP14.32□□□□□ -0.12
SPG11-201ENST00000261866 CAMSAP2Q08AD1 1489 aa14.32□□□□□ -0.12
SPG11-201ENST00000261866 C20orf194Q5TEA3 1177 aa14.32□□□□□ -0.12
SPG11-201ENST00000261866 SMARCE1Q969G3 411 aa14.32□□□□□ -0.12
SPG11-201ENST00000261866 MAGI1Q96QZ7 1491 aaPredicted RBP14.32□□□□□ -0.12
SPG11-201ENST00000261866 PDCP20941 246 aa14.32□□□□□ -0.12
SPG11-201ENST00000261866 HSPA2P54652 639 aa14.32□□□□□ -0.12
SPG11-201ENST00000261866 SPATA32Q96LK8 384 aa14.32□□□□□ -0.12
SPG11-201ENST00000261866 WDR97A6NE52 1622 aa14.32□□□□□ -0.12
SPG11-201ENST00000261866 NOM1Q5C9Z4 860 aaKnown RBP14.32□□□□□ -0.12
SPG11-201ENST00000261866 ANKRD24Q8TF21 1146 aa14.32□□□□□ -0.12
SPG11-201ENST00000261866 SEC63Q9UGP8 760 aaKnown RBP14.31□□□□□ -0.12
SPG11-201ENST00000261866 EFCAB5A4FU69 1503 aa14.31□□□□□ -0.12
SPG11-201ENST00000261866 LARP1Q6PKG0 1096 aaKnown RBP14.31□□□□□ -0.12
SPG11-201ENST00000261866 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
SPG11-201ENST00000261866 UPF3BQ9BZI7 483 aaKnown RBP14.31□□□□□ -0.12
SPG11-201ENST00000261866 ANKRD1Q15327 319 aa14.31□□□□□ -0.12
SPG11-201ENST00000261866 TIAM1Q13009 1591 aa14.31□□□□□ -0.12
SPG11-201ENST00000261866 K7ELQ4 463 aaPredicted RBP14.31□□□□□ -0.12
SPG11-201ENST00000261866 NAPBQ9H115 298 aa14.31□□□□□ -0.12
SPG11-201ENST00000261866 TEX35Q5T0J7 233 aa14.3□□□□□ -0.12
SPG11-201ENST00000261866 FAM43AQ8N2R8 423 aa14.3□□□□□ -0.12
SPG11-201ENST00000261866 SSH1Q8WYL5 1049 aa14.3□□□□□ -0.12
SPG11-201ENST00000261866 CENPHQ9H3R5 247 aa14.3□□□□□ -0.12
SPG11-201ENST00000261866 ANKRD18BA2A2Z9 1011 aa14.3□□□□□ -0.12
SPG11-201ENST00000261866 PSMD1Q99460 953 aa14.3□□□□□ -0.12
SPG11-201ENST00000261866 NOS1P29475 1434 aa14.3□□□□□ -0.12
SPG11-201ENST00000261866 SLC39A6Q13433 755 aa14.3□□□□□ -0.12
SPG11-201ENST00000261866 MX1P20591 662 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 ENOX2Q16206 610 aaKnown RBP14.29□□□□□ -0.12
SPG11-201ENST00000261866 CTNNA3Q9UI47 895 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 SLC5A1P13866 664 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 CCT2P78371 535 aaKnown RBP14.29□□□□□ -0.12
SPG11-201ENST00000261866 TOP2BQ02880 1626 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 HAND2P61296 217 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 CCDC39Q9UFE4 941 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 CCDC141Q6ZP82 1450 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 ZNF444Q8N0Y2 327 aaPredicted RBP14.29□□□□□ -0.12
SPG11-201ENST00000261866 AKAP2Q9Y2D5 859 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 DNMBPQ6XZF7 1577 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 PPFIBP1Q86W92 1011 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
SPG11-201ENST00000261866 STIM1Q13586 685 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 AAMPQ13685 434 aa14.29□□□□□ -0.12
SPG11-201ENST00000261866 PCF11O94913 1555 aaKnown RBP14.28□□□□□ -0.12
SPG11-201ENST00000261866 ACEP12821 1306 aa14.28□□□□□ -0.12
SPG11-201ENST00000261866 IQGAP2Q13576 1575 aa14.28□□□□□ -0.12
SPG11-201ENST00000261866 SLFN5Q08AF3 891 aa14.28□□□□□ -0.12
SPG11-201ENST00000261866 CEP57L1Q8IYX8 460 aa14.28□□□□□ -0.12
SPG11-201ENST00000261866 ZNHIT6Q9NWK9 470 aaKnown RBP14.28□□□□□ -0.12
SPG11-201ENST00000261866 GOLIM4O00461 696 aa14.28□□□□□ -0.12
SPG11-201ENST00000261866 ATP6V1AP38606 617 aa14.28□□□□□ -0.12
SPG11-201ENST00000261866 DNAAF4Q8WXU2 420 aa14.28□□□□□ -0.12
SPG11-201ENST00000261866 KLHL10Q6JEL2 608 aa14.27□□□□□ -0.12
SPG11-201ENST00000261866 AEBP1Q8IUX7 1158 aa14.27□□□□□ -0.12
SPG11-201ENST00000261866 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.12
SPG11-201ENST00000261866 H0YHG0 523 aa14.27□□□□□ -0.12
SPG11-201ENST00000261866 CDKL5O76039 1030 aa14.27□□□□□ -0.12
SPG11-201ENST00000261866 AMOTQ4VCS5 1084 aa14.27□□□□□ -0.12
SPG11-201ENST00000261866 MCM2P49736 904 aa14.27□□□□□ -0.13
SPG11-201ENST00000261866 FAM193AP78312 1265 aa14.27□□□□□ -0.13
SPG11-201ENST00000261866 KRT85P78386 507 aa14.27□□□□□ -0.13
SPG11-201ENST00000261866 FAM135AQ9P2D6 1515 aa14.27□□□□□ -0.13
SPG11-201ENST00000261866 KIF1BPQ96EK5 621 aa14.27□□□□□ -0.13
SPG11-201ENST00000261866 KIF14Q15058 1648 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 RBM26Q5T8P6 1007 aaKnown RBP14.26□□□□□ -0.13
SPG11-201ENST00000261866 FEZ1Q99689 392 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
SPG11-201ENST00000261866 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 NEBLO76041 1014 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 UBE3BQ7Z3V4 1068 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 HSP90AB3PQ58FF7 597 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 ARGLU1Q9NWB6 273 aaPredicted RBP14.26□□□□□ -0.13
SPG11-201ENST00000261866 LETM1O95202 739 aaPredicted RBP14.26□□□□□ -0.13
SPG11-201ENST00000261866 MAP3K12Q12852 859 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 TAX1BP1Q86VP1 789 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 JAG2Q9Y219 1238 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 HSP90B2PQ58FF3 399 aa14.26□□□□□ -0.13
SPG11-201ENST00000261866 NBPF6Q5VWK0 638 aa14.25□□□□□ -0.13
SPG11-201ENST00000261866 DDX46Q7L014 1031 aaKnown RBP14.25□□□□□ -0.13
SPG11-201ENST00000261866 NBPF5PQ86XG9 351 aaPredicted RBP14.25□□□□□ -0.13
SPG11-201ENST00000261866 NBPF4Q96M43 638 aa14.25□□□□□ -0.13
SPG11-201ENST00000261866 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms