RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 KDM6AO15550 1401 aaPredicted RBP21.47■■□□□ 1.03
HLA-F-216ENST00000259951 BTBD11A6QL63 1104 aa21.47■■□□□ 1.03
HLA-F-216ENST00000259951 SOCS7O14512 581 aa21.47■■□□□ 1.03
HLA-F-216ENST00000259951 IPO8O15397 1037 aaKnown RBP21.47■■□□□ 1.03
HLA-F-216ENST00000259951 NGLY1Q96IV0 654 aa21.47■■□□□ 1.03
HLA-F-216ENST00000259951 ZKSCAN2Q63HK3 967 aa21.46■■□□□ 1.03
HLA-F-216ENST00000259951 CHMP4AQ9BY43 222 aa21.46■■□□□ 1.03
HLA-F-216ENST00000259951 MRC1P22897 1456 aa21.45■■□□□ 1.02
HLA-F-216ENST00000259951 UNC5CLQ8IV45 518 aa21.45■■□□□ 1.02
HLA-F-216ENST00000259951 SPATA31A1Q5TZJ5 1347 aa21.45■■□□□ 1.02
HLA-F-216ENST00000259951 CACNA1FO60840 1977 aa21.45■■□□□ 1.02
HLA-F-216ENST00000259951 NKX1-1Q15270 411 aaPredicted RBP21.44■■□□□ 1.02
HLA-F-216ENST00000259951 C8orf37Q96NL8 207 aa21.44■■□□□ 1.02
HLA-F-216ENST00000259951 SLC52A2Q9HAB3 445 aa21.44■■□□□ 1.02
HLA-F-216ENST00000259951 SPATA31A5Q5VU36 1347 aa21.43■■□□□ 1.02
HLA-F-216ENST00000259951 SPATA31A7Q8IWB4 1347 aa21.43■■□□□ 1.02
HLA-F-216ENST00000259951 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.43■■□□□ 1.02
HLA-F-216ENST00000259951 LRP6O75581 1613 aa21.43■■□□□ 1.02
HLA-F-216ENST00000259951 C20orf194Q5TEA3 1177 aa21.43■■□□□ 1.02
HLA-F-216ENST00000259951 CRBNQ96SW2 442 aa21.43■■□□□ 1.02
HLA-F-216ENST00000259951 KRT24Q2M2I5 525 aa21.42■■□□□ 1.02
HLA-F-216ENST00000259951 FNBP4Q8N3X1 1017 aaPredicted RBP21.42■■□□□ 1.02
HLA-F-216ENST00000259951 MRPL50Q8N5N7 158 aaKnown RBP21.42■■□□□ 1.02
HLA-F-216ENST00000259951 EXOC6Q8TAG9 804 aa21.42■■□□□ 1.02
HLA-F-216ENST00000259951 ERVV-2B6SEH9 535 aa21.41■■□□□ 1.02
HLA-F-216ENST00000259951 HOXB7P09629 217 aa21.41■■□□□ 1.02
HLA-F-216ENST00000259951 MEX3CQ5U5Q3 659 aaKnown RBP21.41■■□□□ 1.02
HLA-F-216ENST00000259951 DDX54Q8TDD1 881 aaKnown RBP21.41■■□□□ 1.02
HLA-F-216ENST00000259951 ARHGAP45Q92619 1136 aa21.41■■□□□ 1.02
HLA-F-216ENST00000259951 EXOC5O00471 708 aa21.4■■□□□ 1.02
HLA-F-216ENST00000259951 CABP4P57796 275 aa21.4■■□□□ 1.02
HLA-F-216ENST00000259951 EIF4A1P60842 406 aaKnown RBP21.4■■□□□ 1.02
HLA-F-216ENST00000259951 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
HLA-F-216ENST00000259951 NOB1Q9ULX3 412 aaKnown RBP21.4■■□□□ 1.02
HLA-F-216ENST00000259951 CCDC9Q9Y3X0 531 aaKnown RBP21.4■■□□□ 1.02
HLA-F-216ENST00000259951 VPS72Q15906 364 aa21.4■■□□□ 1.02
HLA-F-216ENST00000259951 BARGINQ6ZT62 677 aa21.4■■□□□ 1.02
HLA-F-216ENST00000259951 FTSJ3Q8IY81 847 aaKnown RBP21.4■■□□□ 1.02
HLA-F-216ENST00000259951 BCL9LQ86UU0 1499 aa21.39■■□□□ 1.01
HLA-F-216ENST00000259951 CCDC30Q5VVM6 783 aa21.39■■□□□ 1.01
HLA-F-216ENST00000259951 DZIP1LQ8IYY4 767 aaKnown RBP21.39■■□□□ 1.01
HLA-F-216ENST00000259951 NFATC2IPQ8NCF5 419 aa21.39■■□□□ 1.01
HLA-F-216ENST00000259951 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
HLA-F-216ENST00000259951 POTEAQ6S8J7 498 aa21.38■■□□□ 1.01
HLA-F-216ENST00000259951 STK31Q9BXU1 1019 aa21.38■■□□□ 1.01
HLA-F-216ENST00000259951 AAMPQ13685 434 aa21.37■■□□□ 1.01
HLA-F-216ENST00000259951 USP21Q9UK80 565 aa21.37■■□□□ 1.01
HLA-F-216ENST00000259951 TRIM27P14373 513 aa21.36■■□□□ 1.01
HLA-F-216ENST00000259951 ZNF790Q6PG37 636 aa21.36■■□□□ 1.01
HLA-F-216ENST00000259951 PANK1Q8TE04 598 aa21.36■■□□□ 1.01
HLA-F-216ENST00000259951 API5Q9BZZ5 524 aaKnown RBP21.36■■□□□ 1.01
HLA-F-216ENST00000259951 TTC5Q8N0Z6 440 aa21.35■■□□□ 1.01
HLA-F-216ENST00000259951 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
HLA-F-216ENST00000259951 KCNQ3O43525 872 aa21.34■■□□□ 1.01
HLA-F-216ENST00000259951 DDB1Q16531 1140 aa21.34■■□□□ 1.01
HLA-F-216ENST00000259951 CCDC136Q96JN2 1154 aa21.34■■□□□ 1.01
HLA-F-216ENST00000259951 HEG1Q9ULI3 1381 aa21.34■■□□□ 1.01
HLA-F-216ENST00000259951 PTPRCP08575 1304 aa21.34■■□□□ 1.01
HLA-F-216ENST00000259951 HDGFL1Q5TGJ6 251 aa21.33■■□□□ 1.01
HLA-F-216ENST00000259951 CLUAP1Q96AJ1 413 aa21.33■■□□□ 1.01
HLA-F-216ENST00000259951 SLC4A2P04920 1241 aa21.33■■□□□ 1
HLA-F-216ENST00000259951 COG6Q9Y2V7 657 aa21.33■■□□□ 1
HLA-F-216ENST00000259951 TOGARAM1Q9Y4F4 1720 aa21.32■■□□□ 1
HLA-F-216ENST00000259951 MVPQ14764 893 aaKnown RBP21.32■■□□□ 1
HLA-F-216ENST00000259951 ITGB4P16144 1822 aa21.31■■□□□ 1
HLA-F-216ENST00000259951 GIGYF1O75420 1035 aaPredicted RBP21.31■■□□□ 1
HLA-F-216ENST00000259951 RLBP1P12271 317 aa21.31■■□□□ 1
HLA-F-216ENST00000259951 ZNF772Q68DY9 489 aaPredicted RBP21.31■■□□□ 1
HLA-F-216ENST00000259951 PAPPAQ13219 1627 aa21.31■■□□□ 1
HLA-F-216ENST00000259951 SLC39A6Q13433 755 aa21.3■■□□□ 1
HLA-F-216ENST00000259951 FMNL2Q96PY5 1086 aa21.3■■□□□ 1
HLA-F-216ENST00000259951 TMOD3Q9NYL9 352 aa21.3■■□□□ 1
HLA-F-216ENST00000259951 B4GALNT3Q6L9W6 998 aa21.29■■□□□ 1
HLA-F-216ENST00000259951 CHMP4BQ9H444 224 aaKnown RBP21.29■■□□□ 1
HLA-F-216ENST00000259951 DDX19BQ9UMR2 479 aa21.29■■□□□ 1
HLA-F-216ENST00000259951 TNNQ9UQP3 1299 aa21.29■■□□□ 1
HLA-F-216ENST00000259951 UBR2Q8IWV8 1755 aa21.29■■□□□ 1
HLA-F-216ENST00000259951 AFF2P51816 1311 aa21.29■■□□□ 1
HLA-F-216ENST00000259951 KAT6BQ8WYB5 2073 aa21.29■■□□□ 1
HLA-F-216ENST00000259951 ABCC4O15439 1325 aa21.28■■□□□ 1
HLA-F-216ENST00000259951 EIF2S2P20042 333 aaKnown RBP21.27■■□□□ 1
HLA-F-216ENST00000259951 FAM98CQ17RN3 349 aaKnown RBP21.27■■□□□ 1
HLA-F-216ENST00000259951 ITPRIPQ8IWB1 547 aa21.27■■□□□ 1
HLA-F-216ENST00000259951 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
HLA-F-216ENST00000259951 PELP1Q8IZL8 1130 aaKnown RBP21.26■□□□□ 0.99
HLA-F-216ENST00000259951 NECTIN2Q92692 538 aa21.26■□□□□ 0.99
HLA-F-216ENST00000259951 ZNF496Q96IT1 587 aaPredicted RBP21.26■□□□□ 0.99
HLA-F-216ENST00000259951 C5P01031 1676 aa21.26■□□□□ 0.99
HLA-F-216ENST00000259951 TMEM57Q8N5G2 664 aa21.26■□□□□ 0.99
HLA-F-216ENST00000259951 DBF4Q9UBU7 674 aaPredicted RBP21.26■□□□□ 0.99
HLA-F-216ENST00000259951 TRPC5Q9UL62 973 aaPredicted RBP21.26■□□□□ 0.99
HLA-F-216ENST00000259951 DOT1LQ8TEK3 1739 aa21.25■□□□□ 0.99
HLA-F-216ENST00000259951 LAMB4A4D0S4 1761 aa21.25■□□□□ 0.99
HLA-F-216ENST00000259951 ATRNO75882 1429 aa21.24■□□□□ 0.99
HLA-F-216ENST00000259951 FLIIQ13045 1269 aa21.24■□□□□ 0.99
HLA-F-216ENST00000259951 THSD7AQ9UPZ6 1657 aa21.23■□□□□ 0.99
HLA-F-216ENST00000259951 GJD4Q96KN9 370 aaPredicted RBP21.23■□□□□ 0.99
HLA-F-216ENST00000259951 MARCH10Q8NA82 808 aaPredicted RBP21.22■□□□□ 0.99
HLA-F-216ENST00000259951 CHPF2Q9P2E5 772 aa21.22■□□□□ 0.99
HLA-F-216ENST00000259951 BCL9O00512 1426 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms