RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 ADAMTS7Q9UKP4 1686 aa27.39■■□□□ 1.97
CFC1-201ENST00000259216 ARXQ96QS3 562 aa27.38■■□□□ 1.97
CFC1-201ENST00000259216 C1orf141Q5JVX7 400 aa27.37■■□□□ 1.97
CFC1-201ENST00000259216 SYT17Q9BSW7 474 aa27.37■■□□□ 1.97
CFC1-201ENST00000259216 HMGB2P26583 209 aaKnown RBP27.36■■□□□ 1.97
CFC1-201ENST00000259216 MRC1P22897 1456 aa27.36■■□□□ 1.97
CFC1-201ENST00000259216 CABP4P57796 275 aa27.35■■□□□ 1.97
CFC1-201ENST00000259216 AKAP4Q5JQC9 854 aa27.35■■□□□ 1.97
CFC1-201ENST00000259216 PPP2R1AP30153 589 aa27.34■■□□□ 1.97
CFC1-201ENST00000259216 SMIM5Q71RC9 77 aa27.34■■□□□ 1.97
CFC1-201ENST00000259216 COL5A3P25940 1745 aaPredicted RBP27.33■■□□□ 1.97
CFC1-201ENST00000259216 MTHFSDQ2M296 383 aaKnown RBP27.33■■□□□ 1.97
CFC1-201ENST00000259216 CICQ96RK0 1608 aaPredicted RBP27.32■■□□□ 1.96
CFC1-201ENST00000259216 ATP6V1AP38606 617 aa27.32■■□□□ 1.96
CFC1-201ENST00000259216 NFATC2IPQ8NCF5 419 aa27.32■■□□□ 1.96
CFC1-201ENST00000259216 FLAD1Q8NFF5 587 aa27.32■■□□□ 1.96
CFC1-201ENST00000259216 AK7Q96M32 723 aa27.31■■□□□ 1.96
CFC1-201ENST00000259216 LGR6Q9HBX8 967 aa27.31■■□□□ 1.96
CFC1-201ENST00000259216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.29■■□□□ 1.96
CFC1-201ENST00000259216 VIRMAQ69YN4 1812 aaKnown RBP27.29■■□□□ 1.96
CFC1-201ENST00000259216 RNMTO43148 476 aaKnown RBP27.28■■□□□ 1.96
CFC1-201ENST00000259216 SSFA2P28290 1259 aa27.28■■□□□ 1.96
CFC1-201ENST00000259216 U2SURPO15042 1029 aaKnown RBP27.27■■□□□ 1.96
CFC1-201ENST00000259216 POLD1P28340 1107 aa27.27■■□□□ 1.96
CFC1-201ENST00000259216 MSL1Q68DK7 614 aa27.27■■□□□ 1.96
CFC1-201ENST00000259216 SLC52A2Q9HAB3 445 aa27.27■■□□□ 1.96
CFC1-201ENST00000259216 TJP1Q07157 1748 aa27.27■■□□□ 1.96
CFC1-201ENST00000259216 MSH5O43196 834 aa27.26■■□□□ 1.95
CFC1-201ENST00000259216 MYH14Q7Z406 1995 aaKnown RBP27.26■■□□□ 1.95
CFC1-201ENST00000259216 CNTNAP4Q9C0A0 1308 aa27.25■■□□□ 1.95
CFC1-201ENST00000259216 GNPATO15228 680 aa27.25■■□□□ 1.95
CFC1-201ENST00000259216 RBM42Q9BTD8 480 aaKnown RBP27.25■■□□□ 1.95
CFC1-201ENST00000259216 RSPH6AQ9H0K4 717 aa27.25■■□□□ 1.95
CFC1-201ENST00000259216 PHF14O94880 888 aa27.24■■□□□ 1.95
CFC1-201ENST00000259216 RC3H1Q5TC82 1133 aaKnown RBP27.24■■□□□ 1.95
CFC1-201ENST00000259216 CFAP53Q96M91 514 aa27.24■■□□□ 1.95
CFC1-201ENST00000259216 KCPQ6ZWJ8 1503 aa27.22■■□□□ 1.95
CFC1-201ENST00000259216 PTCD1O75127 700 aaKnown RBP27.22■■□□□ 1.95
CFC1-201ENST00000259216 PHACTR3Q96KR7 559 aa27.22■■□□□ 1.95
CFC1-201ENST00000259216 PRKAR2BP31323 418 aa27.19■■□□□ 1.94
CFC1-201ENST00000259216 IL17REQ8NFR9 667 aa27.19■■□□□ 1.94
CFC1-201ENST00000259216 NLGN2Q8NFZ4 835 aa27.19■■□□□ 1.94
CFC1-201ENST00000259216 SIPA1L3O60292 1781 aaPredicted RBP27.18■■□□□ 1.94
CFC1-201ENST00000259216 UBR2Q8IWV8 1755 aa27.18■■□□□ 1.94
CFC1-201ENST00000259216 RPS6KA4O75676 772 aa27.17■■□□□ 1.94
CFC1-201ENST00000259216 SLC39A6Q13433 755 aa27.17■■□□□ 1.94
CFC1-201ENST00000259216 GAS2L2Q8NHY3 880 aa27.17■■□□□ 1.94
CFC1-201ENST00000259216 C4AP0C0L4 1744 aa27.16■■□□□ 1.94
CFC1-201ENST00000259216 RTCBQ9Y3I0 505 aaKnown RBP27.16■■□□□ 1.94
CFC1-201ENST00000259216 CEMIPQ8WUJ3 1361 aa27.16■■□□□ 1.94
CFC1-201ENST00000259216 ADRA2BP18089 450 aa27.15■■□□□ 1.94
CFC1-201ENST00000259216 CRKLP46109 303 aaKnown RBP27.15■■□□□ 1.94
CFC1-201ENST00000259216 NUDCQ9Y266 331 aa27.15■■□□□ 1.94
CFC1-201ENST00000259216 GNAT3A8MTJ3 354 aa27.14■■□□□ 1.94
CFC1-201ENST00000259216 INTS5Q6P9B9 1019 aaKnown RBP27.14■■□□□ 1.94
CFC1-201ENST00000259216 ARHGEF1Q92888 912 aaKnown RBP27.14■■□□□ 1.94
CFC1-201ENST00000259216 U2AF1L5P0DN76 240 aaPredicted RBP27.13■■□□□ 1.93
CFC1-201ENST00000259216 U2AF1Q01081 240 aaKnown RBP eCLIP27.13■■□□□ 1.93
CFC1-201ENST00000259216 DNAJC10Q8IXB1 793 aa27.13■■□□□ 1.93
CFC1-201ENST00000259216 KLHL34Q8N239 644 aa27.13■■□□□ 1.93
CFC1-201ENST00000259216 DCAF8L1A6NGE4 600 aa27.12■■□□□ 1.93
CFC1-201ENST00000259216 FCHSD2O94868 740 aa27.12■■□□□ 1.93
CFC1-201ENST00000259216 TRAPPC3LQ5T215 181 aa27.12■■□□□ 1.93
CFC1-201ENST00000259216 CD2APQ9Y5K6 639 aa27.11■■□□□ 1.93
CFC1-201ENST00000259216 CYP19A1P11511 503 aaPredicted RBP27.09■■□□□ 1.93
CFC1-201ENST00000259216 GYS1P13807 737 aa27.08■■□□□ 1.93
CFC1-201ENST00000259216 YY1P25490 414 aa27.08■■□□□ 1.93
CFC1-201ENST00000259216 DDX10Q13206 875 aaKnown RBP27.07■■□□□ 1.92
CFC1-201ENST00000259216 VSIG10Q8N0Z9 540 aa27.07■■□□□ 1.92
CFC1-201ENST00000259216 MMP10P09238 476 aa27.06■■□□□ 1.92
CFC1-201ENST00000259216 CCDC87Q9NVE4 849 aa27.06■■□□□ 1.92
CFC1-201ENST00000259216 SOS1Q07889 1333 aaPredicted RBP27.06■■□□□ 1.92
CFC1-201ENST00000259216 ZNF496Q96IT1 587 aaPredicted RBP27.05■■□□□ 1.92
CFC1-201ENST00000259216 YBX3P16989 372 aaKnown RBP eCLIP27.04■■□□□ 1.92
CFC1-201ENST00000259216 TEFQ10587 303 aa27.04■■□□□ 1.92
CFC1-201ENST00000259216 ZNF790Q6PG37 636 aa27.04■■□□□ 1.92
CFC1-201ENST00000259216 NLGN1Q8N2Q7 840 aa27.04■■□□□ 1.92
CFC1-201ENST00000259216 USP42Q9H9J4 1324 aaKnown RBP27.04■■□□□ 1.92
CFC1-201ENST00000259216 UTRNP46939 3433 aa27.03■■□□□ 1.92
CFC1-201ENST00000259216 RFC4P35249 363 aa27.03■■□□□ 1.92
CFC1-201ENST00000259216 PLEKHF1Q96S99 279 aa27.03■■□□□ 1.92
CFC1-201ENST00000259216 KIF13BQ9NQT8 1826 aa27.03■■□□□ 1.92
CFC1-201ENST00000259216 SRP68Q9UHB9 627 aaKnown RBP27.03■■□□□ 1.92
CFC1-201ENST00000259216 KIAA1551Q9HCM1 1747 aa27.02■■□□□ 1.92
CFC1-201ENST00000259216 HEG1Q9ULI3 1381 aa27.02■■□□□ 1.92
CFC1-201ENST00000259216 RALBP1Q15311 655 aa27.02■■□□□ 1.92
CFC1-201ENST00000259216 CHD4Q14839 1912 aa27.01■■□□□ 1.91
CFC1-201ENST00000259216 GPR162Q16538 588 aa27.01■■□□□ 1.91
CFC1-201ENST00000259216 ZBTB1Q9Y2K1 713 aa27.01■■□□□ 1.91
CFC1-201ENST00000259216 C10orf71Q711Q0 1435 aa27■■□□□ 1.91
CFC1-201ENST00000259216 KCNQ3O43525 872 aa27■■□□□ 1.91
CFC1-201ENST00000259216 MCM10Q7L590 875 aa26.99■■□□□ 1.91
CFC1-201ENST00000259216 GOLGB1Q14789 3259 aaKnown RBP26.99■■□□□ 1.91
CFC1-201ENST00000259216 FKBP8Q14318 412 aa26.98■■□□□ 1.91
CFC1-201ENST00000259216 TTC5Q8N0Z6 440 aa26.98■■□□□ 1.91
CFC1-201ENST00000259216 HTATSF1O43719 755 aaKnown RBP26.97■■□□□ 1.91
CFC1-201ENST00000259216 DCTN1Q14203 1278 aa26.97■■□□□ 1.91
CFC1-201ENST00000259216 COL15A1P39059 1388 aa26.97■■□□□ 1.91
CFC1-201ENST00000259216 DLG5Q8TDM6 1919 aa26.96■■□□□ 1.91
CFC1-201ENST00000259216 PXDNLA1KZ92 1463 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms