RNA–Protein interactions for RNA: ENST00000256497.8

EDEM1-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDEM1, Length 6,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-201ENST00000256497 LUZP1Q86V48 1076 aa21.29■■□□□ 1
EDEM1-201ENST00000256497 ZNF397Q8NF99 534 aaPredicted RBP21.29■■□□□ 1
EDEM1-201ENST00000256497 SRRTQ9BXP5 876 aaKnown RBP21.29■■□□□ 1
EDEM1-201ENST00000256497 PAXBP1Q9Y5B6 917 aa21.29■■□□□ 1
EDEM1-201ENST00000256497 TTC39AQ5SRH9 613 aa21.28■■□□□ 1
EDEM1-201ENST00000256497 CABP1Q9NZU7 370 aa21.28■■□□□ 1
EDEM1-201ENST00000256497 CCDC175P0C221 793 aa21.28■■□□□ 1
EDEM1-201ENST00000256497 DNA2P51530 1060 aa21.28■■□□□ 1
EDEM1-201ENST00000256497 NUP133Q8WUM0 1156 aa21.28■■□□□ 1
EDEM1-201ENST00000256497 RRBP1Q9P2E9 1410 aaKnown RBP21.28■■□□□ 1
EDEM1-201ENST00000256497 NOL7Q9UMY1 257 aaKnown RBP21.28■■□□□ 1
EDEM1-201ENST00000256497 XRCC6P12956 609 aaKnown RBP eCLIP21.28■■□□□ 1
EDEM1-201ENST00000256497 PANK2Q9BZ23 570 aa21.28■■□□□ 1
EDEM1-201ENST00000256497 SIL1Q9H173 461 aa21.28■■□□□ 1
EDEM1-201ENST00000256497 SMC1AQ14683 1233 aaKnown RBP21.28■■□□□ 1
EDEM1-201ENST00000256497 C9orf84Q5VXU9 1444 aa21.27■■□□□ 1
EDEM1-201ENST00000256497 CCDC94Q9BW85 323 aaPredicted RBP21.27■■□□□ 1
EDEM1-201ENST00000256497 GDPD2Q9HCC8 539 aa21.27■■□□□ 1
EDEM1-201ENST00000256497 ZSCAN23Q3MJ62 389 aa21.27■■□□□ 1
EDEM1-201ENST00000256497 TMC6Q7Z403 805 aa21.27■■□□□ 1
EDEM1-201ENST00000256497 SRCIN1Q9C0H9 1055 aa21.27■■□□□ 1
EDEM1-201ENST00000256497 CCDC178Q5BJE1 867 aa21.27■■□□□ 1
EDEM1-201ENST00000256497 ATP2C2O75185 946 aa21.26■□□□□ 0.99
EDEM1-201ENST00000256497 IGSF3O75054 1194 aa21.26■□□□□ 0.99
EDEM1-201ENST00000256497 ZSWIM4Q9H7M6 989 aa21.26■□□□□ 0.99
EDEM1-201ENST00000256497 LIG1P18858 919 aa21.26■□□□□ 0.99
EDEM1-201ENST00000256497 CPLX3Q8WVH0 158 aa21.26■□□□□ 0.99
EDEM1-201ENST00000256497 C11orf95C9JLR9 678 aaPredicted RBP21.25■□□□□ 0.99
EDEM1-201ENST00000256497 CCT4P50991 539 aaKnown RBP21.25■□□□□ 0.99
EDEM1-201ENST00000256497 KLHL10Q6JEL2 608 aa21.25■□□□□ 0.99
EDEM1-201ENST00000256497 ZNF526Q8TF50 670 aaPredicted RBP21.25■□□□□ 0.99
EDEM1-201ENST00000256497 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
EDEM1-201ENST00000256497 UBE4AQ14139 1066 aa21.25■□□□□ 0.99
EDEM1-201ENST00000256497 STAC3Q96MF2 364 aa21.25■□□□□ 0.99
EDEM1-201ENST00000256497 TMEM132AQ24JP5 1023 aa21.25■□□□□ 0.99
EDEM1-201ENST00000256497 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
EDEM1-201ENST00000256497 GSDMDP57764 484 aa21.25■□□□□ 0.99
EDEM1-201ENST00000256497 C20orf194Q5TEA3 1177 aa21.25■□□□□ 0.99
EDEM1-201ENST00000256497 DDX54Q8TDD1 881 aaKnown RBP21.25■□□□□ 0.99
EDEM1-201ENST00000256497 CEP63Q96MT8 703 aa21.25■□□□□ 0.99
EDEM1-201ENST00000256497 NOLC1Q14978 699 aaKnown RBP eCLIP21.24■□□□□ 0.99
EDEM1-201ENST00000256497 CDKL5O76039 1030 aa21.24■□□□□ 0.99
EDEM1-201ENST00000256497 THEMISQ8N1K5 641 aaPredicted RBP21.24■□□□□ 0.99
EDEM1-201ENST00000256497 IVLP07476 585 aa21.24■□□□□ 0.99
EDEM1-201ENST00000256497 PIP4K2BP78356 416 aa21.24■□□□□ 0.99
EDEM1-201ENST00000256497 SCAND2PQ9GZW5 306 aaPredicted RBP21.24■□□□□ 0.99
EDEM1-201ENST00000256497 IL1RAPL2Q9NP60 686 aa21.23■□□□□ 0.99
EDEM1-201ENST00000256497 WDR63Q8IWG1 891 aa21.23■□□□□ 0.99
EDEM1-201ENST00000256497 BAG4O95429 457 aaKnown RBP21.23■□□□□ 0.99
EDEM1-201ENST00000256497 CCDC158Q5M9N0 1113 aa21.23■□□□□ 0.99
EDEM1-201ENST00000256497 PDIA4P13667 645 aaKnown RBP21.22■□□□□ 0.99
EDEM1-201ENST00000256497 AACSQ86V21 672 aa21.22■□□□□ 0.99
EDEM1-201ENST00000256497 MICALL1Q8N3F8 863 aa21.22■□□□□ 0.99
EDEM1-201ENST00000256497 GCOM1H8Y6P7 765 aaPredicted RBP21.22■□□□□ 0.99
EDEM1-201ENST00000256497 SSBP05455 408 aaKnown RBP eCLIP21.22■□□□□ 0.99
EDEM1-201ENST00000256497 SLC3A2P08195 630 aaKnown RBP21.22■□□□□ 0.99
EDEM1-201ENST00000256497 MYZAPP0CAP1 466 aa21.22■□□□□ 0.99
EDEM1-201ENST00000256497 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
EDEM1-201ENST00000256497 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
EDEM1-201ENST00000256497 MAATS1Q7Z4T9 603 aa21.22■□□□□ 0.99
EDEM1-201ENST00000256497 PAFAH1B1P43034 410 aa21.21■□□□□ 0.99
EDEM1-201ENST00000256497 SPECC1Q5M775 1068 aa21.21■□□□□ 0.99
EDEM1-201ENST00000256497 NUP88Q99567 741 aaPredicted RBP21.21■□□□□ 0.99
EDEM1-201ENST00000256497 NBPF8Q3BBV2 869 aa21.21■□□□□ 0.99
EDEM1-201ENST00000256497 TMEM57Q8N5G2 664 aa21.21■□□□□ 0.99
EDEM1-201ENST00000256497 SSR1P43307 286 aaKnown RBP21.21■□□□□ 0.99
EDEM1-201ENST00000256497 KLHL40Q2TBA0 621 aa21.21■□□□□ 0.99
EDEM1-201ENST00000256497 TTC31Q49AM3 519 aaPredicted RBP21.21■□□□□ 0.99
EDEM1-201ENST00000256497 GIGYF2Q6Y7W6 1299 aaKnown RBP21.21■□□□□ 0.99
EDEM1-201ENST00000256497 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.21■□□□□ 0.992e-6■■■□□ 16.9
EDEM1-201ENST00000256497 UVSSAQ2YD98 709 aa21.21■□□□□ 0.99
EDEM1-201ENST00000256497 HLTFQ14527 1009 aaKnown RBP eCLIP21.2■□□□□ 0.983e-6■■□□□ 13.4
EDEM1-201ENST00000256497 CCDC57Q2TAC2 916 aa21.2■□□□□ 0.98
EDEM1-201ENST00000256497 PLEKHO1Q53GL0 409 aaPredicted RBP21.2■□□□□ 0.98
EDEM1-201ENST00000256497 KRT32Q14532 448 aa21.2■□□□□ 0.98
EDEM1-201ENST00000256497 TOM1L2Q6ZVM7 507 aa21.2■□□□□ 0.98
EDEM1-201ENST00000256497 PPP1R1BQ9UD71 204 aaPredicted RBP21.2■□□□□ 0.98
EDEM1-201ENST00000256497 PAF1Q8N7H5 531 aa21.19■□□□□ 0.98
EDEM1-201ENST00000256497 HSPA4P34932 840 aa21.19■□□□□ 0.98
EDEM1-201ENST00000256497 SPECC1LQ69YQ0 1117 aa21.19■□□□□ 0.98
EDEM1-201ENST00000256497 NUTM1Q86Y26 1132 aa21.19■□□□□ 0.98
EDEM1-201ENST00000256497 CCDC12Q8WUD4 166 aaPredicted RBP21.19■□□□□ 0.98
EDEM1-201ENST00000256497 LRSAM1Q6UWE0 723 aa21.19■□□□□ 0.98
EDEM1-201ENST00000256497 GAS2L2Q8NHY3 880 aa21.19■□□□□ 0.98
EDEM1-201ENST00000256497 PRPF40BQ6NWY9 871 aaKnown RBP21.18■□□□□ 0.98
EDEM1-201ENST00000256497 PLEKHH1Q9ULM0 1364 aa21.18■□□□□ 0.98
EDEM1-201ENST00000256497 GNG11P61952 73 aa21.18■□□□□ 0.98
EDEM1-201ENST00000256497 RRS1Q15050 365 aaKnown RBP21.18■□□□□ 0.98
EDEM1-201ENST00000256497 CCDC171Q6TFL3 1326 aa21.18■□□□□ 0.98
EDEM1-201ENST00000256497 CTAGE5O15320 804 aa21.18■□□□□ 0.98
EDEM1-201ENST00000256497 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.18■□□□□ 0.98
EDEM1-201ENST00000256497 V9GYY5 206 aaPredicted RBP21.18■□□□□ 0.98
EDEM1-201ENST00000256497 SMARCA5O60264 1052 aaPredicted RBP21.17■□□□□ 0.98
EDEM1-201ENST00000256497 HCLS1P14317 486 aaPredicted RBP21.17■□□□□ 0.98
EDEM1-201ENST00000256497 SLFN5Q08AF3 891 aa21.17■□□□□ 0.98
EDEM1-201ENST00000256497 STX1AQ16623 288 aa21.17■□□□□ 0.98
EDEM1-201ENST00000256497 GSTTP1A0A1W2PQM5 241 aa21.17■□□□□ 0.98
EDEM1-201ENST00000256497 C10orf67Q8IYJ2 551 aa21.17■□□□□ 0.98
EDEM1-201ENST00000256497 DDX19AQ9NUU7 478 aaKnown RBP21.17■□□□□ 0.98
EDEM1-201ENST00000256497 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms